RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 KRTAP13-2Q52LG2 175 aa7.57□□□□□ -1.2
GFAP-221ENST00000592065 IGKV2-30P06310 120 aa7.55□□□□□ -1.2
GFAP-221ENST00000592065 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
GFAP-221ENST00000592065 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
GFAP-221ENST00000592065 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
GFAP-221ENST00000592065 MUC2Q02817 5179 aa7.49□□□□□ -1.21
GFAP-221ENST00000592065 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
GFAP-221ENST00000592065 CSAG1Q6PB30 78 aa7.46□□□□□ -1.21
GFAP-221ENST00000592065 A0A1B0GU69 56 aa7.43□□□□□ -1.22
GFAP-221ENST00000592065 IGKV2D-30A0A075B6S6 120 aa7.4□□□□□ -1.23
GFAP-221ENST00000592065 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
GFAP-221ENST00000592065 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
GFAP-221ENST00000592065 SPINK1P00995 79 aa7.36□□□□□ -1.23
GFAP-221ENST00000592065 UQCR11O14957 56 aa7.34□□□□□ -1.23
GFAP-221ENST00000592065 ROMO1P60602 79 aa7.28□□□□□ -1.24
GFAP-221ENST00000592065 RPS29P62273 56 aaKnown RBP7.28□□□□□ -1.24
GFAP-221ENST00000592065 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
GFAP-221ENST00000592065 FAT4Q6V0I7 4981 aa7.19□□□□□ -1.26
GFAP-221ENST00000592065 A8MUU9 505 aa7.16□□□□□ -1.26
GFAP-221ENST00000592065 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
GFAP-221ENST00000592065 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
GFAP-221ENST00000592065 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
GFAP-221ENST00000592065 C9orf92A6NGG3 77 aa7.1□□□□□ -1.27
GFAP-221ENST00000592065 P0C880 135 aa7.1□□□□□ -1.27
GFAP-221ENST00000592065 H0YAA0 97 aa7.07□□□□□ -1.28
GFAP-221ENST00000592065 A0A0A0MQY5 61 aa7.07□□□□□ -1.28
GFAP-221ENST00000592065 MUC17Q685J3 4493 aa7.04□□□□□ -1.28
GFAP-221ENST00000592065 KRTAP4-1Q9BYQ7 146 aa7.02□□□□□ -1.29
GFAP-221ENST00000592065 XP32Q5T750 250 aa7.01□□□□□ -1.29
GFAP-221ENST00000592065 A0A1B0GU33 70 aa7.01□□□□□ -1.29
GFAP-221ENST00000592065 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
GFAP-221ENST00000592065 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.29
GFAP-221ENST00000592065 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
GFAP-221ENST00000592065 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
GFAP-221ENST00000592065 CRIPTQ9P021 101 aa6.83□□□□□ -1.32
GFAP-221ENST00000592065 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
GFAP-221ENST00000592065 K7ERS5 55 aa6.79□□□□□ -1.32
GFAP-221ENST00000592065 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
GFAP-221ENST00000592065 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
GFAP-221ENST00000592065 NDUFAF8A1L188 74 aa6.78□□□□□ -1.32
GFAP-221ENST00000592065 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
GFAP-221ENST00000592065 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
GFAP-221ENST00000592065 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
GFAP-221ENST00000592065 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
GFAP-221ENST00000592065 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
GFAP-221ENST00000592065 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
GFAP-221ENST00000592065 S4R3F8 94 aa6.7□□□□□ -1.34
GFAP-221ENST00000592065 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
GFAP-221ENST00000592065 MT1HP80294 61 aa6.65□□□□□ -1.34
GFAP-221ENST00000592065 FLGP20930 4061 aaPredicted RBP6.63□□□□□ -1.35
GFAP-221ENST00000592065 A0A0D9SG42 100 aa6.62□□□□□ -1.35
GFAP-221ENST00000592065 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
GFAP-221ENST00000592065 M0R2T5 61 aa6.55□□□□□ -1.36
GFAP-221ENST00000592065 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
GFAP-221ENST00000592065 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
GFAP-221ENST00000592065 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
GFAP-221ENST00000592065 KRTAP12-1P59990 96 aa6.46□□□□□ -1.37
GFAP-221ENST00000592065 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
GFAP-221ENST00000592065 M0QZ58 72 aa6.41□□□□□ -1.38
GFAP-221ENST00000592065 USH2AO75445 5202 aa6.37□□□□□ -1.39
GFAP-221ENST00000592065 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
GFAP-221ENST00000592065 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
GFAP-221ENST00000592065 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
GFAP-221ENST00000592065 MT2AP02795 61 aa6.23□□□□□ -1.41
GFAP-221ENST00000592065 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
GFAP-221ENST00000592065 MT1FP04733 61 aa6.22□□□□□ -1.41
GFAP-221ENST00000592065 R4GN34 69 aa6.2□□□□□ -1.42
GFAP-221ENST00000592065 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
GFAP-221ENST00000592065 KRTAP10-10P60014 251 aa6.15□□□□□ -1.42
GFAP-221ENST00000592065 LCE2BO14633 110 aa6.1□□□□□ -1.43
GFAP-221ENST00000592065 PLAC4Q8WY50 150 aa6.1□□□□□ -1.43
GFAP-221ENST00000592065 KRTAP9-3Q9BYQ3 159 aa6.08□□□□□ -1.44
GFAP-221ENST00000592065 FCGBPQ9Y6R7 5405 aaPredicted RBP5.98□□□□□ -1.45
GFAP-221ENST00000592065 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
GFAP-221ENST00000592065 PP632Q6XCG6 107 aa5.9□□□□□ -1.47
GFAP-221ENST00000592065 CAMK2N1Q7Z7J9 78 aa5.89□□□□□ -1.47
GFAP-221ENST00000592065 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
GFAP-221ENST00000592065 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
GFAP-221ENST00000592065 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
GFAP-221ENST00000592065 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
GFAP-221ENST00000592065 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
GFAP-221ENST00000592065 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
GFAP-221ENST00000592065 MT1BP07438 61 aa5.71□□□□□ -1.5
GFAP-221ENST00000592065 TNP1P09430 55 aa5.71□□□□□ -1.5
GFAP-221ENST00000592065 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
GFAP-221ENST00000592065 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
GFAP-221ENST00000592065 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
GFAP-221ENST00000592065 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
GFAP-221ENST00000592065 KMT2DO14686 5537 aa5.55□□□□□ -1.52
GFAP-221ENST00000592065 INE1O15225 51 aa5.48□□□□□ -1.53
GFAP-221ENST00000592065 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
GFAP-221ENST00000592065 MUC12Q9UKN1 5478 aa5.48□□□□□ -1.53
GFAP-221ENST00000592065 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
GFAP-221ENST00000592065 MT1XP80297 61 aa5.38□□□□□ -1.55
GFAP-221ENST00000592065 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
GFAP-221ENST00000592065 MDN1Q9NU22 5596 aa5.33□□□□□ -1.56
GFAP-221ENST00000592065 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
GFAP-221ENST00000592065 NEBP20929 6669 aa5.28□□□□□ -1.56
GFAP-221ENST00000592065 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
GFAP-221ENST00000592065 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms