RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
NEDD4L-220ENST00000587881 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.21
NEDD4L-220ENST00000587881 Q5VSD8 79 aa7.46□□□□□ -1.22
NEDD4L-220ENST00000587881 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
NEDD4L-220ENST00000587881 LINC01554Q52M75 96 aa7.43□□□□□ -1.22
NEDD4L-220ENST00000587881 XP32Q5T750 250 aa7.4□□□□□ -1.22
NEDD4L-220ENST00000587881 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.22
NEDD4L-220ENST00000587881 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
NEDD4L-220ENST00000587881 KMT2CQ8NEZ4 4911 aaKnown RBP7.4□□□□□ -1.23
NEDD4L-220ENST00000587881 K7ERS5 55 aa7.38□□□□□ -1.23
NEDD4L-220ENST00000587881 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
NEDD4L-220ENST00000587881 HSPG2P98160 4391 aa7.36□□□□□ -1.23
NEDD4L-220ENST00000587881 H3BS24 57 aa7.33□□□□□ -1.24
NEDD4L-220ENST00000587881 S4R3F8 94 aa7.33□□□□□ -1.24
NEDD4L-220ENST00000587881 KRTAP10-6P60371 365 aaPredicted RBP7.32□□□□□ -1.24
NEDD4L-220ENST00000587881 RYR1P21817 5038 aa7.3□□□□□ -1.24
NEDD4L-220ENST00000587881 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
NEDD4L-220ENST00000587881 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
NEDD4L-220ENST00000587881 KRTAP17-1Q9BYP8 105 aa7.24□□□□□ -1.25
NEDD4L-220ENST00000587881 LORP23490 312 aaPredicted RBP7.23□□□□□ -1.25
NEDD4L-220ENST00000587881 KRTAP13-4Q3LI77 160 aa7.21□□□□□ -1.26
NEDD4L-220ENST00000587881 MYCBP2O75592 4640 aa7.19□□□□□ -1.26
NEDD4L-220ENST00000587881 ROMO1P60602 79 aa7.18□□□□□ -1.26
NEDD4L-220ENST00000587881 A0A0D9SG42 100 aa7.17□□□□□ -1.26
NEDD4L-220ENST00000587881 P0C880 135 aa7.15□□□□□ -1.26
NEDD4L-220ENST00000587881 RYR3Q15413 4870 aa7.15□□□□□ -1.27
NEDD4L-220ENST00000587881 TPRXLQ17RH7 258 aa7.15□□□□□ -1.27
NEDD4L-220ENST00000587881 KIAA1109Q2LD37 5005 aa7.1□□□□□ -1.27
NEDD4L-220ENST00000587881 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
NEDD4L-220ENST00000587881 M0QZ58 72 aa7□□□□□ -1.29
NEDD4L-220ENST00000587881 KRTAP12-2P59991 146 aa7□□□□□ -1.29
NEDD4L-220ENST00000587881 LRP2P98164 4655 aa7□□□□□ -1.29
NEDD4L-220ENST00000587881 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
NEDD4L-220ENST00000587881 LPAP08519 4548 aa6.96□□□□□ -1.29
NEDD4L-220ENST00000587881 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
NEDD4L-220ENST00000587881 EPPK1P58107 5090 aaKnown RBP6.9□□□□□ -1.31
NEDD4L-220ENST00000587881 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
NEDD4L-220ENST00000587881 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
NEDD4L-220ENST00000587881 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
NEDD4L-220ENST00000587881 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
NEDD4L-220ENST00000587881 R4GN34 69 aa6.8□□□□□ -1.32
NEDD4L-220ENST00000587881 MUC17Q685J3 4493 aa6.75□□□□□ -1.33
NEDD4L-220ENST00000587881 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
NEDD4L-220ENST00000587881 KRTAP19-2Q3LHN2 52 aa6.64□□□□□ -1.35
NEDD4L-220ENST00000587881 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
NEDD4L-220ENST00000587881 HERC2O95714 4834 aa6.56□□□□□ -1.36
NEDD4L-220ENST00000587881 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
NEDD4L-220ENST00000587881 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
NEDD4L-220ENST00000587881 BIRC6Q9NR09 4857 aa6.43□□□□□ -1.38
NEDD4L-220ENST00000587881 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
NEDD4L-220ENST00000587881 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
NEDD4L-220ENST00000587881 PLAC4Q8WY50 150 aa6.36□□□□□ -1.39
NEDD4L-220ENST00000587881 MUC2Q02817 5179 aa6.36□□□□□ -1.39
NEDD4L-220ENST00000587881 HERC1Q15751 4861 aa6.3□□□□□ -1.4
NEDD4L-220ENST00000587881 TNP1P09430 55 aa6.24□□□□□ -1.41
NEDD4L-220ENST00000587881 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
NEDD4L-220ENST00000587881 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
NEDD4L-220ENST00000587881 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
NEDD4L-220ENST00000587881 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
NEDD4L-220ENST00000587881 M0R2T5 61 aa6.1□□□□□ -1.43
NEDD4L-220ENST00000587881 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
NEDD4L-220ENST00000587881 LUZP6Q538Z0 58 aa6.07□□□□□ -1.44
NEDD4L-220ENST00000587881 MT1HP80294 61 aa6.06□□□□□ -1.44
NEDD4L-220ENST00000587881 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
NEDD4L-220ENST00000587881 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
NEDD4L-220ENST00000587881 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
NEDD4L-220ENST00000587881 MT2AP02795 61 aa5.97□□□□□ -1.45
NEDD4L-220ENST00000587881 MT1FP04733 61 aa5.96□□□□□ -1.46
NEDD4L-220ENST00000587881 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
NEDD4L-220ENST00000587881 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
NEDD4L-220ENST00000587881 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
NEDD4L-220ENST00000587881 UBR4Q5T4S7 5183 aa5.9□□□□□ -1.47
NEDD4L-220ENST00000587881 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
NEDD4L-220ENST00000587881 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
NEDD4L-220ENST00000587881 MT1BP07438 61 aa5.77□□□□□ -1.49
NEDD4L-220ENST00000587881 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
NEDD4L-220ENST00000587881 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
NEDD4L-220ENST00000587881 MT1XP80297 61 aa5.74□□□□□ -1.49
NEDD4L-220ENST00000587881 KRTAP9-3Q9BYQ3 159 aa5.69□□□□□ -1.5
NEDD4L-220ENST00000587881 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
NEDD4L-220ENST00000587881 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
NEDD4L-220ENST00000587881 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
NEDD4L-220ENST00000587881 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
NEDD4L-220ENST00000587881 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
NEDD4L-220ENST00000587881 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
NEDD4L-220ENST00000587881 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
NEDD4L-220ENST00000587881 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
NEDD4L-220ENST00000587881 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
NEDD4L-220ENST00000587881 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
NEDD4L-220ENST00000587881 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
NEDD4L-220ENST00000587881 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
NEDD4L-220ENST00000587881 INE1O15225 51 aa5.25□□□□□ -1.57
NEDD4L-220ENST00000587881 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
NEDD4L-220ENST00000587881 USH2AO75445 5202 aa5.2□□□□□ -1.58
NEDD4L-220ENST00000587881 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
NEDD4L-220ENST00000587881 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
NEDD4L-220ENST00000587881 KMT2DO14686 5537 aa5.17□□□□□ -1.58
NEDD4L-220ENST00000587881 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
NEDD4L-220ENST00000587881 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
NEDD4L-220ENST00000587881 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms