RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	LINC00643	Q86TS7	51 aa		8.09	□□□□□ -1.11
CIRBP-238	ENST00000592412		J3QR89	54 aa		8.05	□□□□□ -1.12
CIRBP-238	ENST00000592412		S4R3F8	94 aa		8.03	□□□□□ -1.12
CIRBP-238	ENST00000592412	LCA10	Q71F78	164 aa		8.02	□□□□□ -1.13
CIRBP-238	ENST00000592412	KRTAP2-3	P0C7H8	128 aa		8	□□□□□ -1.13
CIRBP-238	ENST00000592412	CSAG1	Q6PB30	78 aa		8	□□□□□ -1.13
CIRBP-238	ENST00000592412	KRTAP2-4	Q9BYR9	128 aa		8	□□□□□ -1.13
CIRBP-238	ENST00000592412		A0A087WVE0	104 aa		7.99	□□□□□ -1.13
CIRBP-238	ENST00000592412	KLKP1	Q107X0	134 aa		7.99	□□□□□ -1.13
CIRBP-238	ENST00000592412	TRAV22	A0A0B4J277	110 aa		7.96	□□□□□ -1.14
CIRBP-238	ENST00000592412	UQCRQ	O14949	82 aa		7.93	□□□□□ -1.14
CIRBP-238	ENST00000592412	C1orf64	Q8NEQ6	169 aa		7.93	□□□□□ -1.14
CIRBP-238	ENST00000592412	KRTAP3-3	Q9BYR6	98 aa		7.91	□□□□□ -1.14
CIRBP-238	ENST00000592412	CYP4F30P	Q9H0H9	118 aa		7.91	□□□□□ -1.14
CIRBP-238	ENST00000592412	LOC101927531	A0A1B0GV80	90 aa		7.89	□□□□□ -1.15
CIRBP-238	ENST00000592412		H0Y9P7	68 aa		7.88	□□□□□ -1.15
CIRBP-238	ENST00000592412	IMUP	Q9GZP8	106 aa		7.88	□□□□□ -1.15
CIRBP-238	ENST00000592412	ATOX1	O00244	68 aa		7.87	□□□□□ -1.15
CIRBP-238	ENST00000592412	SPRR2F	Q96RM1	72 aa		7.86	□□□□□ -1.15
CIRBP-238	ENST00000592412		K7ERU9	68 aa		7.85	□□□□□ -1.15
CIRBP-238	ENST00000592412	SPRR2E	P22531	72 aa		7.84	□□□□□ -1.15
CIRBP-238	ENST00000592412	SPRR2B	P35325	72 aa		7.84	□□□□□ -1.15
CIRBP-238	ENST00000592412	SPRR2A	P35326	72 aa		7.84	□□□□□ -1.15
CIRBP-238	ENST00000592412	OCR1	Q9BZK8	76 aa		7.82	□□□□□ -1.16
CIRBP-238	ENST00000592412	CRIPT	Q9P021	101 aa		7.81	□□□□□ -1.16
CIRBP-238	ENST00000592412	MP68	P56378	58 aa		7.78	□□□□□ -1.16
CIRBP-238	ENST00000592412	LINC00208	Q96KT6	92 aa		7.78	□□□□□ -1.16
CIRBP-238	ENST00000592412	MT-ATP8	P03928	68 aa		7.77	□□□□□ -1.17
CIRBP-238	ENST00000592412	SCGB1A1	P11684	91 aa		7.77	□□□□□ -1.17
CIRBP-238	ENST00000592412	LCE1A	Q5T7P2	110 aa		7.73	□□□□□ -1.17
CIRBP-238	ENST00000592412	KRTAP2-2	Q9BYT5	123 aa		7.72	□□□□□ -1.17
CIRBP-238	ENST00000592412	KRTAP2-1	Q9BYU5	128 aa		7.72	□□□□□ -1.17
CIRBP-238	ENST00000592412	MT1X	P80297	61 aa		7.71	□□□□□ -1.18
CIRBP-238	ENST00000592412		H3BPC8	53 aa		7.67	□□□□□ -1.18
CIRBP-238	ENST00000592412	KRTAP8-1	Q8IUC2	63 aa		7.67	□□□□□ -1.18
CIRBP-238	ENST00000592412		A8MUN3	132 aa		7.62	□□□□□ -1.19
CIRBP-238	ENST00000592412	PRO2289	Q9P1D8	64 aa		7.62	□□□□□ -1.19
CIRBP-238	ENST00000592412		H0YAA0	97 aa		7.61	□□□□□ -1.19
CIRBP-238	ENST00000592412	SMIM20	Q8N5G0	67 aa		7.59	□□□□□ -1.19
CIRBP-238	ENST00000592412	TRAV7	A0A075B6U4	112 aa		7.58	□□□□□ -1.2
CIRBP-238	ENST00000592412	SPRR2D	P22532	72 aa		7.58	□□□□□ -1.2
CIRBP-238	ENST00000592412	KRTAP12-2	P59991	146 aa		7.58	□□□□□ -1.2
CIRBP-238	ENST00000592412	NDUFC1	O43677	76 aa		7.56	□□□□□ -1.2
CIRBP-238	ENST00000592412	KRTAP4-8	A0A0G2JLE6	195 aa		7.54	□□□□□ -1.2
CIRBP-238	ENST00000592412	KRTAP4-8	Q9BYQ9	185 aa		7.54	□□□□□ -1.2
CIRBP-238	ENST00000592412	ADM2	Q7Z4H4	148 aa		7.51	□□□□□ -1.21
CIRBP-238	ENST00000592412	DMAC1	Q96GE9	116 aa		7.48	□□□□□ -1.21
CIRBP-238	ENST00000592412	PLAC4	Q8WY50	150 aa		7.47	□□□□□ -1.21
CIRBP-238	ENST00000592412	LCE3B	Q5TA77	95 aa		7.43	□□□□□ -1.22
CIRBP-238	ENST00000592412	SERP2	Q8N6R1	65 aa		7.4	□□□□□ -1.22
CIRBP-238	ENST00000592412	SNURF	Q9Y675	71 aa		7.4	□□□□□ -1.22
CIRBP-238	ENST00000592412	KRTAP10-7	P60409	375 aa	Predicted RBP	7.36	□□□□□ -1.23
CIRBP-238	ENST00000592412	C20orf197	Q8N268	126 aa		7.36	□□□□□ -1.23
CIRBP-238	ENST00000592412	GPR98	Q8WXG9	6306 aa		7.36	□□□□□ -1.23
CIRBP-238	ENST00000592412	ACYP2	P14621	99 aa		7.35	□□□□□ -1.23
CIRBP-238	ENST00000592412		P0C880	135 aa		7.33	□□□□□ -1.24
CIRBP-238	ENST00000592412		R4GN34	69 aa		7.32	□□□□□ -1.24
CIRBP-238	ENST00000592412	KRTAP10-12	P60413	245 aa		7.3	□□□□□ -1.24
CIRBP-238	ENST00000592412		M0QZ58	72 aa		7.26	□□□□□ -1.25
CIRBP-238	ENST00000592412	SPANXA2-OT1	Q8N9U9	137 aa		7.26	□□□□□ -1.25
CIRBP-238	ENST00000592412	CHKB-CPT1B	H3BT56	60 aa		7.24	□□□□□ -1.25
CIRBP-238	ENST00000592412	SPTSSB	Q8NFR3	76 aa		7.24	□□□□□ -1.25
CIRBP-238	ENST00000592412	COX7C	P15954	63 aa		7.23	□□□□□ -1.25
CIRBP-238	ENST00000592412	DST	Q03001	7570 aa	Known RBP	7.23	□□□□□ -1.25
CIRBP-238	ENST00000592412	KRTAP3-2	Q9BYR7	98 aa		7.21	□□□□□ -1.26
CIRBP-238	ENST00000592412	LINC01554	Q52M75	96 aa		7.18	□□□□□ -1.26
CIRBP-238	ENST00000592412	CYSTM1	Q9H1C7	97 aa		7.15	□□□□□ -1.26
CIRBP-238	ENST00000592412	ANAPC13	Q9BS18	74 aa		7.13	□□□□□ -1.27
CIRBP-238	ENST00000592412		H7BZZ5	65 aa		7.08	□□□□□ -1.28
CIRBP-238	ENST00000592412	COA5	Q86WW8	74 aa		7.06	□□□□□ -1.28
CIRBP-238	ENST00000592412	KRTAP4-9	Q9BYQ8	210 aa		7.06	□□□□□ -1.28
CIRBP-238	ENST00000592412	CCDC179	H3BU77	68 aa		7.01	□□□□□ -1.29
CIRBP-238	ENST00000592412	LCE5A	Q5TCM9	118 aa		6.97	□□□□□ -1.29
CIRBP-238	ENST00000592412	KRTAP19-7	Q3SYF9	63 aa		6.91	□□□□□ -1.3
CIRBP-238	ENST00000592412	SEC61G	P60059	68 aa		6.87	□□□□□ -1.31
CIRBP-238	ENST00000592412	KRTAP19-3	Q7Z4W3	81 aa		6.87	□□□□□ -1.31
CIRBP-238	ENST00000592412	HMCN1	Q96RW7	5635 aa		6.86	□□□□□ -1.31
CIRBP-238	ENST00000592412	MT1E	P04732	61 aa		6.86	□□□□□ -1.31
CIRBP-238	ENST00000592412	SERP1	Q9Y6X1	66 aa		6.86	□□□□□ -1.31
CIRBP-238	ENST00000592412	LCE1D	Q5T752	114 aa		6.85	□□□□□ -1.31
CIRBP-238	ENST00000592412	KRTAP13-4	Q3LI77	160 aa		6.81	□□□□□ -1.32
CIRBP-238	ENST00000592412	ATP5E	P56381	51 aa	Predicted RBP	6.8	□□□□□ -1.32
CIRBP-238	ENST00000592412	AHNAK2	Q8IVF2	5795 aa		6.74	□□□□□ -1.33
CIRBP-238	ENST00000592412		A0A1B0GU33	70 aa		6.72	□□□□□ -1.33
CIRBP-238	ENST00000592412	TMEM258	P61165	79 aa		6.72	□□□□□ -1.33
CIRBP-238	ENST00000592412		A0A1B0GU69	56 aa		6.71	□□□□□ -1.34
CIRBP-238	ENST00000592412	MT4	P47944	62 aa		6.69	□□□□□ -1.34
CIRBP-238	ENST00000592412	SPATA8	Q6RVD6	105 aa		6.68	□□□□□ -1.34
CIRBP-238	ENST00000592412	LCE4A	Q5TA78	99 aa		6.67	□□□□□ -1.34
CIRBP-238	ENST00000592412		A0A0D9SG42	100 aa		6.66	□□□□□ -1.34
CIRBP-238	ENST00000592412	CAMK2N1	Q7Z7J9	78 aa		6.64	□□□□□ -1.35
CIRBP-238	ENST00000592412	MT1G	P13640	62 aa		6.63	□□□□□ -1.35
CIRBP-238	ENST00000592412	KRTAP5-10	Q6L8G5	202 aa		6.6	□□□□□ -1.35
CIRBP-238	ENST00000592412	KRTAP19-5	Q3LI72	72 aa		6.59	□□□□□ -1.35
CIRBP-238	ENST00000592412	PRR15L	Q9BU68	103 aa		6.58	□□□□□ -1.36
CIRBP-238	ENST00000592412	SPINT4	Q6UDR6	99 aa		6.56	□□□□□ -1.36
CIRBP-238	ENST00000592412	MT1M	Q8N339	61 aa		6.56	□□□□□ -1.36
CIRBP-238	ENST00000592412	SMIM26	A0A096LP01	95 aa		6.53	□□□□□ -1.36
CIRBP-238	ENST00000592412	KRTAP5-4	Q6L8H1	288 aa		6.53	□□□□□ -1.36
CIRBP-238	ENST00000592412	LINC01558	Q9Y6Z2	57 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms