RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
TREM1-206ENST00000589882 HERC2O95714 4834 aa6.13□□□□□ -1.43
TREM1-206ENST00000589882 DNAH6Q9C0G6 4158 aa6.13□□□□□ -1.43
TREM1-206ENST00000589882 XP32Q5T750 250 aa6.11□□□□□ -1.43
TREM1-206ENST00000589882 VPS13DQ5THJ4 4388 aa6.1□□□□□ -1.43
TREM1-206ENST00000589882 LCE2AQ5TA79 106 aaPredicted RBP6.07□□□□□ -1.44
TREM1-206ENST00000589882 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
TREM1-206ENST00000589882 FAT2Q9NYQ8 4349 aa6.04□□□□□ -1.44
TREM1-206ENST00000589882 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
TREM1-206ENST00000589882 DNAH17Q9UFH2 4485 aa6.03□□□□□ -1.44
TREM1-206ENST00000589882 DNAH2Q9P225 4427 aa6.03□□□□□ -1.44
TREM1-206ENST00000589882 SEC61BP60468 96 aaKnown RBP6.03□□□□□ -1.44
TREM1-206ENST00000589882 PKHD1P08F94 4074 aa6.03□□□□□ -1.44
TREM1-206ENST00000589882 C9orf92A6NGG3 77 aa6.02□□□□□ -1.44
TREM1-206ENST00000589882 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
TREM1-206ENST00000589882 RYR1P21817 5038 aa6.01□□□□□ -1.45
TREM1-206ENST00000589882 KIAA1109Q2LD37 5005 aa6.01□□□□□ -1.45
TREM1-206ENST00000589882 KRTAP12-1P59990 96 aa6□□□□□ -1.45
TREM1-206ENST00000589882 DNAH11Q96DT5 4516 aa5.99□□□□□ -1.45
TREM1-206ENST00000589882 DYNC1H1Q14204 4646 aaKnown RBP5.99□□□□□ -1.45
TREM1-206ENST00000589882 PLAC4Q8WY50 150 aa5.98□□□□□ -1.45
TREM1-206ENST00000589882 J3QL48 77 aa5.97□□□□□ -1.45
TREM1-206ENST00000589882 PKD1P98161 4303 aa5.95□□□□□ -1.46
TREM1-206ENST00000589882 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
TREM1-206ENST00000589882 KRTAP10-2P60368 255 aa5.91□□□□□ -1.46
TREM1-206ENST00000589882 M0QZ58 72 aa5.9□□□□□ -1.46
TREM1-206ENST00000589882 HSPG2P98160 4391 aa5.88□□□□□ -1.47
TREM1-206ENST00000589882 KRTAP10-1P60331 282 aa5.88□□□□□ -1.47
TREM1-206ENST00000589882 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
TREM1-206ENST00000589882 LRP1BQ9NZR2 4599 aa5.86□□□□□ -1.47
TREM1-206ENST00000589882 A0A1B0GVY2 172 aa5.85□□□□□ -1.47
TREM1-206ENST00000589882 APOBP04114 4563 aaKnown RBP5.82□□□□□ -1.48
TREM1-206ENST00000589882 DNAH5Q8TE73 4624 aa5.8□□□□□ -1.48
TREM1-206ENST00000589882 DMBT1Q9UGM3 2413 aaPredicted RBP5.8□□□□□ -1.48
TREM1-206ENST00000589882 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
TREM1-206ENST00000589882 LORP23490 312 aaPredicted RBP5.74□□□□□ -1.49
TREM1-206ENST00000589882 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
TREM1-206ENST00000589882 KRTAP4-5Q9BYR2 181 aa5.73□□□□□ -1.49
TREM1-206ENST00000589882 HERC1Q15751 4861 aa5.72□□□□□ -1.49
TREM1-206ENST00000589882 FAT1Q14517 4588 aa5.68□□□□□ -1.5
TREM1-206ENST00000589882 VPS13BQ7Z7G8 4022 aa5.67□□□□□ -1.5
TREM1-206ENST00000589882 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
TREM1-206ENST00000589882 MYCBP2O75592 4640 aa5.64□□□□□ -1.51
TREM1-206ENST00000589882 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
TREM1-206ENST00000589882 R4GN34 69 aa5.56□□□□□ -1.52
TREM1-206ENST00000589882 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
TREM1-206ENST00000589882 Q5VSD8 79 aa5.49□□□□□ -1.53
TREM1-206ENST00000589882 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
TREM1-206ENST00000589882 SMR3BP02814 79 aaPredicted RBP5.46□□□□□ -1.54
TREM1-206ENST00000589882 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
TREM1-206ENST00000589882 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
TREM1-206ENST00000589882 KRTAP10-4P60372 401 aaPredicted RBP5.45□□□□□ -1.54
TREM1-206ENST00000589882 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
TREM1-206ENST00000589882 INE1O15225 51 aa5.42□□□□□ -1.54
TREM1-206ENST00000589882 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
TREM1-206ENST00000589882 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
TREM1-206ENST00000589882 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
TREM1-206ENST00000589882 TNXBP22105 4242 aa5.31□□□□□ -1.56
TREM1-206ENST00000589882 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
TREM1-206ENST00000589882 TNP1P09430 55 aa5.27□□□□□ -1.57
TREM1-206ENST00000589882 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
TREM1-206ENST00000589882 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
TREM1-206ENST00000589882 LRP2P98164 4655 aa5.24□□□□□ -1.57
TREM1-206ENST00000589882 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
TREM1-206ENST00000589882 MT1HL1P0DM35 61 aa5.19□□□□□ -1.58
TREM1-206ENST00000589882 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
TREM1-206ENST00000589882 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
TREM1-206ENST00000589882 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
TREM1-206ENST00000589882 LPAP08519 4548 aa5.06□□□□□ -1.6
TREM1-206ENST00000589882 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
TREM1-206ENST00000589882 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
TREM1-206ENST00000589882 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
TREM1-206ENST00000589882 MUC2Q02817 5179 aa4.97□□□□□ -1.61
TREM1-206ENST00000589882 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
TREM1-206ENST00000589882 KRTAP5-3Q6L8H2 238 aa4.94□□□□□ -1.62
TREM1-206ENST00000589882 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
TREM1-206ENST00000589882 FAT4Q6V0I7 4981 aa4.87□□□□□ -1.63
TREM1-206ENST00000589882 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
TREM1-206ENST00000589882 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
TREM1-206ENST00000589882 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
TREM1-206ENST00000589882 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
TREM1-206ENST00000589882 KRTAP8-1Q8IUC2 63 aa4.76□□□□□ -1.65
TREM1-206ENST00000589882 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
TREM1-206ENST00000589882 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
TREM1-206ENST00000589882 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
TREM1-206ENST00000589882 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
TREM1-206ENST00000589882 KRTAP10-10P60014 251 aa4.65□□□□□ -1.66
TREM1-206ENST00000589882 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
TREM1-206ENST00000589882 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
TREM1-206ENST00000589882 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
TREM1-206ENST00000589882 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
TREM1-206ENST00000589882 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
TREM1-206ENST00000589882 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
TREM1-206ENST00000589882 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
TREM1-206ENST00000589882 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
TREM1-206ENST00000589882 MT1HP80294 61 aa4.43□□□□□ -1.7
TREM1-206ENST00000589882 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
TREM1-206ENST00000589882 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
TREM1-206ENST00000589882 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
TREM1-206ENST00000589882 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms