RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 RPL37P61927 97 aaKnown RBP11.81□□□□□ -0.52
RUNDC3A-205ENST00000590834 RBM12B-AS1Q9P1G2 102 aa11.78□□□□□ -0.52
RUNDC3A-205ENST00000590834 TPRXLQ17RH7 258 aa11.7□□□□□ -0.54
RUNDC3A-205ENST00000590834 LPAP08519 4548 aa11.65□□□□□ -0.54
RUNDC3A-205ENST00000590834 A0A1B0GU69 56 aa11.65□□□□□ -0.54
RUNDC3A-205ENST00000590834 LRP2P98164 4655 aa11.63□□□□□ -0.55
RUNDC3A-205ENST00000590834 J3QL48 77 aa11.62□□□□□ -0.55
RUNDC3A-205ENST00000590834 KRTAP3-1Q9BYR8 98 aa11.62□□□□□ -0.55
RUNDC3A-205ENST00000590834 SPATA8Q6RVD6 105 aa11.6□□□□□ -0.55
RUNDC3A-205ENST00000590834 PRAC1Q96KF2 57 aa11.54□□□□□ -0.56
RUNDC3A-205ENST00000590834 ADM2Q7Z4H4 148 aa11.54□□□□□ -0.56
RUNDC3A-205ENST00000590834 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
RUNDC3A-205ENST00000590834 UQCR11O14957 56 aa11.52□□□□□ -0.57
RUNDC3A-205ENST00000590834 MIR22HGQ0VDD5 57 aa11.47□□□□□ -0.57
RUNDC3A-205ENST00000590834 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
RUNDC3A-205ENST00000590834 SEC61BP60468 96 aaKnown RBP11.25□□□□□ -0.61
RUNDC3A-205ENST00000590834 HERC1Q15751 4861 aa11.23□□□□□ -0.61
RUNDC3A-205ENST00000590834 MUC17Q685J3 4493 aa11.2□□□□□ -0.62
RUNDC3A-205ENST00000590834 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
RUNDC3A-205ENST00000590834 LINC01554Q52M75 96 aa11.15□□□□□ -0.62
RUNDC3A-205ENST00000590834 H1FX-AS1Q4G0G2 97 aa11.14□□□□□ -0.63
RUNDC3A-205ENST00000590834 S4R3F8 94 aa11.14□□□□□ -0.63
RUNDC3A-205ENST00000590834 HMCN2Q8NDA2 5059 aa11.13□□□□□ -0.63
RUNDC3A-205ENST00000590834 KRTAP4-1Q9BYQ7 146 aa11.13□□□□□ -0.63
RUNDC3A-205ENST00000590834 CSAG1Q6PB30 78 aa11.1□□□□□ -0.63
RUNDC3A-205ENST00000590834 H0YAA0 97 aa11.04□□□□□ -0.64
RUNDC3A-205ENST00000590834 A0A1B0GU33 70 aa10.97□□□□□ -0.65
RUNDC3A-205ENST00000590834 MUC2Q02817 5179 aa10.91□□□□□ -0.66
RUNDC3A-205ENST00000590834 KRTAP19-2Q3LHN2 52 aa10.87□□□□□ -0.67
RUNDC3A-205ENST00000590834 KRTAP10-6P60371 365 aaPredicted RBP10.86□□□□□ -0.67
RUNDC3A-205ENST00000590834 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
RUNDC3A-205ENST00000590834 KRTAP25-1Q3LHN0 102 aa10.75□□□□□ -0.69
RUNDC3A-205ENST00000590834 K7ERS5 55 aa10.75□□□□□ -0.69
RUNDC3A-205ENST00000590834 P0C880 135 aa10.73□□□□□ -0.69
RUNDC3A-205ENST00000590834 CRIPTQ9P021 101 aa10.7□□□□□ -0.7
RUNDC3A-205ENST00000590834 H3BS24 57 aa10.66□□□□□ -0.7
RUNDC3A-205ENST00000590834 KRTAP13-4Q3LI77 160 aa10.63□□□□□ -0.71
RUNDC3A-205ENST00000590834 FLGP20930 4061 aaPredicted RBP10.63□□□□□ -0.71
RUNDC3A-205ENST00000590834 UBR4Q5T4S7 5183 aa10.61□□□□□ -0.71
RUNDC3A-205ENST00000590834 RNF213Q63HN8 5207 aa10.57□□□□□ -0.72
RUNDC3A-205ENST00000590834 ROMO1P60602 79 aa10.5□□□□□ -0.73
RUNDC3A-205ENST00000590834 LCE2CQ5TA81 110 aa10.49□□□□□ -0.73
RUNDC3A-205ENST00000590834 A0A0D9SG42 100 aa10.45□□□□□ -0.74
RUNDC3A-205ENST00000590834 FAT4Q6V0I7 4981 aa10.44□□□□□ -0.74
RUNDC3A-205ENST00000590834 M0QZ58 72 aa10.39□□□□□ -0.75
RUNDC3A-205ENST00000590834 LORP23490 312 aaPredicted RBP10.34□□□□□ -0.75
RUNDC3A-205ENST00000590834 R4GN34 69 aa10.28□□□□□ -0.76
RUNDC3A-205ENST00000590834 MT1HP80294 61 aa10.24□□□□□ -0.77
RUNDC3A-205ENST00000590834 C10orf95Q9H7T3 257 aa10.23□□□□□ -0.77
RUNDC3A-205ENST00000590834 KRTAP12-2P59991 146 aa10.21□□□□□ -0.77
RUNDC3A-205ENST00000590834 KRTAP12-1P59990 96 aa10.2□□□□□ -0.78
RUNDC3A-205ENST00000590834 SPINT4Q6UDR6 99 aa10.14□□□□□ -0.79
RUNDC3A-205ENST00000590834 M0R2T5 61 aa10.13□□□□□ -0.79
RUNDC3A-205ENST00000590834 KRTAP9-8Q9BYQ0 159 aa9.92□□□□□ -0.82
RUNDC3A-205ENST00000590834 MT2AP02795 61 aa9.9□□□□□ -0.82
RUNDC3A-205ENST00000590834 MT1FP04733 61 aa9.87□□□□□ -0.83
RUNDC3A-205ENST00000590834 KRTAP15-1Q3LI76 137 aa9.85□□□□□ -0.83
RUNDC3A-205ENST00000590834 SPRR2GQ9BYE4 73 aa9.82□□□□□ -0.84
RUNDC3A-205ENST00000590834 KRTAP10-10P60014 251 aa9.81□□□□□ -0.84
RUNDC3A-205ENST00000590834 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
RUNDC3A-205ENST00000590834 NDUFAF8A1L188 74 aa9.74□□□□□ -0.85
RUNDC3A-205ENST00000590834 CAMK2N1Q7Z7J9 78 aa9.66□□□□□ -0.86
RUNDC3A-205ENST00000590834 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
RUNDC3A-205ENST00000590834 KRTAP9-3Q9BYQ3 159 aa9.53□□□□□ -0.88
RUNDC3A-205ENST00000590834 PLAC4Q8WY50 150 aa9.52□□□□□ -0.89
RUNDC3A-205ENST00000590834 KRTAP19-8Q3LI54 63 aa9.51□□□□□ -0.89
RUNDC3A-205ENST00000590834 MT1BP07438 61 aa9.41□□□□□ -0.9
RUNDC3A-205ENST00000590834 PP632Q6XCG6 107 aa9.32□□□□□ -0.92
RUNDC3A-205ENST00000590834 LCE2BO14633 110 aa9.24□□□□□ -0.93
RUNDC3A-205ENST00000590834 TNP1P09430 55 aa9.23□□□□□ -0.93
RUNDC3A-205ENST00000590834 MT1XP80297 61 aa9.17□□□□□ -0.94
RUNDC3A-205ENST00000590834 KRTAP10-5P60370 271 aa9.16□□□□□ -0.94
RUNDC3A-205ENST00000590834 USH2AO75445 5202 aa9.05□□□□□ -0.96
RUNDC3A-205ENST00000590834 A0A0A0MQY5 61 aa9.04□□□□□ -0.96
RUNDC3A-205ENST00000590834 KRTAP23-1A1A580 65 aa9.01□□□□□ -0.97
RUNDC3A-205ENST00000590834 LUZP6Q538Z0 58 aa8.99□□□□□ -0.97
RUNDC3A-205ENST00000590834 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
RUNDC3A-205ENST00000590834 LCE3AQ5TA76 89 aa8.85□□□□□ -0.99
RUNDC3A-205ENST00000590834 KRTAP10-7P60409 375 aaPredicted RBP8.84□□□□□ -0.99
RUNDC3A-205ENST00000590834 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
RUNDC3A-205ENST00000590834 SPRR5A0A1B0GTR4 108 aa8.72□□□□□ -1.01
RUNDC3A-205ENST00000590834 SSPOA2VEC9 5147 aa8.69□□□□□ -1.02
RUNDC3A-205ENST00000590834 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
RUNDC3A-205ENST00000590834 LCE2DQ5TA82 110 aaPredicted RBP8.57□□□□□ -1.04
RUNDC3A-205ENST00000590834 FSIP2Q5CZC0 6907 aa8.56□□□□□ -1.04
RUNDC3A-205ENST00000590834 KRTAP19-6Q3LI70 58 aa8.55□□□□□ -1.04
RUNDC3A-205ENST00000590834 KMT2DO14686 5537 aa8.52□□□□□ -1.04
RUNDC3A-205ENST00000590834 KRTAP12-3P60328 96 aa8.46□□□□□ -1.06
RUNDC3A-205ENST00000590834 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
RUNDC3A-205ENST00000590834 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
RUNDC3A-205ENST00000590834 KRTAP19-5Q3LI72 72 aa8.35□□□□□ -1.07
RUNDC3A-205ENST00000590834 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
RUNDC3A-205ENST00000590834 KRTAP19-7Q3SYF9 63 aa8.19□□□□□ -1.1
RUNDC3A-205ENST00000590834 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
RUNDC3A-205ENST00000590834 MT1EP04732 61 aa8□□□□□ -1.13
RUNDC3A-205ENST00000590834 LCE3CQ5T5A8 94 aa7.93□□□□□ -1.14
RUNDC3A-205ENST00000590834 INE1O15225 51 aa7.92□□□□□ -1.14
RUNDC3A-205ENST00000590834 MT1LQ93083 61 aa7.89□□□□□ -1.15
RUNDC3A-205ENST00000590834 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
RUNDC3A-205ENST00000590834 MACF1Q9UPN3 7388 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms