RNA–Protein interactions for RNA: ENST00000582478.5

RFNG-208, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best)

Gene RFNG, Length 3,107 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-208ENST00000582478 KRTAP3-1Q9BYR8 98 aa8.68□□□□□ -1.02
RFNG-208ENST00000582478 DYNC1H1Q14204 4646 aaKnown RBP8.67□□□□□ -1.02
RFNG-208ENST00000582478 KRTAP13-4Q3LI77 160 aa8.64□□□□□ -1.03
RFNG-208ENST00000582478 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
RFNG-208ENST00000582478 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
RFNG-208ENST00000582478 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
RFNG-208ENST00000582478 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.05
RFNG-208ENST00000582478 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
RFNG-208ENST00000582478 RYR3Q15413 4870 aa8.49□□□□□ -1.05
RFNG-208ENST00000582478 RYR2Q92736 4967 aa8.48□□□□□ -1.05
RFNG-208ENST00000582478 S4R3F8 94 aa8.47□□□□□ -1.05
RFNG-208ENST00000582478 KRTAP12-2P59991 146 aa8.44□□□□□ -1.06
RFNG-208ENST00000582478 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
RFNG-208ENST00000582478 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
RFNG-208ENST00000582478 FAT3Q8TDW7 4589 aa8.38□□□□□ -1.07
RFNG-208ENST00000582478 KRTAP21-3Q3LHN1 58 aa8.34□□□□□ -1.08
RFNG-208ENST00000582478 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
RFNG-208ENST00000582478 PLAC4Q8WY50 150 aa8.27□□□□□ -1.08
RFNG-208ENST00000582478 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
RFNG-208ENST00000582478 EPPK1P58107 5090 aaKnown RBP8.25□□□□□ -1.09
RFNG-208ENST00000582478 Q5VSD8 79 aa8.25□□□□□ -1.09
RFNG-208ENST00000582478 KRTAP17-1Q9BYP8 105 aa8.25□□□□□ -1.09
RFNG-208ENST00000582478 XP32Q5T750 250 aa8.23□□□□□ -1.09
RFNG-208ENST00000582478 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
RFNG-208ENST00000582478 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
RFNG-208ENST00000582478 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
RFNG-208ENST00000582478 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
RFNG-208ENST00000582478 HSPG2P98160 4391 aa8.2□□□□□ -1.1
RFNG-208ENST00000582478 RYR1P21817 5038 aa8.18□□□□□ -1.1
RFNG-208ENST00000582478 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
RFNG-208ENST00000582478 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
RFNG-208ENST00000582478 LPAP08519 4548 aa8.07□□□□□ -1.12
RFNG-208ENST00000582478 ABCA13Q86UQ4 5058 aa8.02□□□□□ -1.13
RFNG-208ENST00000582478 LRP2P98164 4655 aa8□□□□□ -1.13
RFNG-208ENST00000582478 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
RFNG-208ENST00000582478 TNXBP22105 4242 aa7.98□□□□□ -1.13
RFNG-208ENST00000582478 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
RFNG-208ENST00000582478 MUC2Q02817 5179 aa7.83□□□□□ -1.16
RFNG-208ENST00000582478 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
RFNG-208ENST00000582478 M0QZ58 72 aa7.77□□□□□ -1.17
RFNG-208ENST00000582478 HERC2O95714 4834 aa7.73□□□□□ -1.17
RFNG-208ENST00000582478 J3QL48 77 aa7.68□□□□□ -1.18
RFNG-208ENST00000582478 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
RFNG-208ENST00000582478 R4GN34 69 aa7.65□□□□□ -1.19
RFNG-208ENST00000582478 HERC1Q15751 4861 aa7.63□□□□□ -1.19
RFNG-208ENST00000582478 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
RFNG-208ENST00000582478 PCLOQ9Y6V0 5065 aa7.5□□□□□ -1.21
RFNG-208ENST00000582478 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
RFNG-208ENST00000582478 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
RFNG-208ENST00000582478 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
RFNG-208ENST00000582478 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
RFNG-208ENST00000582478 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
RFNG-208ENST00000582478 BIRC6Q9NR09 4857 aa7.31□□□□□ -1.24
RFNG-208ENST00000582478 UBR4Q5T4S7 5183 aa7.27□□□□□ -1.25
RFNG-208ENST00000582478 MUC17Q685J3 4493 aa7.21□□□□□ -1.26
RFNG-208ENST00000582478 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.26
RFNG-208ENST00000582478 INE1O15225 51 aa7.11□□□□□ -1.27
RFNG-208ENST00000582478 HMCN2Q8NDA2 5059 aa7.1□□□□□ -1.27
RFNG-208ENST00000582478 TNP1P09430 55 aa7.1□□□□□ -1.27
RFNG-208ENST00000582478 M0R2T5 61 aa6.99□□□□□ -1.29
RFNG-208ENST00000582478 KRTAP19-2Q3LHN2 52 aa6.88□□□□□ -1.31
RFNG-208ENST00000582478 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
RFNG-208ENST00000582478 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
RFNG-208ENST00000582478 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
RFNG-208ENST00000582478 LCE2CQ5TA81 110 aa6.67□□□□□ -1.34
RFNG-208ENST00000582478 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
RFNG-208ENST00000582478 USH2AO75445 5202 aa6.63□□□□□ -1.35
RFNG-208ENST00000582478 MT1HP80294 61 aa6.59□□□□□ -1.35
RFNG-208ENST00000582478 FSIP2Q5CZC0 6907 aa6.58□□□□□ -1.36
RFNG-208ENST00000582478 MT1FP04733 61 aa6.5□□□□□ -1.37
RFNG-208ENST00000582478 MT2AP02795 61 aa6.43□□□□□ -1.38
RFNG-208ENST00000582478 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
RFNG-208ENST00000582478 KMT2DO14686 5537 aa6.35□□□□□ -1.39
RFNG-208ENST00000582478 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
RFNG-208ENST00000582478 KRTAP10-12P60413 245 aa6.28□□□□□ -1.4
RFNG-208ENST00000582478 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
RFNG-208ENST00000582478 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
RFNG-208ENST00000582478 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
RFNG-208ENST00000582478 MT1BP07438 61 aa6.11□□□□□ -1.43
RFNG-208ENST00000582478 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
RFNG-208ENST00000582478 MT1XP80297 61 aa6.03□□□□□ -1.44
RFNG-208ENST00000582478 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
RFNG-208ENST00000582478 KRTAP10-7P60409 375 aaPredicted RBP6.03□□□□□ -1.44
RFNG-208ENST00000582478 LCE2BO14633 110 aa6.01□□□□□ -1.45
RFNG-208ENST00000582478 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
RFNG-208ENST00000582478 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
RFNG-208ENST00000582478 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
RFNG-208ENST00000582478 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
RFNG-208ENST00000582478 LCE3CQ5T5A8 94 aa5.87□□□□□ -1.47
RFNG-208ENST00000582478 LCE2AQ5TA79 106 aaPredicted RBP5.83□□□□□ -1.48
RFNG-208ENST00000582478 SSPOA2VEC9 5147 aa5.8□□□□□ -1.48
RFNG-208ENST00000582478 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
RFNG-208ENST00000582478 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
RFNG-208ENST00000582478 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
RFNG-208ENST00000582478 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
RFNG-208ENST00000582478 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
RFNG-208ENST00000582478 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
RFNG-208ENST00000582478 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
RFNG-208ENST00000582478 FCGBPQ9Y6R7 5405 aaPredicted RBP5.59□□□□□ -1.51
RFNG-208ENST00000582478 KRTAP12-4P60329 112 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms