RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 A0A1B0GU33 70 aa9.87□□□□□ -0.83
PRKCSH-209ENST00000589838 KIAA1109Q2LD37 5005 aa9.85□□□□□ -0.83
PRKCSH-209ENST00000589838 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
PRKCSH-209ENST00000589838 TPRXLQ17RH7 258 aa9.83□□□□□ -0.84
PRKCSH-209ENST00000589838 H0YAA0 97 aa9.78□□□□□ -0.84
PRKCSH-209ENST00000589838 S4R3F8 94 aa9.78□□□□□ -0.84
PRKCSH-209ENST00000589838 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
PRKCSH-209ENST00000589838 MYCBP2O75592 4640 aa9.69□□□□□ -0.86
PRKCSH-209ENST00000589838 BIRC6Q9NR09 4857 aa9.67□□□□□ -0.86
PRKCSH-209ENST00000589838 RBM12B-AS1Q9P1G2 102 aa9.65□□□□□ -0.86
PRKCSH-209ENST00000589838 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
PRKCSH-209ENST00000589838 KRTAP10-6P60371 365 aaPredicted RBP9.6□□□□□ -0.87
PRKCSH-209ENST00000589838 K7ERS5 55 aa9.59□□□□□ -0.87
PRKCSH-209ENST00000589838 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
PRKCSH-209ENST00000589838 PRAC1Q96KF2 57 aa9.54□□□□□ -0.88
PRKCSH-209ENST00000589838 ADM2Q7Z4H4 148 aa9.53□□□□□ -0.88
PRKCSH-209ENST00000589838 SEC61BP60468 96 aaKnown RBP9.51□□□□□ -0.89
PRKCSH-209ENST00000589838 J3QL48 77 aa9.5□□□□□ -0.89
PRKCSH-209ENST00000589838 CSAG1Q6PB30 78 aa9.5□□□□□ -0.89
PRKCSH-209ENST00000589838 HERC2O95714 4834 aa9.46□□□□□ -0.9
PRKCSH-209ENST00000589838 LRP2P98164 4655 aa9.45□□□□□ -0.9
PRKCSH-209ENST00000589838 P0C880 135 aa9.42□□□□□ -0.9
PRKCSH-209ENST00000589838 KRTAP13-4Q3LI77 160 aa9.4□□□□□ -0.9
PRKCSH-209ENST00000589838 A0A0D9SG42 100 aa9.34□□□□□ -0.91
PRKCSH-209ENST00000589838 LPAP08519 4548 aa9.34□□□□□ -0.91
PRKCSH-209ENST00000589838 ABCA13Q86UQ4 5058 aa9.34□□□□□ -0.91
PRKCSH-209ENST00000589838 M0QZ58 72 aa9.28□□□□□ -0.92
PRKCSH-209ENST00000589838 ROMO1P60602 79 aa9.25□□□□□ -0.93
PRKCSH-209ENST00000589838 LINC01554Q52M75 96 aa9.25□□□□□ -0.93
PRKCSH-209ENST00000589838 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
PRKCSH-209ENST00000589838 KRTAP4-1Q9BYQ7 146 aa9.18□□□□□ -0.94
PRKCSH-209ENST00000589838 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
PRKCSH-209ENST00000589838 PCLOQ9Y6V0 5065 aa9.15□□□□□ -0.95
PRKCSH-209ENST00000589838 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
PRKCSH-209ENST00000589838 KRTAP12-2P59991 146 aa9.11□□□□□ -0.95
PRKCSH-209ENST00000589838 SPINT4Q6UDR6 99 aa9.1□□□□□ -0.95
PRKCSH-209ENST00000589838 R4GN34 69 aa9.05□□□□□ -0.96
PRKCSH-209ENST00000589838 KRTAP19-2Q3LHN2 52 aa9.03□□□□□ -0.96
PRKCSH-209ENST00000589838 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
PRKCSH-209ENST00000589838 HERC1Q15751 4861 aa8.86□□□□□ -0.99
PRKCSH-209ENST00000589838 LORP23490 312 aaPredicted RBP8.85□□□□□ -0.99
PRKCSH-209ENST00000589838 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
PRKCSH-209ENST00000589838 FLGP20930 4061 aaPredicted RBP8.73□□□□□ -1.01
PRKCSH-209ENST00000589838 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
PRKCSH-209ENST00000589838 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
PRKCSH-209ENST00000589838 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
PRKCSH-209ENST00000589838 MUC2Q02817 5179 aa8.54□□□□□ -1.04
PRKCSH-209ENST00000589838 M0R2T5 61 aa8.44□□□□□ -1.06
PRKCSH-209ENST00000589838 MT1HP80294 61 aa8.39□□□□□ -1.07
PRKCSH-209ENST00000589838 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
PRKCSH-209ENST00000589838 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
PRKCSH-209ENST00000589838 UBR4Q5T4S7 5183 aa8.33□□□□□ -1.08
PRKCSH-209ENST00000589838 KRTAP15-1Q3LI76 137 aa8.29□□□□□ -1.08
PRKCSH-209ENST00000589838 PLAC4Q8WY50 150 aa8.29□□□□□ -1.08
PRKCSH-209ENST00000589838 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
PRKCSH-209ENST00000589838 KRTAP19-1Q8IUB9 90 aa8.26□□□□□ -1.09
PRKCSH-209ENST00000589838 TNP1P09430 55 aa8.25□□□□□ -1.09
PRKCSH-209ENST00000589838 KRTAP10-10P60014 251 aa8.21□□□□□ -1.09
PRKCSH-209ENST00000589838 MT2AP02795 61 aa8.21□□□□□ -1.1
PRKCSH-209ENST00000589838 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
PRKCSH-209ENST00000589838 FAT4Q6V0I7 4981 aa8.18□□□□□ -1.1
PRKCSH-209ENST00000589838 MT1FP04733 61 aa8.17□□□□□ -1.1
PRKCSH-209ENST00000589838 KRTAP9-8Q9BYQ0 159 aa8.16□□□□□ -1.1
PRKCSH-209ENST00000589838 KRTAP19-8Q3LI54 63 aa8.04□□□□□ -1.12
PRKCSH-209ENST00000589838 H3BS24 57 aa7.99□□□□□ -1.13
PRKCSH-209ENST00000589838 NDUFAF8A1L188 74 aa7.94□□□□□ -1.14
PRKCSH-209ENST00000589838 MT1BP07438 61 aa7.87□□□□□ -1.15
PRKCSH-209ENST00000589838 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
PRKCSH-209ENST00000589838 KRTAP10-5P60370 271 aa7.76□□□□□ -1.17
PRKCSH-209ENST00000589838 MT1XP80297 61 aa7.75□□□□□ -1.17
PRKCSH-209ENST00000589838 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
PRKCSH-209ENST00000589838 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
PRKCSH-209ENST00000589838 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
PRKCSH-209ENST00000589838 PRO2289Q9P1D8 64 aa7.66□□□□□ -1.18
PRKCSH-209ENST00000589838 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
PRKCSH-209ENST00000589838 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
PRKCSH-209ENST00000589838 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
PRKCSH-209ENST00000589838 LCE2BO14633 110 aa7.51□□□□□ -1.21
PRKCSH-209ENST00000589838 KRTAP10-7P60409 375 aaPredicted RBP7.48□□□□□ -1.21
PRKCSH-209ENST00000589838 KRTAP12-3P60328 96 aa7.43□□□□□ -1.22
PRKCSH-209ENST00000589838 A0A0A0MQY5 61 aa7.17□□□□□ -1.26
PRKCSH-209ENST00000589838 KRTAP19-5Q3LI72 72 aa7.16□□□□□ -1.26
PRKCSH-209ENST00000589838 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
PRKCSH-209ENST00000589838 USH2AO75445 5202 aa7.1□□□□□ -1.27
PRKCSH-209ENST00000589838 KRTAP4-8A0A0G2JLE6 195 aa7.02□□□□□ -1.28
PRKCSH-209ENST00000589838 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.28
PRKCSH-209ENST00000589838 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
PRKCSH-209ENST00000589838 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
PRKCSH-209ENST00000589838 KRTAP19-6Q3LI70 58 aa6.92□□□□□ -1.3
PRKCSH-209ENST00000589838 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
PRKCSH-209ENST00000589838 FSIP2Q5CZC0 6907 aa6.9□□□□□ -1.3
PRKCSH-209ENST00000589838 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.3
PRKCSH-209ENST00000589838 SSPOA2VEC9 5147 aa6.87□□□□□ -1.31
PRKCSH-209ENST00000589838 KMT2DO14686 5537 aa6.81□□□□□ -1.32
PRKCSH-209ENST00000589838 MT1EP04732 61 aa6.75□□□□□ -1.33
PRKCSH-209ENST00000589838 MT1LQ93083 61 aa6.72□□□□□ -1.33
PRKCSH-209ENST00000589838 CRCT1Q9UGL9 99 aa6.72□□□□□ -1.33
PRKCSH-209ENST00000589838 KRTAP9-6A8MVA2 160 aa6.6□□□□□ -1.35
PRKCSH-209ENST00000589838 KRTAP9-6A0A140TA67 174 aa6.59□□□□□ -1.35
PRKCSH-209ENST00000589838 INE1O15225 51 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms