RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 KRTAP9-8Q9BYQ0 159 aa9.57□□□□□ -0.88
DNMT1-216ENST00000588952 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
DNMT1-216ENST00000588952 H7BZZ5 65 aa9.53□□□□□ -0.88
DNMT1-216ENST00000588952 NDUFC1O43677 76 aa9.5□□□□□ -0.89
DNMT1-216ENST00000588952 MT2AP02795 61 aa9.5□□□□□ -0.89
DNMT1-216ENST00000588952 CSAG1Q6PB30 78 aa9.48□□□□□ -0.89
DNMT1-216ENST00000588952 ACYP2P14621 99 aa9.46□□□□□ -0.9
DNMT1-216ENST00000588952 MT1FP04733 61 aa9.44□□□□□ -0.9
DNMT1-216ENST00000588952 KRTAP10-10P60014 251 aa9.35□□□□□ -0.91
DNMT1-216ENST00000588952 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
DNMT1-216ENST00000588952 COA5Q86WW8 74 aa9.29□□□□□ -0.92
DNMT1-216ENST00000588952 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
DNMT1-216ENST00000588952 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
DNMT1-216ENST00000588952 H0YAA0 97 aa9.22□□□□□ -0.93
DNMT1-216ENST00000588952 KRTAP9-2Q9BYQ4 174 aa9.21□□□□□ -0.94
DNMT1-216ENST00000588952 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
DNMT1-216ENST00000588952 TMEM258P61165 79 aa9.19□□□□□ -0.94
DNMT1-216ENST00000588952 SPTSSBQ8NFR3 76 aa9.19□□□□□ -0.94
DNMT1-216ENST00000588952 ATP5EP56381 51 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-216ENST00000588952 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
DNMT1-216ENST00000588952 PCP4P48539 62 aa9.17□□□□□ -0.94
DNMT1-216ENST00000588952 LCE2BO14633 110 aa9.1□□□□□ -0.95
DNMT1-216ENST00000588952 P0C880 135 aa9.09□□□□□ -0.95
DNMT1-216ENST00000588952 KRTAP19-1Q8IUB9 90 aa9.07□□□□□ -0.96
DNMT1-216ENST00000588952 SPRR2GQ9BYE4 73 aa8.99□□□□□ -0.97
DNMT1-216ENST00000588952 CRIPTQ9P021 101 aa8.98□□□□□ -0.97
DNMT1-216ENST00000588952 USH2AO75445 5202 aa8.97□□□□□ -0.97
DNMT1-216ENST00000588952 SERP1Q9Y6X1 66 aa8.91□□□□□ -0.98
DNMT1-216ENST00000588952 KRTAP19-8Q3LI54 63 aa8.86□□□□□ -0.99
DNMT1-216ENST00000588952 R4GN34 69 aa8.85□□□□□ -0.99
DNMT1-216ENST00000588952 M0QZ58 72 aa8.84□□□□□ -0.99
DNMT1-216ENST00000588952 MT1BP07438 61 aa8.82□□□□□ -1
DNMT1-216ENST00000588952 SEC61GP60059 68 aa8.81□□□□□ -1
DNMT1-216ENST00000588952 FSIP2Q5CZC0 6907 aa8.81□□□□□ -1
DNMT1-216ENST00000588952 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
DNMT1-216ENST00000588952 SSPOA2VEC9 5147 aa8.79□□□□□ -1
DNMT1-216ENST00000588952 Q5VV11 94 aa8.77□□□□□ -1.01
DNMT1-216ENST00000588952 KRTAP13-4Q3LI77 160 aa8.76□□□□□ -1.01
DNMT1-216ENST00000588952 A0A1B0GU69 56 aa8.75□□□□□ -1.01
DNMT1-216ENST00000588952 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
DNMT1-216ENST00000588952 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
DNMT1-216ENST00000588952 LINC01554Q52M75 96 aa8.69□□□□□ -1.02
DNMT1-216ENST00000588952 A0A1B0GU33 70 aa8.66□□□□□ -1.02
DNMT1-216ENST00000588952 KRTAP19-6Q3LI70 58 aa8.64□□□□□ -1.03
DNMT1-216ENST00000588952 RPS28P62857 69 aaKnown RBP8.62□□□□□ -1.03
DNMT1-216ENST00000588952 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
DNMT1-216ENST00000588952 PRR15LQ9BU68 103 aa8.61□□□□□ -1.03
DNMT1-216ENST00000588952 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
DNMT1-216ENST00000588952 Q1T7F1 81 aa8.56□□□□□ -1.04
DNMT1-216ENST00000588952 PLAC4Q8WY50 150 aa8.52□□□□□ -1.05
DNMT1-216ENST00000588952 V9GYY9 64 aa8.52□□□□□ -1.05
DNMT1-216ENST00000588952 A0A0D9SG42 100 aa8.5□□□□□ -1.05
DNMT1-216ENST00000588952 A6NN06 94 aa8.49□□□□□ -1.05
DNMT1-216ENST00000588952 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-216ENST00000588952 PSPHP1O15172 72 aa8.47□□□□□ -1.05
DNMT1-216ENST00000588952 KRTAP10-5P60370 271 aa8.46□□□□□ -1.06
DNMT1-216ENST00000588952 A8MU10 97 aa8.43□□□□□ -1.06
DNMT1-216ENST00000588952 MT1XP80297 61 aa8.41□□□□□ -1.06
DNMT1-216ENST00000588952 UQCR11O14957 56 aa8.37□□□□□ -1.07
DNMT1-216ENST00000588952 KRTAP12-1P59990 96 aa8.36□□□□□ -1.07
DNMT1-216ENST00000588952 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
DNMT1-216ENST00000588952 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
DNMT1-216ENST00000588952 PRO2289Q9P1D8 64 aa8.27□□□□□ -1.09
DNMT1-216ENST00000588952 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
DNMT1-216ENST00000588952 CAMK2N1Q7Z7J9 78 aa8.22□□□□□ -1.09
DNMT1-216ENST00000588952 A6NED7 52 aa8.18□□□□□ -1.1
DNMT1-216ENST00000588952 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
DNMT1-216ENST00000588952 KRTAP10-7P60409 375 aaPredicted RBP8.05□□□□□ -1.12
DNMT1-216ENST00000588952 MACF1Q9UPN3 7388 aaKnown RBP8.04□□□□□ -1.12
DNMT1-216ENST00000588952 KRTAP10-12P60413 245 aa7.96□□□□□ -1.14
DNMT1-216ENST00000588952 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
DNMT1-216ENST00000588952 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
DNMT1-216ENST00000588952 K7ERS5 55 aa7.91□□□□□ -1.14
DNMT1-216ENST00000588952 KMT2DO14686 5537 aa7.89□□□□□ -1.15
DNMT1-216ENST00000588952 KRTAP9-7A8MTY7 169 aa7.88□□□□□ -1.15
DNMT1-216ENST00000588952 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
DNMT1-216ENST00000588952 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
DNMT1-216ENST00000588952 SYNE2Q8WXH0 6885 aaKnown RBP7.85□□□□□ -1.15
DNMT1-216ENST00000588952 KRTAP6-3Q3LI67 103 aa7.8□□□□□ -1.16
DNMT1-216ENST00000588952 KRTAP8-1Q8IUC2 63 aa7.75□□□□□ -1.17
DNMT1-216ENST00000588952 TNP1P09430 55 aa7.72□□□□□ -1.17
DNMT1-216ENST00000588952 KRTAP5-9P26371 169 aa7.7□□□□□ -1.18
DNMT1-216ENST00000588952 BRK1Q8WUW1 75 aa7.69□□□□□ -1.18
DNMT1-216ENST00000588952 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
DNMT1-216ENST00000588952 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
DNMT1-216ENST00000588952 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
DNMT1-216ENST00000588952 ROMO1P60602 79 aa7.57□□□□□ -1.2
DNMT1-216ENST00000588952 MUC12Q9UKN1 5478 aa7.53□□□□□ -1.2
DNMT1-216ENST00000588952 KRTAP19-7Q3SYF9 63 aa7.51□□□□□ -1.21
DNMT1-216ENST00000588952 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
DNMT1-216ENST00000588952 MT1EP04732 61 aa7.41□□□□□ -1.22
DNMT1-216ENST00000588952 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
DNMT1-216ENST00000588952 H3BS24 57 aa7.4□□□□□ -1.22
DNMT1-216ENST00000588952 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
DNMT1-216ENST00000588952 SPRR2EP22531 72 aa7.36□□□□□ -1.23
DNMT1-216ENST00000588952 SPRR2BP35325 72 aa7.36□□□□□ -1.23
DNMT1-216ENST00000588952 SPRR2AP35326 72 aa7.36□□□□□ -1.23
DNMT1-216ENST00000588952 NEBP20929 6669 aa7.34□□□□□ -1.23
DNMT1-216ENST00000588952 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
DNMT1-216ENST00000588952 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms