RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 ACYP2P14621 99 aa6.59□□□□□ -1.35
ITGB4-209ENST00000583327 M0R2T5 61 aa6.55□□□□□ -1.36
ITGB4-209ENST00000583327 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
ITGB4-209ENST00000583327 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
ITGB4-209ENST00000583327 PCP4P48539 62 aa6.54□□□□□ -1.36
ITGB4-209ENST00000583327 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
ITGB4-209ENST00000583327 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
ITGB4-209ENST00000583327 TMEM258P61165 79 aa6.48□□□□□ -1.37
ITGB4-209ENST00000583327 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
ITGB4-209ENST00000583327 COA5Q86WW8 74 aa6.44□□□□□ -1.38
ITGB4-209ENST00000583327 MT2AP02795 61 aa6.42□□□□□ -1.38
ITGB4-209ENST00000583327 H0YAA0 97 aa6.4□□□□□ -1.38
ITGB4-209ENST00000583327 CHKB-CPT1BH3BT56 60 aa6.39□□□□□ -1.39
ITGB4-209ENST00000583327 SPTSSBQ8NFR3 76 aa6.38□□□□□ -1.39
ITGB4-209ENST00000583327 MT1FP04733 61 aa6.37□□□□□ -1.39
ITGB4-209ENST00000583327 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
ITGB4-209ENST00000583327 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
ITGB4-209ENST00000583327 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
ITGB4-209ENST00000583327 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
ITGB4-209ENST00000583327 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
ITGB4-209ENST00000583327 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
ITGB4-209ENST00000583327 P0C880 135 aa6.23□□□□□ -1.41
ITGB4-209ENST00000583327 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
ITGB4-209ENST00000583327 CRIPTQ9P021 101 aa6.2□□□□□ -1.42
ITGB4-209ENST00000583327 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
ITGB4-209ENST00000583327 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
ITGB4-209ENST00000583327 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
ITGB4-209ENST00000583327 LCE2BO14633 110 aa6.14□□□□□ -1.43
ITGB4-209ENST00000583327 SEC61GP60059 68 aa6.1□□□□□ -1.43
ITGB4-209ENST00000583327 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
ITGB4-209ENST00000583327 SMIM26A0A096LP01 95 aa6.09□□□□□ -1.43
ITGB4-209ENST00000583327 A0A1B0GU69 56 aa6.08□□□□□ -1.44
ITGB4-209ENST00000583327 Q1T7F1 81 aa6.07□□□□□ -1.44
ITGB4-209ENST00000583327 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
ITGB4-209ENST00000583327 M0QZ58 72 aa6.05□□□□□ -1.44
ITGB4-209ENST00000583327 R4GN34 69 aa6.05□□□□□ -1.44
ITGB4-209ENST00000583327 V9GYY9 64 aa6.03□□□□□ -1.44
ITGB4-209ENST00000583327 A0A1B0GU33 70 aa6.02□□□□□ -1.45
ITGB4-209ENST00000583327 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
ITGB4-209ENST00000583327 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
ITGB4-209ENST00000583327 MT1BP07438 61 aa6□□□□□ -1.45
ITGB4-209ENST00000583327 Q5VV11 94 aa6□□□□□ -1.45
ITGB4-209ENST00000583327 USH2AO75445 5202 aa5.99□□□□□ -1.45
ITGB4-209ENST00000583327 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
ITGB4-209ENST00000583327 A6NN06 94 aa5.9□□□□□ -1.46
ITGB4-209ENST00000583327 PSPHP1O15172 72 aa5.9□□□□□ -1.46
ITGB4-209ENST00000583327 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
ITGB4-209ENST00000583327 UQCR11O14957 56 aa5.86□□□□□ -1.47
ITGB4-209ENST00000583327 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
ITGB4-209ENST00000583327 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
ITGB4-209ENST00000583327 FSIP2Q5CZC0 6907 aa5.84□□□□□ -1.47
ITGB4-209ENST00000583327 SSPOA2VEC9 5147 aa5.84□□□□□ -1.48
ITGB4-209ENST00000583327 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
ITGB4-209ENST00000583327 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
ITGB4-209ENST00000583327 A8MU10 97 aa5.79□□□□□ -1.48
ITGB4-209ENST00000583327 A0A0D9SG42 100 aa5.78□□□□□ -1.48
ITGB4-209ENST00000583327 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
ITGB4-209ENST00000583327 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
ITGB4-209ENST00000583327 KRTAP10-5P60370 271 aa5.75□□□□□ -1.49
ITGB4-209ENST00000583327 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
ITGB4-209ENST00000583327 MT1XP80297 61 aa5.73□□□□□ -1.49
ITGB4-209ENST00000583327 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
ITGB4-209ENST00000583327 A6NED7 52 aa5.7□□□□□ -1.5
ITGB4-209ENST00000583327 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
ITGB4-209ENST00000583327 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.5
ITGB4-209ENST00000583327 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
ITGB4-209ENST00000583327 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
ITGB4-209ENST00000583327 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
ITGB4-209ENST00000583327 K7ERS5 55 aa5.51□□□□□ -1.53
ITGB4-209ENST00000583327 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
ITGB4-209ENST00000583327 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
ITGB4-209ENST00000583327 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
ITGB4-209ENST00000583327 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
ITGB4-209ENST00000583327 BRK1Q8WUW1 75 aa5.41□□□□□ -1.54
ITGB4-209ENST00000583327 MACF1Q9UPN3 7388 aaKnown RBP5.37□□□□□ -1.55
ITGB4-209ENST00000583327 TNP1P09430 55 aa5.33□□□□□ -1.56
ITGB4-209ENST00000583327 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
ITGB4-209ENST00000583327 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
ITGB4-209ENST00000583327 ROMO1P60602 79 aa5.28□□□□□ -1.56
ITGB4-209ENST00000583327 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
ITGB4-209ENST00000583327 KMT2DO14686 5537 aa5.26□□□□□ -1.57
ITGB4-209ENST00000583327 KRTAP6-3Q3LI67 103 aa5.24□□□□□ -1.57
ITGB4-209ENST00000583327 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
ITGB4-209ENST00000583327 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
ITGB4-209ENST00000583327 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
ITGB4-209ENST00000583327 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
ITGB4-209ENST00000583327 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
ITGB4-209ENST00000583327 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
ITGB4-209ENST00000583327 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
ITGB4-209ENST00000583327 PMAIP1Q13794 54 aa5.14□□□□□ -1.59
ITGB4-209ENST00000583327 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
ITGB4-209ENST00000583327 SPRR2FQ96RM1 72 aa5.08□□□□□ -1.6
ITGB4-209ENST00000583327 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
ITGB4-209ENST00000583327 MT1EP04732 61 aa5.03□□□□□ -1.6
ITGB4-209ENST00000583327 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
ITGB4-209ENST00000583327 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
ITGB4-209ENST00000583327 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
ITGB4-209ENST00000583327 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
ITGB4-209ENST00000583327 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
ITGB4-209ENST00000583327 SPRR2EP22531 72 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms