RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SPINK7P58062 85 aa6.51□□□□□ -1.37
H3F3B-213ENST00000593254 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
H3F3B-213ENST00000593254 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
H3F3B-213ENST00000593254 PRR15Q8IV56 129 aa6.47□□□□□ -1.37
H3F3B-213ENST00000593254 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
H3F3B-213ENST00000593254 TMEM258P61165 79 aa6.45□□□□□ -1.38
H3F3B-213ENST00000593254 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
H3F3B-213ENST00000593254 OCR1Q9BZK8 76 aa6.44□□□□□ -1.38
H3F3B-213ENST00000593254 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
H3F3B-213ENST00000593254 NDUFC1O43677 76 aa6.43□□□□□ -1.38
H3F3B-213ENST00000593254 Q8N9L7 120 aa6.43□□□□□ -1.38
H3F3B-213ENST00000593254 K7EQZ3 153 aa6.42□□□□□ -1.38
H3F3B-213ENST00000593254 WFDC13Q8IUB5 93 aa6.42□□□□□ -1.38
H3F3B-213ENST00000593254 TMEM254Q8TBM7 123 aa6.42□□□□□ -1.38
H3F3B-213ENST00000593254 HCG22E2RYF7 251 aa6.41□□□□□ -1.38
H3F3B-213ENST00000593254 MRPL34Q9BQ48 92 aaKnown RBP6.41□□□□□ -1.38
H3F3B-213ENST00000593254 NEBP20929 6669 aa6.4□□□□□ -1.39
H3F3B-213ENST00000593254 C20orf197Q8N268 126 aa6.39□□□□□ -1.39
H3F3B-213ENST00000593254 hDV103S1A0JD37 113 aa6.38□□□□□ -1.39
H3F3B-213ENST00000593254 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
H3F3B-213ENST00000593254 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
H3F3B-213ENST00000593254 H7BZZ5 65 aa6.34□□□□□ -1.39
H3F3B-213ENST00000593254 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
H3F3B-213ENST00000593254 C5orf47Q569G3 176 aa6.34□□□□□ -1.39
H3F3B-213ENST00000593254 NDUFS5O43920 106 aa6.33□□□□□ -1.4
H3F3B-213ENST00000593254 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
H3F3B-213ENST00000593254 H3BPC8 53 aa6.31□□□□□ -1.4
H3F3B-213ENST00000593254 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
H3F3B-213ENST00000593254 H1FX-AS1Q4G0G2 97 aa6.29□□□□□ -1.4
H3F3B-213ENST00000593254 Q5W150 140 aa6.29□□□□□ -1.4
H3F3B-213ENST00000593254 IGKV2D-30A0A075B6S6 120 aa6.27□□□□□ -1.41
H3F3B-213ENST00000593254 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
H3F3B-213ENST00000593254 C7orf65Q6ZTY9 151 aa6.27□□□□□ -1.41
H3F3B-213ENST00000593254 TP53AIP1Q9HCN2 124 aa6.27□□□□□ -1.41
H3F3B-213ENST00000593254 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
H3F3B-213ENST00000593254 MP68P56378 58 aa6.26□□□□□ -1.41
H3F3B-213ENST00000593254 SERP1Q9Y6X1 66 aa6.23□□□□□ -1.41
H3F3B-213ENST00000593254 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
H3F3B-213ENST00000593254 TRAV22A0A0B4J277 110 aa6.19□□□□□ -1.42
H3F3B-213ENST00000593254 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
H3F3B-213ENST00000593254 H0Y9P7 68 aa6.18□□□□□ -1.42
H3F3B-213ENST00000593254 C4orf26Q17RF5 130 aa6.18□□□□□ -1.42
H3F3B-213ENST00000593254 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
H3F3B-213ENST00000593254 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
H3F3B-213ENST00000593254 LINC00208Q96KT6 92 aa6.14□□□□□ -1.43
H3F3B-213ENST00000593254 C1orf64Q8NEQ6 169 aa6.12□□□□□ -1.43
H3F3B-213ENST00000593254 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
H3F3B-213ENST00000593254 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
H3F3B-213ENST00000593254 LOC101927531A0A1B0GV80 90 aa6.09□□□□□ -1.43
H3F3B-213ENST00000593254 S4R3F8 94 aa6.05□□□□□ -1.44
H3F3B-213ENST00000593254 KMT2DO14686 5537 aa6.05□□□□□ -1.44
H3F3B-213ENST00000593254 LCA10Q71F78 164 aa6.02□□□□□ -1.45
H3F3B-213ENST00000593254 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
H3F3B-213ENST00000593254 KRTAP5-9P26371 169 aa6□□□□□ -1.45
H3F3B-213ENST00000593254 A6NN06 94 aa5.96□□□□□ -1.46
H3F3B-213ENST00000593254 SPRR2GQ9BYE4 73 aa5.95□□□□□ -1.46
H3F3B-213ENST00000593254 V9GYY9 64 aa5.95□□□□□ -1.46
H3F3B-213ENST00000593254 MT1BP07438 61 aa5.94□□□□□ -1.46
H3F3B-213ENST00000593254 Q1T7F1 81 aa5.94□□□□□ -1.46
H3F3B-213ENST00000593254 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
H3F3B-213ENST00000593254 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
H3F3B-213ENST00000593254 Q5VV11 94 aa5.91□□□□□ -1.46
H3F3B-213ENST00000593254 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
H3F3B-213ENST00000593254 COA5Q86WW8 74 aa5.9□□□□□ -1.46
H3F3B-213ENST00000593254 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
H3F3B-213ENST00000593254 ACYP2P14621 99 aa5.86□□□□□ -1.47
H3F3B-213ENST00000593254 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
H3F3B-213ENST00000593254 A8MUN3 132 aa5.82□□□□□ -1.48
H3F3B-213ENST00000593254 CRIPTQ9P021 101 aa5.81□□□□□ -1.48
H3F3B-213ENST00000593254 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
H3F3B-213ENST00000593254 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
H3F3B-213ENST00000593254 H0YAA0 97 aa5.76□□□□□ -1.49
H3F3B-213ENST00000593254 CHKB-CPT1BH3BT56 60 aa5.73□□□□□ -1.49
H3F3B-213ENST00000593254 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
H3F3B-213ENST00000593254 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
H3F3B-213ENST00000593254 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
H3F3B-213ENST00000593254 PSPHP1O15172 72 aa5.69□□□□□ -1.5
H3F3B-213ENST00000593254 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
H3F3B-213ENST00000593254 SPRR2EP22531 72 aa5.68□□□□□ -1.5
H3F3B-213ENST00000593254 SPRR2BP35325 72 aa5.68□□□□□ -1.5
H3F3B-213ENST00000593254 SPRR2AP35326 72 aa5.68□□□□□ -1.5
H3F3B-213ENST00000593254 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
H3F3B-213ENST00000593254 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
H3F3B-213ENST00000593254 SPRR2FQ96RM1 72 aa5.66□□□□□ -1.5
H3F3B-213ENST00000593254 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
H3F3B-213ENST00000593254 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
H3F3B-213ENST00000593254 A0A1B0GU69 56 aa5.58□□□□□ -1.52
H3F3B-213ENST00000593254 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
H3F3B-213ENST00000593254 A6NED7 52 aa5.57□□□□□ -1.52
H3F3B-213ENST00000593254 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
H3F3B-213ENST00000593254 P0C880 135 aa5.55□□□□□ -1.52
H3F3B-213ENST00000593254 MT1XP80297 61 aa5.55□□□□□ -1.52
H3F3B-213ENST00000593254 PRO2289Q9P1D8 64 aa5.55□□□□□ -1.52
H3F3B-213ENST00000593254 GPR98Q8WXG9 6306 aa5.54□□□□□ -1.52
H3F3B-213ENST00000593254 R4GN34 69 aa5.54□□□□□ -1.52
H3F3B-213ENST00000593254 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
H3F3B-213ENST00000593254 SEC61GP60059 68 aa5.51□□□□□ -1.53
H3F3B-213ENST00000593254 SPRR2DP22532 72 aa5.5□□□□□ -1.53
H3F3B-213ENST00000593254 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
H3F3B-213ENST00000593254 M0QZ58 72 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms