RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KLKP1Q107X0 134 aa6.78□□□□□ -1.32
ATG4D-207ENST00000587256 A8MUN3 132 aa6.77□□□□□ -1.33
ATG4D-207ENST00000587256 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
ATG4D-207ENST00000587256 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
ATG4D-207ENST00000587256 K7ERU9 68 aa6.74□□□□□ -1.33
ATG4D-207ENST00000587256 NDUFC1O43677 76 aa6.74□□□□□ -1.33
ATG4D-207ENST00000587256 H3BPC8 53 aa6.73□□□□□ -1.33
ATG4D-207ENST00000587256 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
ATG4D-207ENST00000587256 IMUPQ9GZP8 106 aa6.69□□□□□ -1.34
ATG4D-207ENST00000587256 SPRR2GQ9BYE4 73 aa6.67□□□□□ -1.34
ATG4D-207ENST00000587256 KRTAP9-7A8MTY7 169 aa6.65□□□□□ -1.34
ATG4D-207ENST00000587256 Q5VV11 94 aa6.65□□□□□ -1.34
ATG4D-207ENST00000587256 CRIPTQ9P021 101 aa6.63□□□□□ -1.35
ATG4D-207ENST00000587256 H0YAA0 97 aa6.62□□□□□ -1.35
ATG4D-207ENST00000587256 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
ATG4D-207ENST00000587256 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
ATG4D-207ENST00000587256 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
ATG4D-207ENST00000587256 MT1BP07438 61 aa6.6□□□□□ -1.35
ATG4D-207ENST00000587256 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
ATG4D-207ENST00000587256 TRAV7A0A075B6U4 112 aa6.59□□□□□ -1.35
ATG4D-207ENST00000587256 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
ATG4D-207ENST00000587256 A6NN06 94 aa6.53□□□□□ -1.36
ATG4D-207ENST00000587256 SYNE2Q8WXH0 6885 aaKnown RBP6.51□□□□□ -1.37
ATG4D-207ENST00000587256 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
ATG4D-207ENST00000587256 ACYP2P14621 99 aa6.46□□□□□ -1.38
ATG4D-207ENST00000587256 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
ATG4D-207ENST00000587256 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
ATG4D-207ENST00000587256 R4GN34 69 aa6.43□□□□□ -1.38
ATG4D-207ENST00000587256 P0C880 135 aa6.42□□□□□ -1.38
ATG4D-207ENST00000587256 SERP2Q8N6R1 65 aa6.41□□□□□ -1.38
ATG4D-207ENST00000587256 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
ATG4D-207ENST00000587256 SPTSSBQ8NFR3 76 aa6.4□□□□□ -1.38
ATG4D-207ENST00000587256 M0QZ58 72 aa6.39□□□□□ -1.39
ATG4D-207ENST00000587256 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
ATG4D-207ENST00000587256 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
ATG4D-207ENST00000587256 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
ATG4D-207ENST00000587256 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
ATG4D-207ENST00000587256 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
ATG4D-207ENST00000587256 PRO2289Q9P1D8 64 aa6.28□□□□□ -1.4
ATG4D-207ENST00000587256 COX7CP15954 63 aa6.23□□□□□ -1.41
ATG4D-207ENST00000587256 MT1XP80297 61 aa6.22□□□□□ -1.41
ATG4D-207ENST00000587256 COA5Q86WW8 74 aa6.18□□□□□ -1.42
ATG4D-207ENST00000587256 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.42
ATG4D-207ENST00000587256 NEBP20929 6669 aa6.15□□□□□ -1.42
ATG4D-207ENST00000587256 ANAPC13Q9BS18 74 aa6.13□□□□□ -1.43
ATG4D-207ENST00000587256 CYSTM1Q9H1C7 97 aa6.11□□□□□ -1.43
ATG4D-207ENST00000587256 H7BZZ5 65 aa6.1□□□□□ -1.43
ATG4D-207ENST00000587256 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
ATG4D-207ENST00000587256 KMT2DO14686 5537 aa6.09□□□□□ -1.43
ATG4D-207ENST00000587256 CCDC179H3BU77 68 aa6.06□□□□□ -1.44
ATG4D-207ENST00000587256 SEC61GP60059 68 aa6.06□□□□□ -1.44
ATG4D-207ENST00000587256 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
ATG4D-207ENST00000587256 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
ATG4D-207ENST00000587256 SERP1Q9Y6X1 66 aa6.03□□□□□ -1.44
ATG4D-207ENST00000587256 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
ATG4D-207ENST00000587256 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
ATG4D-207ENST00000587256 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
ATG4D-207ENST00000587256 PCP4P48539 62 aa5.96□□□□□ -1.46
ATG4D-207ENST00000587256 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
ATG4D-207ENST00000587256 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
ATG4D-207ENST00000587256 A0A0D9SG42 100 aa5.92□□□□□ -1.46
ATG4D-207ENST00000587256 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
ATG4D-207ENST00000587256 A0A1B0GU33 70 aa5.91□□□□□ -1.46
ATG4D-207ENST00000587256 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
ATG4D-207ENST00000587256 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
ATG4D-207ENST00000587256 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
ATG4D-207ENST00000587256 A0A1B0GU69 56 aa5.88□□□□□ -1.47
ATG4D-207ENST00000587256 SPRR2EP22531 72 aa5.87□□□□□ -1.47
ATG4D-207ENST00000587256 SPRR2BP35325 72 aa5.87□□□□□ -1.47
ATG4D-207ENST00000587256 SPRR2AP35326 72 aa5.87□□□□□ -1.47
ATG4D-207ENST00000587256 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
ATG4D-207ENST00000587256 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
ATG4D-207ENST00000587256 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
ATG4D-207ENST00000587256 TMEM258P61165 79 aa5.8□□□□□ -1.48
ATG4D-207ENST00000587256 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
ATG4D-207ENST00000587256 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
ATG4D-207ENST00000587256 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
ATG4D-207ENST00000587256 PRR15LQ9BU68 103 aa5.75□□□□□ -1.49
ATG4D-207ENST00000587256 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
ATG4D-207ENST00000587256 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
ATG4D-207ENST00000587256 A8MU10 97 aa5.7□□□□□ -1.5
ATG4D-207ENST00000587256 SPRR2DP22532 72 aa5.69□□□□□ -1.5
ATG4D-207ENST00000587256 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
ATG4D-207ENST00000587256 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
ATG4D-207ENST00000587256 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
ATG4D-207ENST00000587256 UQCR11O14957 56 aa5.53□□□□□ -1.52
ATG4D-207ENST00000587256 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
ATG4D-207ENST00000587256 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
ATG4D-207ENST00000587256 MT1EP04732 61 aa5.52□□□□□ -1.53
ATG4D-207ENST00000587256 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
ATG4D-207ENST00000587256 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
ATG4D-207ENST00000587256 TNP1P09430 55 aa5.48□□□□□ -1.53
ATG4D-207ENST00000587256 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.54
ATG4D-207ENST00000587256 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
ATG4D-207ENST00000587256 Q1T7F1 81 aa5.44□□□□□ -1.54
ATG4D-207ENST00000587256 LCE5AQ5TCM9 118 aa5.43□□□□□ -1.54
ATG4D-207ENST00000587256 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
ATG4D-207ENST00000587256 V9GYY9 64 aa5.41□□□□□ -1.54
ATG4D-207ENST00000587256 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
ATG4D-207ENST00000587256 PSPHP1O15172 72 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms