RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 PCLOQ9Y6V0 5065 aa13.34□□□□□ -0.27
RUNDC3A-206ENST00000590941 CDC42SE1Q9NRR8 79 aa13.28□□□□□ -0.28
RUNDC3A-206ENST00000590941 RBM12B-AS1Q9P1G2 102 aa13.27□□□□□ -0.29
RUNDC3A-206ENST00000590941 H1FX-AS1Q4G0G2 97 aa13.21□□□□□ -0.29
RUNDC3A-206ENST00000590941 S4R3F8 94 aa13.21□□□□□ -0.3
RUNDC3A-206ENST00000590941 UQCR11O14957 56 aa13.18□□□□□ -0.3
RUNDC3A-206ENST00000590941 LCA10Q71F78 164 aa13.18□□□□□ -0.3
RUNDC3A-206ENST00000590941 LRP2P98164 4655 aa13.11□□□□□ -0.31
RUNDC3A-206ENST00000590941 KRTAP3-3Q9BYR6 98 aa13.08□□□□□ -0.32
RUNDC3A-206ENST00000590941 SPATA8Q6RVD6 105 aa13.06□□□□□ -0.32
RUNDC3A-206ENST00000590941 LPAP08519 4548 aa13.04□□□□□ -0.32
RUNDC3A-206ENST00000590941 MIR22HGQ0VDD5 57 aa13.03□□□□□ -0.32
RUNDC3A-206ENST00000590941 A8MU10 97 aa13.02□□□□□ -0.33
RUNDC3A-206ENST00000590941 A0A1B0GU33 70 aa12.94□□□□□ -0.34
RUNDC3A-206ENST00000590941 CSAG1Q6PB30 78 aa12.89□□□□□ -0.35
RUNDC3A-206ENST00000590941 PMAIP1Q13794 54 aa12.85□□□□□ -0.35
RUNDC3A-206ENST00000590941 MUC17Q685J3 4493 aa12.82□□□□□ -0.36
RUNDC3A-206ENST00000590941 KRTAP4-1Q9BYQ7 146 aa12.8□□□□□ -0.36
RUNDC3A-206ENST00000590941 HERC1Q15751 4861 aa12.77□□□□□ -0.36
RUNDC3A-206ENST00000590941 KRTAP10-6P60371 365 aaPredicted RBP12.75□□□□□ -0.37
RUNDC3A-206ENST00000590941 H0YAA0 97 aa12.74□□□□□ -0.37
RUNDC3A-206ENST00000590941 KRTAP3-2Q9BYR7 98 aa12.72□□□□□ -0.37
RUNDC3A-206ENST00000590941 A6NN06 94 aa12.7□□□□□ -0.38
RUNDC3A-206ENST00000590941 ADM2Q7Z4H4 148 aa12.63□□□□□ -0.39
RUNDC3A-206ENST00000590941 KRTAP19-2Q3LHN2 52 aa12.58□□□□□ -0.4
RUNDC3A-206ENST00000590941 P0C880 135 aa12.55□□□□□ -0.4
RUNDC3A-206ENST00000590941 HMCN2Q8NDA2 5059 aa12.51□□□□□ -0.41
RUNDC3A-206ENST00000590941 K7ERS5 55 aa12.49□□□□□ -0.41
RUNDC3A-206ENST00000590941 KTN1-AS1Q86SY8 53 aa12.48□□□□□ -0.41
RUNDC3A-206ENST00000590941 M0QZ58 72 aa12.45□□□□□ -0.42
RUNDC3A-206ENST00000590941 KRTAP13-4Q3LI77 160 aa12.4□□□□□ -0.42
RUNDC3A-206ENST00000590941 A0A0D9SG42 100 aa12.26□□□□□ -0.45
RUNDC3A-206ENST00000590941 R4GN34 69 aa12.2□□□□□ -0.46
RUNDC3A-206ENST00000590941 LCE2CQ5TA81 110 aa12.12□□□□□ -0.47
RUNDC3A-206ENST00000590941 FLGP20930 4061 aaPredicted RBP12.12□□□□□ -0.47
RUNDC3A-206ENST00000590941 UBR4Q5T4S7 5183 aa12.07□□□□□ -0.48
RUNDC3A-206ENST00000590941 CRIPTQ9P021 101 aa12.03□□□□□ -0.48
RUNDC3A-206ENST00000590941 KRTAP12-1P59990 96 aa12.03□□□□□ -0.48
RUNDC3A-206ENST00000590941 KRTAP12-2P59991 146 aa11.98□□□□□ -0.49
RUNDC3A-206ENST00000590941 SPINT4Q6UDR6 99 aa11.98□□□□□ -0.49
RUNDC3A-206ENST00000590941 MUC2Q02817 5179 aa11.97□□□□□ -0.49
RUNDC3A-206ENST00000590941 ROMO1P60602 79 aa11.94□□□□□ -0.5
RUNDC3A-206ENST00000590941 LORP23490 312 aaPredicted RBP11.94□□□□□ -0.5
RUNDC3A-206ENST00000590941 LINC01554Q52M75 96 aa11.91□□□□□ -0.5
RUNDC3A-206ENST00000590941 MT1HP80294 61 aa11.89□□□□□ -0.51
RUNDC3A-206ENST00000590941 M0R2T5 61 aa11.87□□□□□ -0.51
RUNDC3A-206ENST00000590941 PRAC1Q96KF2 57 aa11.87□□□□□ -0.51
RUNDC3A-206ENST00000590941 RNF213Q63HN8 5207 aa11.82□□□□□ -0.52
RUNDC3A-206ENST00000590941 KRTAP25-1Q3LHN0 102 aa11.63□□□□□ -0.55
RUNDC3A-206ENST00000590941 SPRR2GQ9BYE4 73 aa11.56□□□□□ -0.56
RUNDC3A-206ENST00000590941 FAT4Q6V0I7 4981 aa11.54□□□□□ -0.56
RUNDC3A-206ENST00000590941 MT2AP02795 61 aa11.51□□□□□ -0.57
RUNDC3A-206ENST00000590941 KRTAP9-8Q9BYQ0 159 aa11.49□□□□□ -0.57
RUNDC3A-206ENST00000590941 CAMK2N1Q7Z7J9 78 aa11.49□□□□□ -0.57
RUNDC3A-206ENST00000590941 KRTAP10-10P60014 251 aa11.47□□□□□ -0.57
RUNDC3A-206ENST00000590941 MT1FP04733 61 aa11.43□□□□□ -0.58
RUNDC3A-206ENST00000590941 KRTAP19-1Q8IUB9 90 aa11.4□□□□□ -0.58
RUNDC3A-206ENST00000590941 PLAC4Q8WY50 150 aa11.33□□□□□ -0.6
RUNDC3A-206ENST00000590941 C10orf95Q9H7T3 257 aa11.33□□□□□ -0.6
RUNDC3A-206ENST00000590941 KRTAP19-8Q3LI54 63 aa11.2□□□□□ -0.62
RUNDC3A-206ENST00000590941 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
RUNDC3A-206ENST00000590941 KRTAP9-3Q9BYQ3 159 aa11.07□□□□□ -0.64
RUNDC3A-206ENST00000590941 TNP1P09430 55 aa11.03□□□□□ -0.64
RUNDC3A-206ENST00000590941 PP632Q6XCG6 107 aa11.01□□□□□ -0.65
RUNDC3A-206ENST00000590941 MT1BP07438 61 aa10.94□□□□□ -0.66
RUNDC3A-206ENST00000590941 KRTAP23-1A1A580 65 aa10.9□□□□□ -0.66
RUNDC3A-206ENST00000590941 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
RUNDC3A-206ENST00000590941 KRTAP9-6A0A140TA67 174 aa10.75□□□□□ -0.69
RUNDC3A-206ENST00000590941 MT1XP80297 61 aa10.68□□□□□ -0.7
RUNDC3A-206ENST00000590941 PRO2289Q9P1D8 64 aa10.68□□□□□ -0.7
RUNDC3A-206ENST00000590941 KRTAP10-5P60370 271 aa10.67□□□□□ -0.7
RUNDC3A-206ENST00000590941 LCE2BO14633 110 aa10.64□□□□□ -0.71
RUNDC3A-206ENST00000590941 LCE3AQ5TA76 89 aa10.38□□□□□ -0.75
RUNDC3A-206ENST00000590941 KRTAP15-1Q3LI76 137 aa10.35□□□□□ -0.75
RUNDC3A-206ENST00000590941 KRTAP10-12P60413 245 aa10.34□□□□□ -0.75
RUNDC3A-206ENST00000590941 LCE2DQ5TA82 110 aaPredicted RBP10.25□□□□□ -0.77
RUNDC3A-206ENST00000590941 KRTAP8-1Q8IUC2 63 aa10.25□□□□□ -0.77
RUNDC3A-206ENST00000590941 KRTAP10-7P60409 375 aaPredicted RBP10.23□□□□□ -0.77
RUNDC3A-206ENST00000590941 CRCT1Q9UGL9 99 aa10.1□□□□□ -0.79
RUNDC3A-206ENST00000590941 FSIP2Q5CZC0 6907 aa10.07□□□□□ -0.8
RUNDC3A-206ENST00000590941 USH2AO75445 5202 aa10.03□□□□□ -0.8
RUNDC3A-206ENST00000590941 KRTAP12-3P60328 96 aa9.99□□□□□ -0.81
RUNDC3A-206ENST00000590941 KRTAP19-6Q3LI70 58 aa9.99□□□□□ -0.81
RUNDC3A-206ENST00000590941 SPRR5A0A1B0GTR4 108 aa9.83□□□□□ -0.84
RUNDC3A-206ENST00000590941 LUZP6Q538Z0 58 aa9.8□□□□□ -0.84
RUNDC3A-206ENST00000590941 SSPOA2VEC9 5147 aa9.79□□□□□ -0.84
RUNDC3A-206ENST00000590941 KRTAP19-5Q3LI72 72 aa9.74□□□□□ -0.85
RUNDC3A-206ENST00000590941 NDUFAF8A1L188 74 aa9.72□□□□□ -0.85
RUNDC3A-206ENST00000590941 KRTAP4-8A0A0G2JLE6 195 aa9.67□□□□□ -0.86
RUNDC3A-206ENST00000590941 KRTAP4-8Q9BYQ9 185 aa9.67□□□□□ -0.86
RUNDC3A-206ENST00000590941 KRTAP9-7A8MTY7 169 aa9.58□□□□□ -0.88
RUNDC3A-206ENST00000590941 KRTAP19-4Q3LI73 84 aa9.52□□□□□ -0.89
RUNDC3A-206ENST00000590941 KRTAP19-7Q3SYF9 63 aa9.51□□□□□ -0.89
RUNDC3A-206ENST00000590941 H3BS24 57 aa9.46□□□□□ -0.89
RUNDC3A-206ENST00000590941 FCGBPQ9Y6R7 5405 aaPredicted RBP9.45□□□□□ -0.9
RUNDC3A-206ENST00000590941 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.45□□□□□ -0.9
RUNDC3A-206ENST00000590941 LCE3CQ5T5A8 94 aa9.36□□□□□ -0.91
RUNDC3A-206ENST00000590941 MT1EP04732 61 aa9.35□□□□□ -0.91
RUNDC3A-206ENST00000590941 KMT2DO14686 5537 aa9.3□□□□□ -0.92
RUNDC3A-206ENST00000590941 MT1LQ93083 61 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms