RNA–Protein interactions for RNA: ENST00000583962.1

CCDC144NL-AS1-218, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 3,352 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-218ENST00000583962 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
CCDC144NL-AS1-218ENST00000583962 Q5VSD8 79 aa5.85□□□□□ -1.47
CCDC144NL-AS1-218ENST00000583962 DNAH2Q9P225 4427 aa5.85□□□□□ -1.47
CCDC144NL-AS1-218ENST00000583962 PKHD1P08F94 4074 aa5.85□□□□□ -1.47
CCDC144NL-AS1-218ENST00000583962 S4R3F8 94 aa5.84□□□□□ -1.47
CCDC144NL-AS1-218ENST00000583962 SPACA4Q8TDM5 124 aa5.84□□□□□ -1.47
CCDC144NL-AS1-218ENST00000583962 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 HERC2O95714 4834 aa5.83□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 HECTD4Q9Y4D8 3996 aa5.82□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 DYNC1H1Q14204 4646 aaKnown RBP5.81□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 DNAH8Q96JB1 4490 aa5.8□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 R4GN34 69 aa5.79□□□□□ -1.48
CCDC144NL-AS1-218ENST00000583962 PKD1P98161 4303 aa5.77□□□□□ -1.49
CCDC144NL-AS1-218ENST00000583962 LRP1BQ9NZR2 4599 aa5.76□□□□□ -1.49
CCDC144NL-AS1-218ENST00000583962 RYR1P21817 5038 aa5.76□□□□□ -1.49
CCDC144NL-AS1-218ENST00000583962 DNAH5Q8TE73 4624 aa5.75□□□□□ -1.49
CCDC144NL-AS1-218ENST00000583962 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
CCDC144NL-AS1-218ENST00000583962 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
CCDC144NL-AS1-218ENST00000583962 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
CCDC144NL-AS1-218ENST00000583962 VPS13BQ7Z7G8 4022 aa5.69□□□□□ -1.5
CCDC144NL-AS1-218ENST00000583962 HSPG2P98160 4391 aa5.68□□□□□ -1.5
CCDC144NL-AS1-218ENST00000583962 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
CCDC144NL-AS1-218ENST00000583962 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
CCDC144NL-AS1-218ENST00000583962 XP32Q5T750 250 aa5.66□□□□□ -1.5
CCDC144NL-AS1-218ENST00000583962 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
CCDC144NL-AS1-218ENST00000583962 ABCA13Q86UQ4 5058 aa5.63□□□□□ -1.51
CCDC144NL-AS1-218ENST00000583962 FAT1Q14517 4588 aa5.62□□□□□ -1.51
CCDC144NL-AS1-218ENST00000583962 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
CCDC144NL-AS1-218ENST00000583962 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
CCDC144NL-AS1-218ENST00000583962 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
CCDC144NL-AS1-218ENST00000583962 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
CCDC144NL-AS1-218ENST00000583962 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
CCDC144NL-AS1-218ENST00000583962 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
CCDC144NL-AS1-218ENST00000583962 FAT3Q8TDW7 4589 aa5.49□□□□□ -1.53
CCDC144NL-AS1-218ENST00000583962 MYCBP2O75592 4640 aa5.46□□□□□ -1.54
CCDC144NL-AS1-218ENST00000583962 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
CCDC144NL-AS1-218ENST00000583962 TNXBP22105 4242 aa5.4□□□□□ -1.54
CCDC144NL-AS1-218ENST00000583962 HERC1Q15751 4861 aa5.4□□□□□ -1.54
CCDC144NL-AS1-218ENST00000583962 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
CCDC144NL-AS1-218ENST00000583962 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
CCDC144NL-AS1-218ENST00000583962 KRTAP1-4P0C5Y4 121 aa5.34□□□□□ -1.55
CCDC144NL-AS1-218ENST00000583962 INE1O15225 51 aa5.31□□□□□ -1.56
CCDC144NL-AS1-218ENST00000583962 M0QZ58 72 aa5.27□□□□□ -1.57
CCDC144NL-AS1-218ENST00000583962 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
CCDC144NL-AS1-218ENST00000583962 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
CCDC144NL-AS1-218ENST00000583962 HMCN2Q8NDA2 5059 aa5.2□□□□□ -1.58
CCDC144NL-AS1-218ENST00000583962 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
CCDC144NL-AS1-218ENST00000583962 LRP2P98164 4655 aa5.12□□□□□ -1.59
CCDC144NL-AS1-218ENST00000583962 UBR4Q5T4S7 5183 aa5.1□□□□□ -1.59
CCDC144NL-AS1-218ENST00000583962 RPS29P62273 56 aaKnown RBP5.07□□□□□ -1.6
CCDC144NL-AS1-218ENST00000583962 RNF213Q63HN8 5207 aa4.96□□□□□ -1.61
CCDC144NL-AS1-218ENST00000583962 LPAP08519 4548 aa4.96□□□□□ -1.62
CCDC144NL-AS1-218ENST00000583962 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
CCDC144NL-AS1-218ENST00000583962 TNP1P09430 55 aa4.88□□□□□ -1.63
CCDC144NL-AS1-218ENST00000583962 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
CCDC144NL-AS1-218ENST00000583962 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
CCDC144NL-AS1-218ENST00000583962 MUC2Q02817 5179 aa4.77□□□□□ -1.65
CCDC144NL-AS1-218ENST00000583962 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
CCDC144NL-AS1-218ENST00000583962 M0R2T5 61 aa4.73□□□□□ -1.65
CCDC144NL-AS1-218ENST00000583962 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
CCDC144NL-AS1-218ENST00000583962 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
CCDC144NL-AS1-218ENST00000583962 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
CCDC144NL-AS1-218ENST00000583962 MT1HP80294 61 aa4.64□□□□□ -1.67
CCDC144NL-AS1-218ENST00000583962 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
CCDC144NL-AS1-218ENST00000583962 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
CCDC144NL-AS1-218ENST00000583962 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
CCDC144NL-AS1-218ENST00000583962 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
CCDC144NL-AS1-218ENST00000583962 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
CCDC144NL-AS1-218ENST00000583962 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
CCDC144NL-AS1-218ENST00000583962 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
CCDC144NL-AS1-218ENST00000583962 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
CCDC144NL-AS1-218ENST00000583962 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
CCDC144NL-AS1-218ENST00000583962 MT2AP02795 61 aa4.34□□□□□ -1.71
CCDC144NL-AS1-218ENST00000583962 MT1FP04733 61 aa4.3□□□□□ -1.72
CCDC144NL-AS1-218ENST00000583962 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
CCDC144NL-AS1-218ENST00000583962 LCE2BO14633 110 aa4.2□□□□□ -1.74
CCDC144NL-AS1-218ENST00000583962 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
CCDC144NL-AS1-218ENST00000583962 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.74
CCDC144NL-AS1-218ENST00000583962 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
CCDC144NL-AS1-218ENST00000583962 USH2AO75445 5202 aa4.14□□□□□ -1.75
CCDC144NL-AS1-218ENST00000583962 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
CCDC144NL-AS1-218ENST00000583962 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
CCDC144NL-AS1-218ENST00000583962 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
CCDC144NL-AS1-218ENST00000583962 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
CCDC144NL-AS1-218ENST00000583962 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
CCDC144NL-AS1-218ENST00000583962 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
CCDC144NL-AS1-218ENST00000583962 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
CCDC144NL-AS1-218ENST00000583962 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
CCDC144NL-AS1-218ENST00000583962 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
CCDC144NL-AS1-218ENST00000583962 MT1BP07438 61 aa3.94□□□□□ -1.78
CCDC144NL-AS1-218ENST00000583962 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
CCDC144NL-AS1-218ENST00000583962 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
CCDC144NL-AS1-218ENST00000583962 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms