RNA–Protein interactions for RNA: ENST00000584010.5

DDX42-217, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 3,929 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-217ENST00000584010 MRPL34Q9BQ48 92 aaKnown RBP4.03□□□□□ -1.76
DDX42-217ENST00000584010 MYCBP2O75592 4640 aa4.03□□□□□ -1.76
DDX42-217ENST00000584010 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
DDX42-217ENST00000584010 Q96NJ1 140 aa4.01□□□□□ -1.77
DDX42-217ENST00000584010 Q5W150 140 aa4□□□□□ -1.77
DDX42-217ENST00000584010 LINC00304Q8N9R0 145 aa4□□□□□ -1.77
DDX42-217ENST00000584010 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
DDX42-217ENST00000584010 PKHD1L1Q86WI1 4243 aa3.94□□□□□ -1.78
DDX42-217ENST00000584010 KRTAP13-3Q3SY46 172 aa3.94□□□□□ -1.78
DDX42-217ENST00000584010 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.78
DDX42-217ENST00000584010 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
DDX42-217ENST00000584010 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
DDX42-217ENST00000584010 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
DDX42-217ENST00000584010 VPS13BQ7Z7G8 4022 aa3.89□□□□□ -1.79
DDX42-217ENST00000584010 Q6ZSA8 131 aa3.88□□□□□ -1.79
DDX42-217ENST00000584010 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
DDX42-217ENST00000584010 A0A1B0GU33 70 aa3.87□□□□□ -1.79
DDX42-217ENST00000584010 TYMSOSQ8TAI1 123 aa3.87□□□□□ -1.79
DDX42-217ENST00000584010 TNXBP22105 4242 aa3.86□□□□□ -1.79
DDX42-217ENST00000584010 KRTAP13-2Q52LG2 175 aa3.86□□□□□ -1.79
DDX42-217ENST00000584010 H0YAA0 97 aa3.85□□□□□ -1.79
DDX42-217ENST00000584010 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
DDX42-217ENST00000584010 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
DDX42-217ENST00000584010 SPINK1P00995 79 aa3.83□□□□□ -1.8
DDX42-217ENST00000584010 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
DDX42-217ENST00000584010 LRP2P98164 4655 aa3.81□□□□□ -1.8
DDX42-217ENST00000584010 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
DDX42-217ENST00000584010 KRTAP10-4P60372 401 aaPredicted RBP3.8□□□□□ -1.8
DDX42-217ENST00000584010 FAT3Q8TDW7 4589 aa3.79□□□□□ -1.8
DDX42-217ENST00000584010 MT1HL1P0DM35 61 aa3.78□□□□□ -1.8
DDX42-217ENST00000584010 KRTAP1-4P0C5Y4 121 aa3.78□□□□□ -1.8
DDX42-217ENST00000584010 C9orf92A6NGG3 77 aa3.77□□□□□ -1.81
DDX42-217ENST00000584010 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
DDX42-217ENST00000584010 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
DDX42-217ENST00000584010 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
DDX42-217ENST00000584010 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
DDX42-217ENST00000584010 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
DDX42-217ENST00000584010 RPS29P62273 56 aaKnown RBP3.66□□□□□ -1.82
DDX42-217ENST00000584010 LCE2BO14633 110 aa3.65□□□□□ -1.82
DDX42-217ENST00000584010 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
DDX42-217ENST00000584010 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
DDX42-217ENST00000584010 MUC2Q02817 5179 aa3.6□□□□□ -1.83
DDX42-217ENST00000584010 FSIP2Q5CZC0 6907 aa3.59□□□□□ -1.83
DDX42-217ENST00000584010 LPAP08519 4548 aa3.59□□□□□ -1.83
DDX42-217ENST00000584010 A0A0D9SG42 100 aa3.57□□□□□ -1.84
DDX42-217ENST00000584010 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
DDX42-217ENST00000584010 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
DDX42-217ENST00000584010 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
DDX42-217ENST00000584010 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
DDX42-217ENST00000584010 S4R3F8 94 aa3.52□□□□□ -1.85
DDX42-217ENST00000584010 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
DDX42-217ENST00000584010 XP32Q5T750 250 aa3.49□□□□□ -1.85
DDX42-217ENST00000584010 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
DDX42-217ENST00000584010 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
DDX42-217ENST00000584010 M0R2T5 61 aa3.4□□□□□ -1.86
DDX42-217ENST00000584010 R4GN34 69 aa3.4□□□□□ -1.86
DDX42-217ENST00000584010 KRTAP13-4Q3LI77 160 aa3.39□□□□□ -1.87
DDX42-217ENST00000584010 LCE2CQ5TA81 110 aa3.39□□□□□ -1.87
DDX42-217ENST00000584010 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
DDX42-217ENST00000584010 INE1O15225 51 aa3.38□□□□□ -1.87
DDX42-217ENST00000584010 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
DDX42-217ENST00000584010 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
DDX42-217ENST00000584010 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
DDX42-217ENST00000584010 M0QZ58 72 aa3.32□□□□□ -1.88
DDX42-217ENST00000584010 KRTAP4-1Q9BYQ7 146 aa3.32□□□□□ -1.88
DDX42-217ENST00000584010 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
DDX42-217ENST00000584010 LORP23490 312 aaPredicted RBP3.28□□□□□ -1.88
DDX42-217ENST00000584010 MT1HP80294 61 aa3.25□□□□□ -1.89
DDX42-217ENST00000584010 KRTAP9-7A8MTY7 169 aa3.19□□□□□ -1.9
DDX42-217ENST00000584010 MUC17Q685J3 4493 aa3.19□□□□□ -1.9
DDX42-217ENST00000584010 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
DDX42-217ENST00000584010 KRTAP19-2Q3LHN2 52 aa3.15□□□□□ -1.91
DDX42-217ENST00000584010 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.14□□□□□ -1.91
DDX42-217ENST00000584010 USH2AO75445 5202 aa3.1□□□□□ -1.91
DDX42-217ENST00000584010 KRTAP10-10P60014 251 aa3.09□□□□□ -1.92
DDX42-217ENST00000584010 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
DDX42-217ENST00000584010 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
DDX42-217ENST00000584010 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
DDX42-217ENST00000584010 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
DDX42-217ENST00000584010 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
DDX42-217ENST00000584010 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
DDX42-217ENST00000584010 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
DDX42-217ENST00000584010 KRTAP9-8Q9BYQ0 159 aa3.01□□□□□ -1.93
DDX42-217ENST00000584010 TNP1P09430 55 aa3□□□□□ -1.93
DDX42-217ENST00000584010 MT2AP02795 61 aa2.99□□□□□ -1.93
DDX42-217ENST00000584010 MT1FP04733 61 aa2.97□□□□□ -1.93
DDX42-217ENST00000584010 KRTAP9-3Q9BYQ3 159 aa2.92□□□□□ -1.94
DDX42-217ENST00000584010 LCE3BQ5TA77 95 aa2.89□□□□□ -1.95
DDX42-217ENST00000584010 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
DDX42-217ENST00000584010 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
DDX42-217ENST00000584010 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
DDX42-217ENST00000584010 NEBP20929 6669 aa2.81□□□□□ -1.96
DDX42-217ENST00000584010 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
DDX42-217ENST00000584010 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
DDX42-217ENST00000584010 KMT2DO14686 5537 aa2.79□□□□□ -1.96
DDX42-217ENST00000584010 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
DDX42-217ENST00000584010 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
DDX42-217ENST00000584010 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
DDX42-217ENST00000584010 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
DDX42-217ENST00000584010 KRTAP10-12P60413 245 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms