RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
CNTD1-204ENST00000588408 CSAG1Q6PB30 78 aa7.32□□□□□ -1.24
CNTD1-204ENST00000588408 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
CNTD1-204ENST00000588408 UQCR11O14957 56 aa7.3□□□□□ -1.24
CNTD1-204ENST00000588408 LCE2DQ5TA82 110 aaPredicted RBP7.28□□□□□ -1.24
CNTD1-204ENST00000588408 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
CNTD1-204ENST00000588408 LPAP08519 4548 aa7.25□□□□□ -1.25
CNTD1-204ENST00000588408 XP32Q5T750 250 aa7.24□□□□□ -1.25
CNTD1-204ENST00000588408 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
CNTD1-204ENST00000588408 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
CNTD1-204ENST00000588408 ABCA13Q86UQ4 5058 aa7.2□□□□□ -1.26
CNTD1-204ENST00000588408 LRP2P98164 4655 aa7.19□□□□□ -1.26
CNTD1-204ENST00000588408 KRTAP4-5Q9BYR2 181 aa7.15□□□□□ -1.26
CNTD1-204ENST00000588408 ROMO1P60602 79 aa7.15□□□□□ -1.27
CNTD1-204ENST00000588408 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
CNTD1-204ENST00000588408 H0YAA0 97 aa7.09□□□□□ -1.27
CNTD1-204ENST00000588408 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
CNTD1-204ENST00000588408 A0A1B0GU33 70 aa7.04□□□□□ -1.28
CNTD1-204ENST00000588408 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CNTD1-204ENST00000588408 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
CNTD1-204ENST00000588408 S4R3F8 94 aa6.97□□□□□ -1.29
CNTD1-204ENST00000588408 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
CNTD1-204ENST00000588408 HERC2O95714 4834 aa6.94□□□□□ -1.3
CNTD1-204ENST00000588408 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
CNTD1-204ENST00000588408 P0C880 135 aa6.93□□□□□ -1.3
CNTD1-204ENST00000588408 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.31
CNTD1-204ENST00000588408 MUC17Q685J3 4493 aa6.86□□□□□ -1.31
CNTD1-204ENST00000588408 A0A0D9SG42 100 aa6.81□□□□□ -1.32
CNTD1-204ENST00000588408 BIRC6Q9NR09 4857 aa6.79□□□□□ -1.32
CNTD1-204ENST00000588408 J3QL48 77 aa6.77□□□□□ -1.32
CNTD1-204ENST00000588408 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.32
CNTD1-204ENST00000588408 K7ERS5 55 aa6.73□□□□□ -1.33
CNTD1-204ENST00000588408 MUC2Q02817 5179 aa6.72□□□□□ -1.33
CNTD1-204ENST00000588408 CRIPTQ9P021 101 aa6.7□□□□□ -1.34
CNTD1-204ENST00000588408 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
CNTD1-204ENST00000588408 HERC1Q15751 4861 aa6.67□□□□□ -1.34
CNTD1-204ENST00000588408 PCLOQ9Y6V0 5065 aa6.65□□□□□ -1.34
CNTD1-204ENST00000588408 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.34
CNTD1-204ENST00000588408 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
CNTD1-204ENST00000588408 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
CNTD1-204ENST00000588408 NDUFAF8A1L188 74 aa6.61□□□□□ -1.35
CNTD1-204ENST00000588408 KRTAP19-2Q3LHN2 52 aa6.6□□□□□ -1.35
CNTD1-204ENST00000588408 A0A0A0MQY5 61 aa6.59□□□□□ -1.35
CNTD1-204ENST00000588408 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
CNTD1-204ENST00000588408 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
CNTD1-204ENST00000588408 HMCN2Q8NDA2 5059 aa6.54□□□□□ -1.36
CNTD1-204ENST00000588408 M0QZ58 72 aa6.52□□□□□ -1.37
CNTD1-204ENST00000588408 FLGP20930 4061 aaPredicted RBP6.49□□□□□ -1.37
CNTD1-204ENST00000588408 R4GN34 69 aa6.46□□□□□ -1.38
CNTD1-204ENST00000588408 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
CNTD1-204ENST00000588408 FAT4Q6V0I7 4981 aa6.41□□□□□ -1.38
CNTD1-204ENST00000588408 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
CNTD1-204ENST00000588408 UBR4Q5T4S7 5183 aa6.31□□□□□ -1.4
CNTD1-204ENST00000588408 LCE2CQ5TA81 110 aa6.28□□□□□ -1.4
CNTD1-204ENST00000588408 LUZP6Q538Z0 58 aa6.26□□□□□ -1.41
CNTD1-204ENST00000588408 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
CNTD1-204ENST00000588408 MT1HP80294 61 aa6.09□□□□□ -1.43
CNTD1-204ENST00000588408 M0R2T5 61 aa6.07□□□□□ -1.44
CNTD1-204ENST00000588408 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
CNTD1-204ENST00000588408 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
CNTD1-204ENST00000588408 MT1FP04733 61 aa5.98□□□□□ -1.45
CNTD1-204ENST00000588408 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
CNTD1-204ENST00000588408 MT2AP02795 61 aa5.96□□□□□ -1.46
CNTD1-204ENST00000588408 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
CNTD1-204ENST00000588408 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
CNTD1-204ENST00000588408 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
CNTD1-204ENST00000588408 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
CNTD1-204ENST00000588408 TNP1P09430 55 aa5.83□□□□□ -1.48
CNTD1-204ENST00000588408 LCE2BO14633 110 aa5.8□□□□□ -1.48
CNTD1-204ENST00000588408 PP632Q6XCG6 107 aa5.8□□□□□ -1.48
CNTD1-204ENST00000588408 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
CNTD1-204ENST00000588408 MT1BP07438 61 aa5.72□□□□□ -1.49
CNTD1-204ENST00000588408 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
CNTD1-204ENST00000588408 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
CNTD1-204ENST00000588408 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
CNTD1-204ENST00000588408 MT1XP80297 61 aa5.64□□□□□ -1.51
CNTD1-204ENST00000588408 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
CNTD1-204ENST00000588408 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
CNTD1-204ENST00000588408 USH2AO75445 5202 aa5.58□□□□□ -1.52
CNTD1-204ENST00000588408 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
CNTD1-204ENST00000588408 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
CNTD1-204ENST00000588408 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
CNTD1-204ENST00000588408 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
CNTD1-204ENST00000588408 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
CNTD1-204ENST00000588408 KMT2DO14686 5537 aa5.41□□□□□ -1.54
CNTD1-204ENST00000588408 INE1O15225 51 aa5.4□□□□□ -1.54
CNTD1-204ENST00000588408 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
CNTD1-204ENST00000588408 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
CNTD1-204ENST00000588408 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
CNTD1-204ENST00000588408 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
CNTD1-204ENST00000588408 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
CNTD1-204ENST00000588408 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
CNTD1-204ENST00000588408 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
CNTD1-204ENST00000588408 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
CNTD1-204ENST00000588408 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
CNTD1-204ENST00000588408 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
CNTD1-204ENST00000588408 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
CNTD1-204ENST00000588408 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
CNTD1-204ENST00000588408 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
CNTD1-204ENST00000588408 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms