RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 A0A1B0GU33 70 aa8.55□□□□□ -1.04
PRKCSH-217ENST00000592741 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
PRKCSH-217ENST00000592741 H0YAA0 97 aa8.52□□□□□ -1.05
PRKCSH-217ENST00000592741 MYCBP2O75592 4640 aa8.48□□□□□ -1.05
PRKCSH-217ENST00000592741 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
PRKCSH-217ENST00000592741 S4R3F8 94 aa8.45□□□□□ -1.06
PRKCSH-217ENST00000592741 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
PRKCSH-217ENST00000592741 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
PRKCSH-217ENST00000592741 EPPK1P58107 5090 aaKnown RBP8.4□□□□□ -1.06
PRKCSH-217ENST00000592741 PRAC1Q96KF2 57 aa8.39□□□□□ -1.07
PRKCSH-217ENST00000592741 ADM2Q7Z4H4 148 aa8.38□□□□□ -1.07
PRKCSH-217ENST00000592741 KRTAP10-6P60371 365 aaPredicted RBP8.33□□□□□ -1.08
PRKCSH-217ENST00000592741 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
PRKCSH-217ENST00000592741 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
PRKCSH-217ENST00000592741 K7ERS5 55 aa8.27□□□□□ -1.08
PRKCSH-217ENST00000592741 LRP2P98164 4655 aa8.24□□□□□ -1.09
PRKCSH-217ENST00000592741 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
PRKCSH-217ENST00000592741 LPAP08519 4548 aa8.2□□□□□ -1.1
PRKCSH-217ENST00000592741 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
PRKCSH-217ENST00000592741 P0C880 135 aa8.18□□□□□ -1.1
PRKCSH-217ENST00000592741 ABCA13Q86UQ4 5058 aa8.17□□□□□ -1.1
PRKCSH-217ENST00000592741 SEC61BP60468 96 aaKnown RBP8.15□□□□□ -1.11
PRKCSH-217ENST00000592741 A0A0D9SG42 100 aa8.14□□□□□ -1.11
PRKCSH-217ENST00000592741 J3QL48 77 aa8.13□□□□□ -1.11
PRKCSH-217ENST00000592741 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
PRKCSH-217ENST00000592741 ROMO1P60602 79 aa8.03□□□□□ -1.12
PRKCSH-217ENST00000592741 KRTAP25-1Q3LHN0 102 aa8.02□□□□□ -1.13
PRKCSH-217ENST00000592741 M0QZ58 72 aa7.99□□□□□ -1.13
PRKCSH-217ENST00000592741 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
PRKCSH-217ENST00000592741 HERC2O95714 4834 aa7.97□□□□□ -1.13
PRKCSH-217ENST00000592741 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
PRKCSH-217ENST00000592741 KRTAP12-2P59991 146 aa7.93□□□□□ -1.14
PRKCSH-217ENST00000592741 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
PRKCSH-217ENST00000592741 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.15
PRKCSH-217ENST00000592741 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
PRKCSH-217ENST00000592741 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
PRKCSH-217ENST00000592741 R4GN34 69 aa7.82□□□□□ -1.16
PRKCSH-217ENST00000592741 KRTAP19-2Q3LHN2 52 aa7.79□□□□□ -1.16
PRKCSH-217ENST00000592741 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
PRKCSH-217ENST00000592741 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
PRKCSH-217ENST00000592741 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
PRKCSH-217ENST00000592741 HERC1Q15751 4861 aa7.56□□□□□ -1.2
PRKCSH-217ENST00000592741 HMCN2Q8NDA2 5059 aa7.55□□□□□ -1.2
PRKCSH-217ENST00000592741 PCLOQ9Y6V0 5065 aa7.51□□□□□ -1.21
PRKCSH-217ENST00000592741 MUC2Q02817 5179 aa7.49□□□□□ -1.21
PRKCSH-217ENST00000592741 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
PRKCSH-217ENST00000592741 LCE2CQ5TA81 110 aa7.39□□□□□ -1.23
PRKCSH-217ENST00000592741 M0R2T5 61 aa7.25□□□□□ -1.25
PRKCSH-217ENST00000592741 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
PRKCSH-217ENST00000592741 MT1HP80294 61 aa7.23□□□□□ -1.25
PRKCSH-217ENST00000592741 RNF213Q63HN8 5207 aa7.21□□□□□ -1.26
PRKCSH-217ENST00000592741 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
PRKCSH-217ENST00000592741 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
PRKCSH-217ENST00000592741 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
PRKCSH-217ENST00000592741 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
PRKCSH-217ENST00000592741 PLAC4Q8WY50 150 aa7.12□□□□□ -1.27
PRKCSH-217ENST00000592741 TNP1P09430 55 aa7.12□□□□□ -1.27
PRKCSH-217ENST00000592741 UBR4Q5T4S7 5183 aa7.1□□□□□ -1.27
PRKCSH-217ENST00000592741 MT2AP02795 61 aa7.07□□□□□ -1.28
PRKCSH-217ENST00000592741 H3BS24 57 aa7.07□□□□□ -1.28
PRKCSH-217ENST00000592741 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
PRKCSH-217ENST00000592741 MT1FP04733 61 aa7.06□□□□□ -1.28
PRKCSH-217ENST00000592741 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
PRKCSH-217ENST00000592741 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
PRKCSH-217ENST00000592741 NDUFAF8A1L188 74 aa6.97□□□□□ -1.29
PRKCSH-217ENST00000592741 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
PRKCSH-217ENST00000592741 MT1BP07438 61 aa6.8□□□□□ -1.32
PRKCSH-217ENST00000592741 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
PRKCSH-217ENST00000592741 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
PRKCSH-217ENST00000592741 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
PRKCSH-217ENST00000592741 MT1XP80297 61 aa6.71□□□□□ -1.34
PRKCSH-217ENST00000592741 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
PRKCSH-217ENST00000592741 SPRR5A0A1B0GTR4 108 aa6.6□□□□□ -1.35
PRKCSH-217ENST00000592741 KRTAP8-1Q8IUC2 63 aa6.58□□□□□ -1.36
PRKCSH-217ENST00000592741 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
PRKCSH-217ENST00000592741 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
PRKCSH-217ENST00000592741 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
PRKCSH-217ENST00000592741 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
PRKCSH-217ENST00000592741 LCE2BO14633 110 aa6.48□□□□□ -1.37
PRKCSH-217ENST00000592741 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
PRKCSH-217ENST00000592741 A0A0A0MQY5 61 aa6.23□□□□□ -1.41
PRKCSH-217ENST00000592741 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
PRKCSH-217ENST00000592741 USH2AO75445 5202 aa6.18□□□□□ -1.42
PRKCSH-217ENST00000592741 KRTAP4-8A0A0G2JLE6 195 aa6.1□□□□□ -1.43
PRKCSH-217ENST00000592741 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
PRKCSH-217ENST00000592741 LCE3CQ5T5A8 94 aa6.04□□□□□ -1.44
PRKCSH-217ENST00000592741 KMT2DO14686 5537 aa6.01□□□□□ -1.45
PRKCSH-217ENST00000592741 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
PRKCSH-217ENST00000592741 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
PRKCSH-217ENST00000592741 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
PRKCSH-217ENST00000592741 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
PRKCSH-217ENST00000592741 MT1EP04732 61 aa5.83□□□□□ -1.48
PRKCSH-217ENST00000592741 MT1LQ93083 61 aa5.8□□□□□ -1.48
PRKCSH-217ENST00000592741 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
PRKCSH-217ENST00000592741 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
PRKCSH-217ENST00000592741 INE1O15225 51 aa5.7□□□□□ -1.5
PRKCSH-217ENST00000592741 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
PRKCSH-217ENST00000592741 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
PRKCSH-217ENST00000592741 KRTAP2-3P0C7H8 128 aa5.53□□□□□ -1.52
PRKCSH-217ENST00000592741 KRTAP2-4Q9BYR9 128 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 317.7 ms