RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
SHKBP1-203ENST00000594298 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
SHKBP1-203ENST00000594298 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
SHKBP1-203ENST00000594298 IMUPQ9GZP8 106 aa8.14□□□□□ -1.11
SHKBP1-203ENST00000594298 LCA10Q71F78 164 aa8.12□□□□□ -1.11
SHKBP1-203ENST00000594298 NEBP20929 6669 aa8.11□□□□□ -1.11
SHKBP1-203ENST00000594298 H3BPC8 53 aa8.1□□□□□ -1.11
SHKBP1-203ENST00000594298 A8MUN3 132 aa8.07□□□□□ -1.12
SHKBP1-203ENST00000594298 MT-ATP8P03928 68 aa8.05□□□□□ -1.12
SHKBP1-203ENST00000594298 KLKP1Q107X0 134 aa8.04□□□□□ -1.12
SHKBP1-203ENST00000594298 FAM236AA0A1B0GUQ0 79 aa8.03□□□□□ -1.12
SHKBP1-203ENST00000594298 FAM236BA0A1B0GV22 79 aa8.03□□□□□ -1.12
SHKBP1-203ENST00000594298 SMIM20Q8N5G0 67 aa8.01□□□□□ -1.13
SHKBP1-203ENST00000594298 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
SHKBP1-203ENST00000594298 NDUFC1O43677 76 aa7.99□□□□□ -1.13
SHKBP1-203ENST00000594298 A6NN06 94 aa7.96□□□□□ -1.14
SHKBP1-203ENST00000594298 MUC12Q9UKN1 5478 aa7.95□□□□□ -1.14
SHKBP1-203ENST00000594298 TRAV7A0A075B6U4 112 aa7.94□□□□□ -1.14
SHKBP1-203ENST00000594298 MT1BP07438 61 aa7.94□□□□□ -1.14
SHKBP1-203ENST00000594298 Q5VV11 94 aa7.9□□□□□ -1.14
SHKBP1-203ENST00000594298 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
SHKBP1-203ENST00000594298 SPRR2GQ9BYE4 73 aa7.89□□□□□ -1.15
SHKBP1-203ENST00000594298 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
SHKBP1-203ENST00000594298 H0YAA0 97 aa7.84□□□□□ -1.15
SHKBP1-203ENST00000594298 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
SHKBP1-203ENST00000594298 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
SHKBP1-203ENST00000594298 KRTAP20-1Q3LI63 56 aa7.8□□□□□ -1.16
SHKBP1-203ENST00000594298 KRTAP5-9P26371 169 aa7.79□□□□□ -1.16
SHKBP1-203ENST00000594298 ACYP2P14621 99 aa7.76□□□□□ -1.17
SHKBP1-203ENST00000594298 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
SHKBP1-203ENST00000594298 SERP2Q8N6R1 65 aa7.74□□□□□ -1.17
SHKBP1-203ENST00000594298 SNURFQ9Y675 71 aa7.72□□□□□ -1.17
SHKBP1-203ENST00000594298 KMT2DO14686 5537 aa7.7□□□□□ -1.18
SHKBP1-203ENST00000594298 C20orf197Q8N268 126 aa7.68□□□□□ -1.18
SHKBP1-203ENST00000594298 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
SHKBP1-203ENST00000594298 SPTSSBQ8NFR3 76 aa7.67□□□□□ -1.18
SHKBP1-203ENST00000594298 SPANXA2-OT1Q8N9U9 137 aa7.64□□□□□ -1.19
SHKBP1-203ENST00000594298 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
SHKBP1-203ENST00000594298 R4GN34 69 aa7.56□□□□□ -1.2
SHKBP1-203ENST00000594298 P0C880 135 aa7.55□□□□□ -1.2
SHKBP1-203ENST00000594298 COX7CP15954 63 aa7.55□□□□□ -1.2
SHKBP1-203ENST00000594298 KRTAP2-3P0C7H8 128 aa7.53□□□□□ -1.2
SHKBP1-203ENST00000594298 KRTAP2-4Q9BYR9 128 aa7.53□□□□□ -1.2
SHKBP1-203ENST00000594298 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
SHKBP1-203ENST00000594298 M0QZ58 72 aa7.49□□□□□ -1.21
SHKBP1-203ENST00000594298 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
SHKBP1-203ENST00000594298 SPRR2FQ96RM1 72 aa7.43□□□□□ -1.22
SHKBP1-203ENST00000594298 SPRR2EP22531 72 aa7.4□□□□□ -1.22
SHKBP1-203ENST00000594298 SPRR2BP35325 72 aa7.4□□□□□ -1.22
SHKBP1-203ENST00000594298 SPRR2AP35326 72 aa7.4□□□□□ -1.22
SHKBP1-203ENST00000594298 ANAPC13Q9BS18 74 aa7.4□□□□□ -1.22
SHKBP1-203ENST00000594298 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.22
SHKBP1-203ENST00000594298 COA5Q86WW8 74 aa7.39□□□□□ -1.23
SHKBP1-203ENST00000594298 H7BZZ5 65 aa7.36□□□□□ -1.23
SHKBP1-203ENST00000594298 MT1XP80297 61 aa7.36□□□□□ -1.23
SHKBP1-203ENST00000594298 LINC01554Q52M75 96 aa7.36□□□□□ -1.23
SHKBP1-203ENST00000594298 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
SHKBP1-203ENST00000594298 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
SHKBP1-203ENST00000594298 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
SHKBP1-203ENST00000594298 KRTAP2-2Q9BYT5 123 aa7.28□□□□□ -1.24
SHKBP1-203ENST00000594298 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
SHKBP1-203ENST00000594298 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
SHKBP1-203ENST00000594298 SEC61GP60059 68 aa7.27□□□□□ -1.25
SHKBP1-203ENST00000594298 SERP1Q9Y6X1 66 aa7.25□□□□□ -1.25
SHKBP1-203ENST00000594298 CCDC179H3BU77 68 aa7.19□□□□□ -1.26
SHKBP1-203ENST00000594298 SPRR2DP22532 72 aa7.16□□□□□ -1.26
SHKBP1-203ENST00000594298 ATP5EP56381 51 aaPredicted RBP7.14□□□□□ -1.27
SHKBP1-203ENST00000594298 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
SHKBP1-203ENST00000594298 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
SHKBP1-203ENST00000594298 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
SHKBP1-203ENST00000594298 A0A1B0GU33 70 aa7.07□□□□□ -1.28
SHKBP1-203ENST00000594298 A0A1B0GU69 56 aa7.05□□□□□ -1.28
SHKBP1-203ENST00000594298 KRTAP10-7P60409 375 aaPredicted RBP7.01□□□□□ -1.29
SHKBP1-203ENST00000594298 KRTAP10-12P60413 245 aa7□□□□□ -1.29
SHKBP1-203ENST00000594298 LCE3BQ5TA77 95 aa7□□□□□ -1.29
SHKBP1-203ENST00000594298 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
SHKBP1-203ENST00000594298 TMEM258P61165 79 aa6.99□□□□□ -1.29
SHKBP1-203ENST00000594298 A0A0D9SG42 100 aa6.98□□□□□ -1.29
SHKBP1-203ENST00000594298 SPATA8Q6RVD6 105 aa6.98□□□□□ -1.29
SHKBP1-203ENST00000594298 PRR15LQ9BU68 103 aa6.94□□□□□ -1.3
SHKBP1-203ENST00000594298 SMIM26A0A096LP01 95 aa6.91□□□□□ -1.3
SHKBP1-203ENST00000594298 SPINT4Q6UDR6 99 aa6.89□□□□□ -1.31
SHKBP1-203ENST00000594298 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
SHKBP1-203ENST00000594298 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
SHKBP1-203ENST00000594298 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
SHKBP1-203ENST00000594298 GPR98Q8WXG9 6306 aa6.78□□□□□ -1.32
SHKBP1-203ENST00000594298 A8MU10 97 aa6.75□□□□□ -1.33
SHKBP1-203ENST00000594298 UQCR11O14957 56 aa6.69□□□□□ -1.34
SHKBP1-203ENST00000594298 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
SHKBP1-203ENST00000594298 V9GYY9 64 aa6.64□□□□□ -1.35
SHKBP1-203ENST00000594298 KRTAP19-7Q3SYF9 63 aa6.59□□□□□ -1.35
SHKBP1-203ENST00000594298 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
SHKBP1-203ENST00000594298 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
SHKBP1-203ENST00000594298 MT1EP04732 61 aa6.55□□□□□ -1.36
SHKBP1-203ENST00000594298 Q1T7F1 81 aa6.54□□□□□ -1.36
SHKBP1-203ENST00000594298 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
SHKBP1-203ENST00000594298 TNP1P09430 55 aa6.51□□□□□ -1.37
SHKBP1-203ENST00000594298 PSPHP1O15172 72 aa6.49□□□□□ -1.37
SHKBP1-203ENST00000594298 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
SHKBP1-203ENST00000594298 PCP4P48539 62 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 221.8 ms