RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 A0A087WVE0 104 aa4.61□□□□□ -1.67
PTPN2-208ENST00000589216 TRAV22A0A0B4J277 110 aa4.6□□□□□ -1.67
PTPN2-208ENST00000589216 HIST1H4AP62805 103 aaKnown RBP4.6□□□□□ -1.67
PTPN2-208ENST00000589216 C5orf47Q569G3 176 aa4.6□□□□□ -1.67
PTPN2-208ENST00000589216 C1orf64Q8NEQ6 169 aa4.6□□□□□ -1.67
PTPN2-208ENST00000589216 LCA10Q71F78 164 aa4.58□□□□□ -1.68
PTPN2-208ENST00000589216 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
PTPN2-208ENST00000589216 S4R3F8 94 aa4.58□□□□□ -1.68
PTPN2-208ENST00000589216 LINC00643Q86TS7 51 aa4.56□□□□□ -1.68
PTPN2-208ENST00000589216 LOC101927531A0A1B0GV80 90 aa4.54□□□□□ -1.68
PTPN2-208ENST00000589216 H0Y9P7 68 aa4.54□□□□□ -1.68
PTPN2-208ENST00000589216 H3BS24 57 aa4.54□□□□□ -1.68
PTPN2-208ENST00000589216 UQCRQO14949 82 aa4.52□□□□□ -1.69
PTPN2-208ENST00000589216 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
PTPN2-208ENST00000589216 FAM236AA0A1B0GUQ0 79 aa4.49□□□□□ -1.69
PTPN2-208ENST00000589216 FAM236BA0A1B0GV22 79 aa4.49□□□□□ -1.69
PTPN2-208ENST00000589216 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
PTPN2-208ENST00000589216 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
PTPN2-208ENST00000589216 ATOX1O00244 68 aa4.48□□□□□ -1.69
PTPN2-208ENST00000589216 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
PTPN2-208ENST00000589216 MACF1Q9UPN3 7388 aaKnown RBP4.47□□□□□ -1.69
PTPN2-208ENST00000589216 LINC00208Q96KT6 92 aa4.46□□□□□ -1.7
PTPN2-208ENST00000589216 MT1BP07438 61 aa4.45□□□□□ -1.7
PTPN2-208ENST00000589216 J3QR89 54 aa4.43□□□□□ -1.7
PTPN2-208ENST00000589216 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
PTPN2-208ENST00000589216 KRTAP19-8Q3LI54 63 aa4.41□□□□□ -1.7
PTPN2-208ENST00000589216 MP68P56378 58 aa4.4□□□□□ -1.71
PTPN2-208ENST00000589216 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
PTPN2-208ENST00000589216 MT-ATP8P03928 68 aa4.38□□□□□ -1.71
PTPN2-208ENST00000589216 A8MUN3 132 aa4.37□□□□□ -1.71
PTPN2-208ENST00000589216 Q5VV11 94 aa4.37□□□□□ -1.71
PTPN2-208ENST00000589216 NDUFC1O43677 76 aa4.36□□□□□ -1.71
PTPN2-208ENST00000589216 H0YAA0 97 aa4.34□□□□□ -1.71
PTPN2-208ENST00000589216 SCGB1A1P11684 91 aa4.34□□□□□ -1.71
PTPN2-208ENST00000589216 IMUPQ9GZP8 106 aa4.34□□□□□ -1.71
PTPN2-208ENST00000589216 H3BPC8 53 aa4.33□□□□□ -1.72
PTPN2-208ENST00000589216 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
PTPN2-208ENST00000589216 K7ERU9 68 aa4.32□□□□□ -1.72
PTPN2-208ENST00000589216 ADM2Q7Z4H4 148 aa4.32□□□□□ -1.72
PTPN2-208ENST00000589216 A6NN06 94 aa4.31□□□□□ -1.72
PTPN2-208ENST00000589216 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
PTPN2-208ENST00000589216 CRIPTQ9P021 101 aa4.3□□□□□ -1.72
PTPN2-208ENST00000589216 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
PTPN2-208ENST00000589216 P0C880 135 aa4.27□□□□□ -1.73
PTPN2-208ENST00000589216 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
PTPN2-208ENST00000589216 SMIM20Q8N5G0 67 aa4.22□□□□□ -1.73
PTPN2-208ENST00000589216 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
PTPN2-208ENST00000589216 M0QZ58 72 aa4.18□□□□□ -1.74
PTPN2-208ENST00000589216 MT1XP80297 61 aa4.18□□□□□ -1.74
PTPN2-208ENST00000589216 R4GN34 69 aa4.18□□□□□ -1.74
PTPN2-208ENST00000589216 ACYP2P14621 99 aa4.16□□□□□ -1.74
PTPN2-208ENST00000589216 C20orf197Q8N268 126 aa4.16□□□□□ -1.74
PTPN2-208ENST00000589216 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
PTPN2-208ENST00000589216 NEBP20929 6669 aa4.14□□□□□ -1.75
PTPN2-208ENST00000589216 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
PTPN2-208ENST00000589216 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
PTPN2-208ENST00000589216 KMT2DO14686 5537 aa4.1□□□□□ -1.75
PTPN2-208ENST00000589216 CHKB-CPT1BH3BT56 60 aa4.1□□□□□ -1.75
PTPN2-208ENST00000589216 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
PTPN2-208ENST00000589216 SPANXA2-OT1Q8N9U9 137 aa4.1□□□□□ -1.75
PTPN2-208ENST00000589216 PLAC4Q8WY50 150 aa4.1□□□□□ -1.75
PTPN2-208ENST00000589216 SPTSSBQ8NFR3 76 aa4.08□□□□□ -1.76
PTPN2-208ENST00000589216 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
PTPN2-208ENST00000589216 CYSTM1Q9H1C7 97 aa4.06□□□□□ -1.76
PTPN2-208ENST00000589216 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
PTPN2-208ENST00000589216 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
PTPN2-208ENST00000589216 COA5Q86WW8 74 aa4.03□□□□□ -1.76
PTPN2-208ENST00000589216 COX7CP15954 63 aa4.02□□□□□ -1.77
PTPN2-208ENST00000589216 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
PTPN2-208ENST00000589216 H7BZZ5 65 aa3.99□□□□□ -1.77
PTPN2-208ENST00000589216 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
PTPN2-208ENST00000589216 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
PTPN2-208ENST00000589216 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
PTPN2-208ENST00000589216 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
PTPN2-208ENST00000589216 SPRR2EP22531 72 aa3.91□□□□□ -1.78
PTPN2-208ENST00000589216 SPRR2BP35325 72 aa3.91□□□□□ -1.78
PTPN2-208ENST00000589216 SPRR2AP35326 72 aa3.91□□□□□ -1.78
PTPN2-208ENST00000589216 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
PTPN2-208ENST00000589216 ANAPC13Q9BS18 74 aa3.9□□□□□ -1.79
PTPN2-208ENST00000589216 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
PTPN2-208ENST00000589216 CCDC179H3BU77 68 aa3.88□□□□□ -1.79
PTPN2-208ENST00000589216 SPATA8Q6RVD6 105 aa3.88□□□□□ -1.79
PTPN2-208ENST00000589216 A0A0D9SG42 100 aa3.87□□□□□ -1.79
PTPN2-208ENST00000589216 SEC61GP60059 68 aa3.84□□□□□ -1.79
PTPN2-208ENST00000589216 CAMK2N1Q7Z7J9 78 aa3.84□□□□□ -1.79
PTPN2-208ENST00000589216 SERP1Q9Y6X1 66 aa3.84□□□□□ -1.79
PTPN2-208ENST00000589216 A0A1B0GU33 70 aa3.83□□□□□ -1.8
PTPN2-208ENST00000589216 PCP4P48539 62 aa3.83□□□□□ -1.8
PTPN2-208ENST00000589216 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
PTPN2-208ENST00000589216 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
PTPN2-208ENST00000589216 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
PTPN2-208ENST00000589216 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
PTPN2-208ENST00000589216 SPRR2DP22532 72 aa3.78□□□□□ -1.8
PTPN2-208ENST00000589216 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
PTPN2-208ENST00000589216 A0A1B0GU69 56 aa3.77□□□□□ -1.81
PTPN2-208ENST00000589216 A8MU10 97 aa3.76□□□□□ -1.81
PTPN2-208ENST00000589216 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
PTPN2-208ENST00000589216 ATP5EP56381 51 aaPredicted RBP3.73□□□□□ -1.81
PTPN2-208ENST00000589216 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
PTPN2-208ENST00000589216 MT1EP04732 61 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms