RNA–Protein interactions for RNA: ENST00000584496.1

GRIN2C-205, Transcript of glutamate ionotropic receptor NMDA type subunit 2C, humanhuman

TSL 1 (best)

Gene GRIN2C, Length 1,984 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2C-205ENST00000584496 XP32Q5T750 250 aa11.5□□□□□ -0.57
GRIN2C-205ENST00000584496 DMBT1Q9UGM3 2413 aaPredicted RBP11.4□□□□□ -0.58
GRIN2C-205ENST00000584496 H0YAA0 97 aa11.37□□□□□ -0.59
GRIN2C-205ENST00000584496 MYCBP2O75592 4640 aa11.34□□□□□ -0.59
GRIN2C-205ENST00000584496 A0A1B0GU33 70 aa11.33□□□□□ -0.6
GRIN2C-205ENST00000584496 H1FX-AS1Q4G0G2 97 aa11.33□□□□□ -0.6
GRIN2C-205ENST00000584496 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
GRIN2C-205ENST00000584496 RBM12B-AS1Q9P1G2 102 aa11.28□□□□□ -0.6
GRIN2C-205ENST00000584496 KRTAP4-5Q9BYR2 181 aa11.27□□□□□ -0.61
GRIN2C-205ENST00000584496 ADM2Q7Z4H4 148 aa11.22□□□□□ -0.61
GRIN2C-205ENST00000584496 PRAC1Q96KF2 57 aa11.19□□□□□ -0.62
GRIN2C-205ENST00000584496 TPRXLQ17RH7 258 aa11.17□□□□□ -0.62
GRIN2C-205ENST00000584496 S4R3F8 94 aa11.16□□□□□ -0.62
GRIN2C-205ENST00000584496 KRTAP10-6P60371 365 aaPredicted RBP11.14□□□□□ -0.63
GRIN2C-205ENST00000584496 BIRC6Q9NR09 4857 aa11.1□□□□□ -0.63
GRIN2C-205ENST00000584496 KRTAP3-2Q9BYR7 98 aa11.1□□□□□ -0.63
GRIN2C-205ENST00000584496 LRP2P98164 4655 aa11.03□□□□□ -0.64
GRIN2C-205ENST00000584496 LPAP08519 4548 aa11.03□□□□□ -0.64
GRIN2C-205ENST00000584496 KRTAP13-4Q3LI77 160 aa10.97□□□□□ -0.65
GRIN2C-205ENST00000584496 J3QL48 77 aa10.96□□□□□ -0.65
GRIN2C-205ENST00000584496 ABCA13Q86UQ4 5058 aa10.95□□□□□ -0.66
GRIN2C-205ENST00000584496 HERC2O95714 4834 aa10.92□□□□□ -0.66
GRIN2C-205ENST00000584496 P0C880 135 aa10.91□□□□□ -0.66
GRIN2C-205ENST00000584496 CSAG1Q6PB30 78 aa10.9□□□□□ -0.66
GRIN2C-205ENST00000584496 K7ERS5 55 aa10.85□□□□□ -0.67
GRIN2C-205ENST00000584496 A0A0D9SG42 100 aa10.77□□□□□ -0.69
GRIN2C-205ENST00000584496 LINC01554Q52M75 96 aa10.74□□□□□ -0.69
GRIN2C-205ENST00000584496 SEC61BP60468 96 aaKnown RBP10.71□□□□□ -0.69
GRIN2C-205ENST00000584496 MUC17Q685J3 4493 aa10.69□□□□□ -0.7
GRIN2C-205ENST00000584496 KRTAP25-1Q3LHN0 102 aa10.67□□□□□ -0.7
GRIN2C-205ENST00000584496 ROMO1P60602 79 aa10.63□□□□□ -0.71
GRIN2C-205ENST00000584496 KRTAP4-1Q9BYQ7 146 aa10.63□□□□□ -0.71
GRIN2C-205ENST00000584496 PCLOQ9Y6V0 5065 aa10.62□□□□□ -0.71
GRIN2C-205ENST00000584496 KRTAP12-2P59991 146 aa10.58□□□□□ -0.72
GRIN2C-205ENST00000584496 M0QZ58 72 aa10.57□□□□□ -0.72
GRIN2C-205ENST00000584496 KRTAP12-1P59990 96 aa10.54□□□□□ -0.72
GRIN2C-205ENST00000584496 CRIPTQ9P021 101 aa10.51□□□□□ -0.73
GRIN2C-205ENST00000584496 KRTAP19-2Q3LHN2 52 aa10.49□□□□□ -0.73
GRIN2C-205ENST00000584496 SPINT4Q6UDR6 99 aa10.42□□□□□ -0.74
GRIN2C-205ENST00000584496 HERC1Q15751 4861 aa10.33□□□□□ -0.76
GRIN2C-205ENST00000584496 LORP23490 312 aaPredicted RBP10.3□□□□□ -0.76
GRIN2C-205ENST00000584496 R4GN34 69 aa10.3□□□□□ -0.76
GRIN2C-205ENST00000584496 C10orf95Q9H7T3 257 aa10.23□□□□□ -0.77
GRIN2C-205ENST00000584496 HMCN2Q8NDA2 5059 aa10.21□□□□□ -0.77
GRIN2C-205ENST00000584496 FLGP20930 4061 aaPredicted RBP10.09□□□□□ -0.79
GRIN2C-205ENST00000584496 MUC2Q02817 5179 aa10.05□□□□□ -0.8
GRIN2C-205ENST00000584496 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
GRIN2C-205ENST00000584496 UBR4Q5T4S7 5183 aa9.82□□□□□ -0.84
GRIN2C-205ENST00000584496 CAMK2N1Q7Z7J9 78 aa9.73□□□□□ -0.85
GRIN2C-205ENST00000584496 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
GRIN2C-205ENST00000584496 KRTAP15-1Q3LI76 137 aa9.7□□□□□ -0.86
GRIN2C-205ENST00000584496 H3BS24 57 aa9.67□□□□□ -0.86
GRIN2C-205ENST00000584496 FAT4Q6V0I7 4981 aa9.63□□□□□ -0.87
GRIN2C-205ENST00000584496 MT1HP80294 61 aa9.61□□□□□ -0.87
GRIN2C-205ENST00000584496 SPRR2GQ9BYE4 73 aa9.58□□□□□ -0.88
GRIN2C-205ENST00000584496 KRTAP19-1Q8IUB9 90 aa9.54□□□□□ -0.88
GRIN2C-205ENST00000584496 M0R2T5 61 aa9.52□□□□□ -0.89
GRIN2C-205ENST00000584496 PP632Q6XCG6 107 aa9.51□□□□□ -0.89
GRIN2C-205ENST00000584496 MT2AP02795 61 aa9.43□□□□□ -0.9
GRIN2C-205ENST00000584496 MT1FP04733 61 aa9.41□□□□□ -0.9
GRIN2C-205ENST00000584496 TNP1P09430 55 aa9.39□□□□□ -0.91
GRIN2C-205ENST00000584496 KRTAP9-8Q9BYQ0 159 aa9.39□□□□□ -0.91
GRIN2C-205ENST00000584496 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
GRIN2C-205ENST00000584496 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
GRIN2C-205ENST00000584496 KRTAP23-1A1A580 65 aa9.31□□□□□ -0.92
GRIN2C-205ENST00000584496 NDUFAF8A1L188 74 aa9.27□□□□□ -0.93
GRIN2C-205ENST00000584496 KRTAP19-8Q3LI54 63 aa9.21□□□□□ -0.93
GRIN2C-205ENST00000584496 MT1BP07438 61 aa9.08□□□□□ -0.96
GRIN2C-205ENST00000584496 KRTAP9-3Q9BYQ3 159 aa9.01□□□□□ -0.97
GRIN2C-205ENST00000584496 LCE2AQ5TA79 106 aaPredicted RBP9.01□□□□□ -0.97
GRIN2C-205ENST00000584496 KRTAP10-5P60370 271 aa8.97□□□□□ -0.97
GRIN2C-205ENST00000584496 MT1XP80297 61 aa8.96□□□□□ -0.98
GRIN2C-205ENST00000584496 LCE3AQ5TA76 89 aa8.95□□□□□ -0.98
GRIN2C-205ENST00000584496 SPRR5A0A1B0GTR4 108 aa8.86□□□□□ -0.99
GRIN2C-205ENST00000584496 LUZP6Q538Z0 58 aa8.79□□□□□ -1
GRIN2C-205ENST00000584496 KRTAP8-1Q8IUC2 63 aa8.77□□□□□ -1
GRIN2C-205ENST00000584496 KRTAP10-12P60413 245 aa8.67□□□□□ -1.02
GRIN2C-205ENST00000584496 LCE2BO14633 110 aa8.66□□□□□ -1.02
GRIN2C-205ENST00000584496 KRTAP10-7P60409 375 aaPredicted RBP8.66□□□□□ -1.02
GRIN2C-205ENST00000584496 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
GRIN2C-205ENST00000584496 KRTAP12-3P60328 96 aa8.53□□□□□ -1.04
GRIN2C-205ENST00000584496 A0A0A0MQY5 61 aa8.31□□□□□ -1.08
GRIN2C-205ENST00000584496 USH2AO75445 5202 aa8.29□□□□□ -1.08
GRIN2C-205ENST00000584496 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
GRIN2C-205ENST00000584496 KRTAP4-8A0A0G2JLE6 195 aa8.15□□□□□ -1.11
GRIN2C-205ENST00000584496 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.11
GRIN2C-205ENST00000584496 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
GRIN2C-205ENST00000584496 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
GRIN2C-205ENST00000584496 KMT2DO14686 5537 aa8.05□□□□□ -1.12
GRIN2C-205ENST00000584496 LCE3CQ5T5A8 94 aa8.04□□□□□ -1.12
GRIN2C-205ENST00000584496 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
GRIN2C-205ENST00000584496 KRTAP19-7Q3SYF9 63 aa7.99□□□□□ -1.13
GRIN2C-205ENST00000584496 SSPOA2VEC9 5147 aa7.99□□□□□ -1.13
GRIN2C-205ENST00000584496 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
GRIN2C-205ENST00000584496 MT1EP04732 61 aa7.77□□□□□ -1.17
GRIN2C-205ENST00000584496 KRTAP9-6A8MVA2 160 aa7.75□□□□□ -1.17
GRIN2C-205ENST00000584496 MT1LQ93083 61 aa7.73□□□□□ -1.17
GRIN2C-205ENST00000584496 KRTAP19-4Q3LI73 84 aa7.73□□□□□ -1.17
GRIN2C-205ENST00000584496 KRTAP4-7Q9BYR0 210 aa7.7□□□□□ -1.18
GRIN2C-205ENST00000584496 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms