RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
VMP1-211ENST00000591315 CYP4F30PQ9H0H9 118 aa5.47□□□□□ -1.53
VMP1-211ENST00000591315 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
VMP1-211ENST00000591315 SEC61GP60059 68 aa5.46□□□□□ -1.54
VMP1-211ENST00000591315 C1orf64Q8NEQ6 169 aa5.46□□□□□ -1.54
VMP1-211ENST00000591315 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
VMP1-211ENST00000591315 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
VMP1-211ENST00000591315 H0Y9P7 68 aa5.42□□□□□ -1.54
VMP1-211ENST00000591315 UQCRQO14949 82 aa5.42□□□□□ -1.54
VMP1-211ENST00000591315 C5orf47Q569G3 176 aa5.42□□□□□ -1.54
VMP1-211ENST00000591315 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
VMP1-211ENST00000591315 J3QR89 54 aa5.4□□□□□ -1.54
VMP1-211ENST00000591315 S4R3F8 94 aa5.4□□□□□ -1.54
VMP1-211ENST00000591315 LCA10Q71F78 164 aa5.39□□□□□ -1.55
VMP1-211ENST00000591315 OCR1Q9BZK8 76 aa5.39□□□□□ -1.55
VMP1-211ENST00000591315 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
VMP1-211ENST00000591315 LINC00208Q96KT6 92 aa5.35□□□□□ -1.55
VMP1-211ENST00000591315 ATOX1O00244 68 aa5.34□□□□□ -1.55
VMP1-211ENST00000591315 MT-ATP8P03928 68 aa5.33□□□□□ -1.56
VMP1-211ENST00000591315 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
VMP1-211ENST00000591315 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
VMP1-211ENST00000591315 CSAG1Q6PB30 78 aa5.32□□□□□ -1.56
VMP1-211ENST00000591315 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
VMP1-211ENST00000591315 MP68P56378 58 aa5.29□□□□□ -1.56
VMP1-211ENST00000591315 K7ERU9 68 aa5.27□□□□□ -1.57
VMP1-211ENST00000591315 SCGB1A1P11684 91 aa5.27□□□□□ -1.57
VMP1-211ENST00000591315 FAM236AA0A1B0GUQ0 79 aa5.26□□□□□ -1.57
VMP1-211ENST00000591315 FAM236BA0A1B0GV22 79 aa5.26□□□□□ -1.57
VMP1-211ENST00000591315 IMUPQ9GZP8 106 aa5.23□□□□□ -1.57
VMP1-211ENST00000591315 H3BPC8 53 aa5.2□□□□□ -1.58
VMP1-211ENST00000591315 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
VMP1-211ENST00000591315 A8MUN3 132 aa5.19□□□□□ -1.58
VMP1-211ENST00000591315 NDUFC1O43677 76 aa5.18□□□□□ -1.58
VMP1-211ENST00000591315 TRAV7A0A075B6U4 112 aa5.16□□□□□ -1.58
VMP1-211ENST00000591315 MT1BP07438 61 aa5.16□□□□□ -1.58
VMP1-211ENST00000591315 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
VMP1-211ENST00000591315 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
VMP1-211ENST00000591315 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
VMP1-211ENST00000591315 ADM2Q7Z4H4 148 aa5.11□□□□□ -1.59
VMP1-211ENST00000591315 SMIM20Q8N5G0 67 aa5.1□□□□□ -1.59
VMP1-211ENST00000591315 SNURFQ9Y675 71 aa5.1□□□□□ -1.59
VMP1-211ENST00000591315 H0YAA0 97 aa5.08□□□□□ -1.6
VMP1-211ENST00000591315 Q5VV11 94 aa5.08□□□□□ -1.6
VMP1-211ENST00000591315 P0C880 135 aa5.05□□□□□ -1.6
VMP1-211ENST00000591315 CRIPTQ9P021 101 aa5.05□□□□□ -1.6
VMP1-211ENST00000591315 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
VMP1-211ENST00000591315 C20orf197Q8N268 126 aa5.03□□□□□ -1.6
VMP1-211ENST00000591315 SERP2Q8N6R1 65 aa5.03□□□□□ -1.6
VMP1-211ENST00000591315 ACYP2P14621 99 aa5.01□□□□□ -1.61
VMP1-211ENST00000591315 A6NN06 94 aa4.99□□□□□ -1.61
VMP1-211ENST00000591315 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
VMP1-211ENST00000591315 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
VMP1-211ENST00000591315 V9GYY9 64 aa4.96□□□□□ -1.62
VMP1-211ENST00000591315 M0QZ58 72 aa4.93□□□□□ -1.62
VMP1-211ENST00000591315 SPANXA2-OT1Q8N9U9 137 aa4.93□□□□□ -1.62
VMP1-211ENST00000591315 CHKB-CPT1BH3BT56 60 aa4.92□□□□□ -1.62
VMP1-211ENST00000591315 CYSTM1Q9H1C7 97 aa4.92□□□□□ -1.62
VMP1-211ENST00000591315 R4GN34 69 aa4.92□□□□□ -1.62
VMP1-211ENST00000591315 COX7CP15954 63 aa4.9□□□□□ -1.63
VMP1-211ENST00000591315 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
VMP1-211ENST00000591315 SPTSSBQ8NFR3 76 aa4.88□□□□□ -1.63
VMP1-211ENST00000591315 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
VMP1-211ENST00000591315 MT1XP80297 61 aa4.86□□□□□ -1.63
VMP1-211ENST00000591315 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
VMP1-211ENST00000591315 COA5Q86WW8 74 aa4.84□□□□□ -1.63
VMP1-211ENST00000591315 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
VMP1-211ENST00000591315 H7BZZ5 65 aa4.83□□□□□ -1.64
VMP1-211ENST00000591315 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
VMP1-211ENST00000591315 ANAPC13Q9BS18 74 aa4.79□□□□□ -1.64
VMP1-211ENST00000591315 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.64
VMP1-211ENST00000591315 KMT2DO14686 5537 aa4.77□□□□□ -1.65
VMP1-211ENST00000591315 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
VMP1-211ENST00000591315 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
VMP1-211ENST00000591315 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
VMP1-211ENST00000591315 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
VMP1-211ENST00000591315 NEBP20929 6669 aa4.7□□□□□ -1.66
VMP1-211ENST00000591315 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
VMP1-211ENST00000591315 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
VMP1-211ENST00000591315 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
VMP1-211ENST00000591315 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
VMP1-211ENST00000591315 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
VMP1-211ENST00000591315 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
VMP1-211ENST00000591315 A0A0D9SG42 100 aa4.62□□□□□ -1.67
VMP1-211ENST00000591315 A0A1B0GU33 70 aa4.6□□□□□ -1.67
VMP1-211ENST00000591315 KRTAP8-1Q8IUC2 63 aa4.6□□□□□ -1.67
VMP1-211ENST00000591315 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
VMP1-211ENST00000591315 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
VMP1-211ENST00000591315 A0A1B0GU69 56 aa4.55□□□□□ -1.68
VMP1-211ENST00000591315 CAMK2N1Q7Z7J9 78 aa4.55□□□□□ -1.68
VMP1-211ENST00000591315 ATP5EP56381 51 aaPredicted RBP4.53□□□□□ -1.68
VMP1-211ENST00000591315 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
VMP1-211ENST00000591315 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
VMP1-211ENST00000591315 A8MU10 97 aa4.51□□□□□ -1.69
VMP1-211ENST00000591315 SPRR2EP22531 72 aa4.5□□□□□ -1.69
VMP1-211ENST00000591315 SPRR2BP35325 72 aa4.5□□□□□ -1.69
VMP1-211ENST00000591315 SPRR2AP35326 72 aa4.5□□□□□ -1.69
VMP1-211ENST00000591315 TMEM258P61165 79 aa4.49□□□□□ -1.69
VMP1-211ENST00000591315 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
VMP1-211ENST00000591315 PSPHP1O15172 72 aa4.46□□□□□ -1.7
VMP1-211ENST00000591315 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms