RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 A6NN06 94 aa5.97□□□□□ -1.45
GGA3-213ENST00000582486 LRP2P98164 4655 aa5.95□□□□□ -1.46
GGA3-213ENST00000582486 RPL37P61927 97 aaKnown RBP5.95□□□□□ -1.46
GGA3-213ENST00000582486 SPINK7P58062 85 aa5.93□□□□□ -1.46
GGA3-213ENST00000582486 TPRXLQ17RH7 258 aa5.92□□□□□ -1.46
GGA3-213ENST00000582486 DMAC1Q96GE9 116 aa5.92□□□□□ -1.46
GGA3-213ENST00000582486 ACYP2P14621 99 aa5.91□□□□□ -1.46
GGA3-213ENST00000582486 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.46
GGA3-213ENST00000582486 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
GGA3-213ENST00000582486 HERC1Q15751 4861 aa5.83□□□□□ -1.48
GGA3-213ENST00000582486 KRTAP3-1Q9BYR8 98 aa5.82□□□□□ -1.48
GGA3-213ENST00000582486 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
GGA3-213ENST00000582486 A0A1B0GU69 56 aa5.76□□□□□ -1.49
GGA3-213ENST00000582486 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
GGA3-213ENST00000582486 HMCN2Q8NDA2 5059 aa5.73□□□□□ -1.49
GGA3-213ENST00000582486 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
GGA3-213ENST00000582486 UQCR11O14957 56 aa5.7□□□□□ -1.5
GGA3-213ENST00000582486 MIR22HGQ0VDD5 57 aa5.69□□□□□ -1.5
GGA3-213ENST00000582486 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
GGA3-213ENST00000582486 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
GGA3-213ENST00000582486 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.51
GGA3-213ENST00000582486 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
GGA3-213ENST00000582486 MUC2Q02817 5179 aa5.63□□□□□ -1.51
GGA3-213ENST00000582486 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
GGA3-213ENST00000582486 KRTAP3-3Q9BYR6 98 aa5.6□□□□□ -1.51
GGA3-213ENST00000582486 S4R3F8 94 aa5.59□□□□□ -1.51
GGA3-213ENST00000582486 CSAG1Q6PB30 78 aa5.49□□□□□ -1.53
GGA3-213ENST00000582486 KRTAP19-2Q3LHN2 52 aa5.48□□□□□ -1.53
GGA3-213ENST00000582486 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
GGA3-213ENST00000582486 H0YAA0 97 aa5.47□□□□□ -1.53
GGA3-213ENST00000582486 FLGP20930 4061 aaPredicted RBP5.44□□□□□ -1.54
GGA3-213ENST00000582486 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
GGA3-213ENST00000582486 KRTAP10-6P60371 365 aaPredicted RBP5.42□□□□□ -1.54
GGA3-213ENST00000582486 A0A1B0GU33 70 aa5.42□□□□□ -1.54
GGA3-213ENST00000582486 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
GGA3-213ENST00000582486 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
GGA3-213ENST00000582486 P0C880 135 aa5.38□□□□□ -1.55
GGA3-213ENST00000582486 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
GGA3-213ENST00000582486 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
GGA3-213ENST00000582486 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
GGA3-213ENST00000582486 K7ERS5 55 aa5.28□□□□□ -1.56
GGA3-213ENST00000582486 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
GGA3-213ENST00000582486 ROMO1P60602 79 aa5.26□□□□□ -1.57
GGA3-213ENST00000582486 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
GGA3-213ENST00000582486 A0A0D9SG42 100 aa5.22□□□□□ -1.57
GGA3-213ENST00000582486 LORP23490 312 aaPredicted RBP5.2□□□□□ -1.58
GGA3-213ENST00000582486 MT1HP80294 61 aa5.2□□□□□ -1.58
GGA3-213ENST00000582486 M0QZ58 72 aa5.2□□□□□ -1.58
GGA3-213ENST00000582486 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
GGA3-213ENST00000582486 M0R2T5 61 aa5.17□□□□□ -1.58
GGA3-213ENST00000582486 R4GN34 69 aa5.17□□□□□ -1.58
GGA3-213ENST00000582486 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
GGA3-213ENST00000582486 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
GGA3-213ENST00000582486 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
GGA3-213ENST00000582486 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
GGA3-213ENST00000582486 MT2AP02795 61 aa5.01□□□□□ -1.61
GGA3-213ENST00000582486 CAMK2N1Q7Z7J9 78 aa5.01□□□□□ -1.61
GGA3-213ENST00000582486 MT1FP04733 61 aa5□□□□□ -1.61
GGA3-213ENST00000582486 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
GGA3-213ENST00000582486 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
GGA3-213ENST00000582486 NDUFAF8A1L188 74 aa4.96□□□□□ -1.62
GGA3-213ENST00000582486 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
GGA3-213ENST00000582486 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
GGA3-213ENST00000582486 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
GGA3-213ENST00000582486 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
GGA3-213ENST00000582486 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
GGA3-213ENST00000582486 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.64
GGA3-213ENST00000582486 PLAC4Q8WY50 150 aa4.81□□□□□ -1.64
GGA3-213ENST00000582486 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
GGA3-213ENST00000582486 MT1BP07438 61 aa4.75□□□□□ -1.65
GGA3-213ENST00000582486 LCE2BO14633 110 aa4.7□□□□□ -1.66
GGA3-213ENST00000582486 USH2AO75445 5202 aa4.67□□□□□ -1.66
GGA3-213ENST00000582486 TNP1P09430 55 aa4.62□□□□□ -1.67
GGA3-213ENST00000582486 MT1XP80297 61 aa4.62□□□□□ -1.67
GGA3-213ENST00000582486 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
GGA3-213ENST00000582486 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
GGA3-213ENST00000582486 PRO2289Q9P1D8 64 aa4.52□□□□□ -1.69
GGA3-213ENST00000582486 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
GGA3-213ENST00000582486 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
GGA3-213ENST00000582486 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
GGA3-213ENST00000582486 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
GGA3-213ENST00000582486 KRTAP10-12P60413 245 aa4.4□□□□□ -1.7
GGA3-213ENST00000582486 KMT2DO14686 5537 aa4.39□□□□□ -1.71
GGA3-213ENST00000582486 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
GGA3-213ENST00000582486 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
GGA3-213ENST00000582486 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
GGA3-213ENST00000582486 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
GGA3-213ENST00000582486 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
GGA3-213ENST00000582486 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
GGA3-213ENST00000582486 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
GGA3-213ENST00000582486 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
GGA3-213ENST00000582486 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
GGA3-213ENST00000582486 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
GGA3-213ENST00000582486 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
GGA3-213ENST00000582486 INE1O15225 51 aa4.04□□□□□ -1.76
GGA3-213ENST00000582486 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
GGA3-213ENST00000582486 MT1EP04732 61 aa4.03□□□□□ -1.76
GGA3-213ENST00000582486 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
GGA3-213ENST00000582486 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
GGA3-213ENST00000582486 MT1LQ93083 61 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms