RNA–Protein interactions for RNA: ENST00000592165.1

GPATCH1-203, Transcript of G-patch domain containing 1, humanhuman

TSL 5

Gene GPATCH1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-203ENST00000592165 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
GPATCH1-203ENST00000592165 XP32Q5T750 250 aa7.89□□□□□ -1.15
GPATCH1-203ENST00000592165 TNXBP22105 4242 aa7.85□□□□□ -1.15
GPATCH1-203ENST00000592165 HERC1Q15751 4861 aa7.84□□□□□ -1.15
GPATCH1-203ENST00000592165 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
GPATCH1-203ENST00000592165 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
GPATCH1-203ENST00000592165 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
GPATCH1-203ENST00000592165 MYCBP2O75592 4640 aa7.79□□□□□ -1.16
GPATCH1-203ENST00000592165 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
GPATCH1-203ENST00000592165 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
GPATCH1-203ENST00000592165 A0A1B0GU33 70 aa7.75□□□□□ -1.17
GPATCH1-203ENST00000592165 J3QL48 77 aa7.73□□□□□ -1.17
GPATCH1-203ENST00000592165 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.17
GPATCH1-203ENST00000592165 S4R3F8 94 aa7.67□□□□□ -1.18
GPATCH1-203ENST00000592165 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
GPATCH1-203ENST00000592165 KRTAP3-2Q9BYR7 98 aa7.66□□□□□ -1.18
GPATCH1-203ENST00000592165 H0YAA0 97 aa7.64□□□□□ -1.19
GPATCH1-203ENST00000592165 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
GPATCH1-203ENST00000592165 RBM12B-AS1Q9P1G2 102 aa7.6□□□□□ -1.19
GPATCH1-203ENST00000592165 K7ERS5 55 aa7.54□□□□□ -1.2
GPATCH1-203ENST00000592165 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.21
GPATCH1-203ENST00000592165 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
GPATCH1-203ENST00000592165 CSAG1Q6PB30 78 aa7.48□□□□□ -1.21
GPATCH1-203ENST00000592165 HMCN2Q8NDA2 5059 aa7.48□□□□□ -1.21
GPATCH1-203ENST00000592165 UBR4Q5T4S7 5183 aa7.43□□□□□ -1.22
GPATCH1-203ENST00000592165 PRAC1Q96KF2 57 aa7.42□□□□□ -1.22
GPATCH1-203ENST00000592165 ADM2Q7Z4H4 148 aa7.42□□□□□ -1.22
GPATCH1-203ENST00000592165 P0C880 135 aa7.37□□□□□ -1.23
GPATCH1-203ENST00000592165 KRTAP13-4Q3LI77 160 aa7.35□□□□□ -1.23
GPATCH1-203ENST00000592165 M0QZ58 72 aa7.31□□□□□ -1.24
GPATCH1-203ENST00000592165 LRP2P98164 4655 aa7.31□□□□□ -1.24
GPATCH1-203ENST00000592165 A0A0D9SG42 100 aa7.3□□□□□ -1.24
GPATCH1-203ENST00000592165 ROMO1P60602 79 aa7.25□□□□□ -1.25
GPATCH1-203ENST00000592165 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
GPATCH1-203ENST00000592165 RNF213Q63HN8 5207 aa7.21□□□□□ -1.26
GPATCH1-203ENST00000592165 LPAP08519 4548 aa7.21□□□□□ -1.26
GPATCH1-203ENST00000592165 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
GPATCH1-203ENST00000592165 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
GPATCH1-203ENST00000592165 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
GPATCH1-203ENST00000592165 KRTAP12-2P59991 146 aa7.12□□□□□ -1.27
GPATCH1-203ENST00000592165 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
GPATCH1-203ENST00000592165 R4GN34 69 aa7.11□□□□□ -1.27
GPATCH1-203ENST00000592165 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
GPATCH1-203ENST00000592165 MUC17Q685J3 4493 aa7.07□□□□□ -1.28
GPATCH1-203ENST00000592165 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
GPATCH1-203ENST00000592165 MUC2Q02817 5179 aa6.93□□□□□ -1.3
GPATCH1-203ENST00000592165 H3BS24 57 aa6.92□□□□□ -1.3
GPATCH1-203ENST00000592165 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
GPATCH1-203ENST00000592165 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
GPATCH1-203ENST00000592165 FLGP20930 4061 aaPredicted RBP6.79□□□□□ -1.32
GPATCH1-203ENST00000592165 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
GPATCH1-203ENST00000592165 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
GPATCH1-203ENST00000592165 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
GPATCH1-203ENST00000592165 M0R2T5 61 aa6.65□□□□□ -1.35
GPATCH1-203ENST00000592165 MT1HP80294 61 aa6.6□□□□□ -1.35
GPATCH1-203ENST00000592165 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
GPATCH1-203ENST00000592165 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
GPATCH1-203ENST00000592165 LCE2BO14633 110 aa6.56□□□□□ -1.36
GPATCH1-203ENST00000592165 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
GPATCH1-203ENST00000592165 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
GPATCH1-203ENST00000592165 TNP1P09430 55 aa6.49□□□□□ -1.37
GPATCH1-203ENST00000592165 KRTAP9-2Q9BYQ4 174 aa6.49□□□□□ -1.37
GPATCH1-203ENST00000592165 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
GPATCH1-203ENST00000592165 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
GPATCH1-203ENST00000592165 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
GPATCH1-203ENST00000592165 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
GPATCH1-203ENST00000592165 MT2AP02795 61 aa6.45□□□□□ -1.38
GPATCH1-203ENST00000592165 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
GPATCH1-203ENST00000592165 MT1FP04733 61 aa6.41□□□□□ -1.38
GPATCH1-203ENST00000592165 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
GPATCH1-203ENST00000592165 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
GPATCH1-203ENST00000592165 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
GPATCH1-203ENST00000592165 A0A0A0MQY5 61 aa6.23□□□□□ -1.41
GPATCH1-203ENST00000592165 NDUFAF8A1L188 74 aa6.18□□□□□ -1.42
GPATCH1-203ENST00000592165 MT1BP07438 61 aa6.18□□□□□ -1.42
GPATCH1-203ENST00000592165 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
GPATCH1-203ENST00000592165 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
GPATCH1-203ENST00000592165 CRCT1Q9UGL9 99 aa6.1□□□□□ -1.43
GPATCH1-203ENST00000592165 MT1XP80297 61 aa6.09□□□□□ -1.43
GPATCH1-203ENST00000592165 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
GPATCH1-203ENST00000592165 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
GPATCH1-203ENST00000592165 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
GPATCH1-203ENST00000592165 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
GPATCH1-203ENST00000592165 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
GPATCH1-203ENST00000592165 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
GPATCH1-203ENST00000592165 USH2AO75445 5202 aa5.92□□□□□ -1.46
GPATCH1-203ENST00000592165 SSPOA2VEC9 5147 aa5.9□□□□□ -1.47
GPATCH1-203ENST00000592165 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
GPATCH1-203ENST00000592165 KRTAP12-3P60328 96 aa5.84□□□□□ -1.47
GPATCH1-203ENST00000592165 FCGBPQ9Y6R7 5405 aaPredicted RBP5.74□□□□□ -1.49
GPATCH1-203ENST00000592165 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
GPATCH1-203ENST00000592165 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
GPATCH1-203ENST00000592165 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
GPATCH1-203ENST00000592165 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
GPATCH1-203ENST00000592165 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
GPATCH1-203ENST00000592165 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
GPATCH1-203ENST00000592165 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
GPATCH1-203ENST00000592165 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
GPATCH1-203ENST00000592165 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
GPATCH1-203ENST00000592165 LCE3CQ5T5A8 94 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms