RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SEC61BP60468 96 aaKnown RBP3.37□□□□□ -1.87
LIG3-206ENST00000586058 RPL37P61927 97 aaKnown RBP3.37□□□□□ -1.87
LIG3-206ENST00000586058 H7BZZ5 65 aa3.36□□□□□ -1.87
LIG3-206ENST00000586058 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
LIG3-206ENST00000586058 FAT1Q14517 4588 aa3.35□□□□□ -1.87
LIG3-206ENST00000586058 SPANXA2-OT1Q8N9U9 137 aa3.34□□□□□ -1.87
LIG3-206ENST00000586058 CYP4F30PQ9H0H9 118 aa3.34□□□□□ -1.87
LIG3-206ENST00000586058 DMBT1Q9UGM3 2413 aaPredicted RBP3.33□□□□□ -1.88
LIG3-206ENST00000586058 CYSTM1Q9H1C7 97 aa3.32□□□□□ -1.88
LIG3-206ENST00000586058 TNXBP22105 4242 aa3.3□□□□□ -1.88
LIG3-206ENST00000586058 SPINK7P58062 85 aa3.3□□□□□ -1.88
LIG3-206ENST00000586058 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
LIG3-206ENST00000586058 A8MUN3 132 aa3.29□□□□□ -1.88
LIG3-206ENST00000586058 HRES1P13985 223 aa3.29□□□□□ -1.88
LIG3-206ENST00000586058 SERP1Q9Y6X1 66 aa3.29□□□□□ -1.88
LIG3-206ENST00000586058 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
LIG3-206ENST00000586058 CHKB-CPT1BH3BT56 60 aa3.28□□□□□ -1.88
LIG3-206ENST00000586058 ACYP2P14621 99 aa3.28□□□□□ -1.88
LIG3-206ENST00000586058 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
LIG3-206ENST00000586058 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
LIG3-206ENST00000586058 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
LIG3-206ENST00000586058 DMAC1Q96GE9 116 aa3.26□□□□□ -1.89
LIG3-206ENST00000586058 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
LIG3-206ENST00000586058 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
LIG3-206ENST00000586058 MYCBP2O75592 4640 aa3.24□□□□□ -1.89
LIG3-206ENST00000586058 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
LIG3-206ENST00000586058 COX6B2Q6YFQ2 88 aa3.23□□□□□ -1.89
LIG3-206ENST00000586058 COA5Q86WW8 74 aa3.23□□□□□ -1.89
LIG3-206ENST00000586058 PSPHP1O15172 72 aa3.22□□□□□ -1.89
LIG3-206ENST00000586058 HERC2O95714 4834 aa3.22□□□□□ -1.89
LIG3-206ENST00000586058 LCA10Q71F78 164 aa3.21□□□□□ -1.9
LIG3-206ENST00000586058 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
LIG3-206ENST00000586058 S4R3F8 94 aa3.18□□□□□ -1.9
LIG3-206ENST00000586058 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
LIG3-206ENST00000586058 PRR15LQ9BU68 103 aa3.16□□□□□ -1.9
LIG3-206ENST00000586058 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
LIG3-206ENST00000586058 MPLKIPQ8TAP9 179 aa3.14□□□□□ -1.91
LIG3-206ENST00000586058 PCLOQ9Y6V0 5065 aa3.14□□□□□ -1.91
LIG3-206ENST00000586058 A0A1B0GU69 56 aa3.11□□□□□ -1.91
LIG3-206ENST00000586058 Q1T7F1 81 aa3.11□□□□□ -1.91
LIG3-206ENST00000586058 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
LIG3-206ENST00000586058 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
LIG3-206ENST00000586058 LINC01558Q9Y6Z2 57 aa3.09□□□□□ -1.91
LIG3-206ENST00000586058 LPAP08519 4548 aa3.08□□□□□ -1.92
LIG3-206ENST00000586058 KRTAP4-1Q9BYQ7 146 aa3.07□□□□□ -1.92
LIG3-206ENST00000586058 A6NN06 94 aa3.06□□□□□ -1.92
LIG3-206ENST00000586058 M0R2T5 61 aa3.04□□□□□ -1.92
LIG3-206ENST00000586058 A6NED7 52 aa3.03□□□□□ -1.92
LIG3-206ENST00000586058 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
LIG3-206ENST00000586058 LRP2P98164 4655 aa3.03□□□□□ -1.92
LIG3-206ENST00000586058 UQCR11O14957 56 aa3.02□□□□□ -1.93
LIG3-206ENST00000586058 MUC17Q685J3 4493 aa3.01□□□□□ -1.93
LIG3-206ENST00000586058 H0YAA0 97 aa3□□□□□ -1.93
LIG3-206ENST00000586058 Q5VV11 94 aa3□□□□□ -1.93
LIG3-206ENST00000586058 ADM2Q7Z4H4 148 aa2.99□□□□□ -1.93
LIG3-206ENST00000586058 A0A1B0GU33 70 aa2.98□□□□□ -1.93
LIG3-206ENST00000586058 HERC1Q15751 4861 aa2.96□□□□□ -1.94
LIG3-206ENST00000586058 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
LIG3-206ENST00000586058 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
LIG3-206ENST00000586058 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
LIG3-206ENST00000586058 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
LIG3-206ENST00000586058 R4GN34 69 aa2.95□□□□□ -1.94
LIG3-206ENST00000586058 K7ERS5 55 aa2.94□□□□□ -1.94
LIG3-206ENST00000586058 M0QZ58 72 aa2.93□□□□□ -1.94
LIG3-206ENST00000586058 MT1HP80294 61 aa2.93□□□□□ -1.94
LIG3-206ENST00000586058 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
LIG3-206ENST00000586058 P0C880 135 aa2.91□□□□□ -1.94
LIG3-206ENST00000586058 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
LIG3-206ENST00000586058 KRTAP10-6P60371 365 aaPredicted RBP2.9□□□□□ -1.95
LIG3-206ENST00000586058 SPATA8Q6RVD6 105 aa2.9□□□□□ -1.95
LIG3-206ENST00000586058 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
LIG3-206ENST00000586058 A0A0D9SG42 100 aa2.87□□□□□ -1.95
LIG3-206ENST00000586058 ROMO1P60602 79 aa2.86□□□□□ -1.95
LIG3-206ENST00000586058 KRTAP10-10P60014 251 aa2.85□□□□□ -1.95
LIG3-206ENST00000586058 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.95
LIG3-206ENST00000586058 A8MU10 97 aa2.84□□□□□ -1.95
LIG3-206ENST00000586058 CAMK2N1Q7Z7J9 78 aa2.84□□□□□ -1.95
LIG3-206ENST00000586058 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
LIG3-206ENST00000586058 MUC2Q02817 5179 aa2.82□□□□□ -1.96
LIG3-206ENST00000586058 RNF213Q63HN8 5207 aa2.82□□□□□ -1.96
LIG3-206ENST00000586058 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
LIG3-206ENST00000586058 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
LIG3-206ENST00000586058 FLGP20930 4061 aaPredicted RBP2.81□□□□□ -1.96
LIG3-206ENST00000586058 MT2AP02795 61 aa2.8□□□□□ -1.96
LIG3-206ENST00000586058 MT1FP04733 61 aa2.78□□□□□ -1.96
LIG3-206ENST00000586058 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
LIG3-206ENST00000586058 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
LIG3-206ENST00000586058 PLAC4Q8WY50 150 aa2.78□□□□□ -1.96
LIG3-206ENST00000586058 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
LIG3-206ENST00000586058 KRTAP12-1P59990 96 aa2.75□□□□□ -1.97
LIG3-206ENST00000586058 KRTAP12-2P59991 146 aa2.74□□□□□ -1.97
LIG3-206ENST00000586058 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
LIG3-206ENST00000586058 FAT4Q6V0I7 4981 aa2.71□□□□□ -1.98
LIG3-206ENST00000586058 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
LIG3-206ENST00000586058 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
LIG3-206ENST00000586058 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
LIG3-206ENST00000586058 TNP1P09430 55 aa2.62□□□□□ -1.99
LIG3-206ENST00000586058 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
LIG3-206ENST00000586058 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
LIG3-206ENST00000586058 MT1BP07438 61 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms