RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 LINC00643Q86TS7 51 aa4.72□□□□□ -1.65
TOP3A-211ENST00000581536 WFDC13Q8IUB5 93 aa4.72□□□□□ -1.65
TOP3A-211ENST00000581536 KRTAP10-10P60014 251 aa4.71□□□□□ -1.66
TOP3A-211ENST00000581536 MT3P25713 68 aa4.69□□□□□ -1.66
TOP3A-211ENST00000581536 LINC00846Q9NV44 126 aa4.69□□□□□ -1.66
TOP3A-211ENST00000581536 CASC2Q6XLA1 102 aa4.67□□□□□ -1.66
TOP3A-211ENST00000581536 HCG22E2RYF7 251 aa4.66□□□□□ -1.66
TOP3A-211ENST00000581536 FAM236AA0A1B0GUQ0 79 aa4.65□□□□□ -1.67
TOP3A-211ENST00000581536 FAM236BA0A1B0GV22 79 aa4.65□□□□□ -1.67
TOP3A-211ENST00000581536 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
TOP3A-211ENST00000581536 ATP5EP2Q5VTU8 51 aa4.64□□□□□ -1.67
TOP3A-211ENST00000581536 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
TOP3A-211ENST00000581536 ATOX1O00244 68 aa4.63□□□□□ -1.67
TOP3A-211ENST00000581536 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
TOP3A-211ENST00000581536 UQCRQO14949 82 aa4.62□□□□□ -1.67
TOP3A-211ENST00000581536 UBL5Q9BZL1 73 aa4.62□□□□□ -1.67
TOP3A-211ENST00000581536 HIST1H4AP62805 103 aaKnown RBP4.61□□□□□ -1.67
TOP3A-211ENST00000581536 C4orf26Q17RF5 130 aa4.6□□□□□ -1.67
TOP3A-211ENST00000581536 C7orf65Q6ZTY9 151 aa4.6□□□□□ -1.67
TOP3A-211ENST00000581536 COX7CP15954 63 aa4.59□□□□□ -1.67
TOP3A-211ENST00000581536 CXCL6P80162 114 aa4.58□□□□□ -1.68
TOP3A-211ENST00000581536 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
TOP3A-211ENST00000581536 TMEM258P61165 79 aa4.53□□□□□ -1.68
TOP3A-211ENST00000581536 SMIM20Q8N5G0 67 aa4.53□□□□□ -1.68
TOP3A-211ENST00000581536 RPS28P62857 69 aaKnown RBP4.5□□□□□ -1.69
TOP3A-211ENST00000581536 C5orf47Q569G3 176 aa4.5□□□□□ -1.69
TOP3A-211ENST00000581536 C1orf64Q8NEQ6 169 aa4.5□□□□□ -1.69
TOP3A-211ENST00000581536 A0A087WVE0 104 aa4.48□□□□□ -1.69
TOP3A-211ENST00000581536 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
TOP3A-211ENST00000581536 TP53AIP1Q9HCN2 124 aa4.48□□□□□ -1.69
TOP3A-211ENST00000581536 TRAV7A0A075B6U4 112 aa4.47□□□□□ -1.69
TOP3A-211ENST00000581536 LCA10Q71F78 164 aa4.46□□□□□ -1.7
TOP3A-211ENST00000581536 S4R3F8 94 aa4.46□□□□□ -1.7
TOP3A-211ENST00000581536 CYP4F30PQ9H0H9 118 aa4.45□□□□□ -1.7
TOP3A-211ENST00000581536 NDUFC1O43677 76 aa4.43□□□□□ -1.7
TOP3A-211ENST00000581536 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
TOP3A-211ENST00000581536 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
TOP3A-211ENST00000581536 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
TOP3A-211ENST00000581536 CSAG1Q6PB30 78 aa4.42□□□□□ -1.7
TOP3A-211ENST00000581536 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
TOP3A-211ENST00000581536 C20orf197Q8N268 126 aa4.41□□□□□ -1.7
TOP3A-211ENST00000581536 TRAV22A0A0B4J277 110 aa4.39□□□□□ -1.71
TOP3A-211ENST00000581536 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
TOP3A-211ENST00000581536 CYSTM1Q9H1C7 97 aa4.39□□□□□ -1.71
TOP3A-211ENST00000581536 SERP1Q9Y6X1 66 aa4.38□□□□□ -1.71
TOP3A-211ENST00000581536 LOC101927531A0A1B0GV80 90 aa4.36□□□□□ -1.71
TOP3A-211ENST00000581536 H0Y9P7 68 aa4.36□□□□□ -1.71
TOP3A-211ENST00000581536 H7BZZ5 65 aa4.36□□□□□ -1.71
TOP3A-211ENST00000581536 MT1BP07438 61 aa4.36□□□□□ -1.71
TOP3A-211ENST00000581536 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
TOP3A-211ENST00000581536 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
TOP3A-211ENST00000581536 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
TOP3A-211ENST00000581536 LINC00208Q96KT6 92 aa4.31□□□□□ -1.72
TOP3A-211ENST00000581536 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
TOP3A-211ENST00000581536 SNURFQ9Y675 71 aa4.31□□□□□ -1.72
TOP3A-211ENST00000581536 Q5VV11 94 aa4.3□□□□□ -1.72
TOP3A-211ENST00000581536 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
TOP3A-211ENST00000581536 A6NN06 94 aa4.26□□□□□ -1.73
TOP3A-211ENST00000581536 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
TOP3A-211ENST00000581536 MP68P56378 58 aa4.23□□□□□ -1.73
TOP3A-211ENST00000581536 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
TOP3A-211ENST00000581536 ADM2Q7Z4H4 148 aa4.22□□□□□ -1.73
TOP3A-211ENST00000581536 A8MUN3 132 aa4.21□□□□□ -1.74
TOP3A-211ENST00000581536 H3BPC8 53 aa4.21□□□□□ -1.74
TOP3A-211ENST00000581536 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
TOP3A-211ENST00000581536 H0YAA0 97 aa4.2□□□□□ -1.74
TOP3A-211ENST00000581536 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
TOP3A-211ENST00000581536 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
TOP3A-211ENST00000581536 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
TOP3A-211ENST00000581536 V9GYY9 64 aa4.16□□□□□ -1.74
TOP3A-211ENST00000581536 P0C880 135 aa4.15□□□□□ -1.75
TOP3A-211ENST00000581536 SPANXA2-OT1Q8N9U9 137 aa4.15□□□□□ -1.75
TOP3A-211ENST00000581536 KMT2DO14686 5537 aa4.14□□□□□ -1.75
TOP3A-211ENST00000581536 Q1T7F1 81 aa4.14□□□□□ -1.75
TOP3A-211ENST00000581536 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
TOP3A-211ENST00000581536 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
TOP3A-211ENST00000581536 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
TOP3A-211ENST00000581536 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
TOP3A-211ENST00000581536 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
TOP3A-211ENST00000581536 NEBP20929 6669 aa4.1□□□□□ -1.75
TOP3A-211ENST00000581536 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
TOP3A-211ENST00000581536 MT1XP80297 61 aa4.08□□□□□ -1.76
TOP3A-211ENST00000581536 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
TOP3A-211ENST00000581536 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
TOP3A-211ENST00000581536 R4GN34 69 aa4.07□□□□□ -1.76
TOP3A-211ENST00000581536 M0QZ58 72 aa4.06□□□□□ -1.76
TOP3A-211ENST00000581536 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
TOP3A-211ENST00000581536 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
TOP3A-211ENST00000581536 ACYP2P14621 99 aa4.04□□□□□ -1.76
TOP3A-211ENST00000581536 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
TOP3A-211ENST00000581536 PSPHP1O15172 72 aa4.01□□□□□ -1.77
TOP3A-211ENST00000581536 COA5Q86WW8 74 aa4.01□□□□□ -1.77
TOP3A-211ENST00000581536 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
TOP3A-211ENST00000581536 PRR15LQ9BU68 103 aa3.98□□□□□ -1.77
TOP3A-211ENST00000581536 CHKB-CPT1BH3BT56 60 aa3.97□□□□□ -1.77
TOP3A-211ENST00000581536 SPRR2FQ96RM1 72 aa3.95□□□□□ -1.78
TOP3A-211ENST00000581536 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
TOP3A-211ENST00000581536 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
TOP3A-211ENST00000581536 A6NED7 52 aa3.93□□□□□ -1.78
TOP3A-211ENST00000581536 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms