RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 KLKP1Q107X0 134 aa8.49□□□□□ -1.05
TOP2A-205ENST00000581055 SMIM20Q8N5G0 67 aa8.47□□□□□ -1.05
TOP2A-205ENST00000581055 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
TOP2A-205ENST00000581055 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
TOP2A-205ENST00000581055 USH2AO75445 5202 aa8.42□□□□□ -1.06
TOP2A-205ENST00000581055 TRAV7A0A075B6U4 112 aa8.41□□□□□ -1.06
TOP2A-205ENST00000581055 NDUFC1O43677 76 aa8.4□□□□□ -1.06
TOP2A-205ENST00000581055 DMAC1Q96GE9 116 aa8.29□□□□□ -1.08
TOP2A-205ENST00000581055 SSPOA2VEC9 5147 aa8.27□□□□□ -1.08
TOP2A-205ENST00000581055 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
TOP2A-205ENST00000581055 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
TOP2A-205ENST00000581055 H0YAA0 97 aa8.24□□□□□ -1.09
TOP2A-205ENST00000581055 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
TOP2A-205ENST00000581055 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
TOP2A-205ENST00000581055 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
TOP2A-205ENST00000581055 SPRR2GQ9BYE4 73 aa8.18□□□□□ -1.1
TOP2A-205ENST00000581055 SNURFQ9Y675 71 aa8.18□□□□□ -1.1
TOP2A-205ENST00000581055 ACYP2P14621 99 aa8.17□□□□□ -1.1
TOP2A-205ENST00000581055 C20orf197Q8N268 126 aa8.15□□□□□ -1.1
TOP2A-205ENST00000581055 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
TOP2A-205ENST00000581055 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
TOP2A-205ENST00000581055 Q5VV11 94 aa8.1□□□□□ -1.11
TOP2A-205ENST00000581055 FCGBPQ9Y6R7 5405 aaPredicted RBP8.08□□□□□ -1.12
TOP2A-205ENST00000581055 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
TOP2A-205ENST00000581055 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
TOP2A-205ENST00000581055 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
TOP2A-205ENST00000581055 CHKB-CPT1BH3BT56 60 aa8.04□□□□□ -1.12
TOP2A-205ENST00000581055 MT1BP07438 61 aa8.02□□□□□ -1.13
TOP2A-205ENST00000581055 COX7CP15954 63 aa8.02□□□□□ -1.13
TOP2A-205ENST00000581055 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
TOP2A-205ENST00000581055 P0C880 135 aa7.95□□□□□ -1.14
TOP2A-205ENST00000581055 R4GN34 69 aa7.94□□□□□ -1.14
TOP2A-205ENST00000581055 A6NN06 94 aa7.89□□□□□ -1.15
TOP2A-205ENST00000581055 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
TOP2A-205ENST00000581055 M0QZ58 72 aa7.87□□□□□ -1.15
TOP2A-205ENST00000581055 MACF1Q9UPN3 7388 aaKnown RBP7.86□□□□□ -1.15
TOP2A-205ENST00000581055 H7BZZ5 65 aa7.83□□□□□ -1.16
TOP2A-205ENST00000581055 KRTAP9-7A8MTY7 169 aa7.82□□□□□ -1.16
TOP2A-205ENST00000581055 COA5Q86WW8 74 aa7.82□□□□□ -1.16
TOP2A-205ENST00000581055 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
TOP2A-205ENST00000581055 PLAC4Q8WY50 150 aa7.79□□□□□ -1.16
TOP2A-205ENST00000581055 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
TOP2A-205ENST00000581055 SYNE2Q8WXH0 6885 aaKnown RBP7.76□□□□□ -1.17
TOP2A-205ENST00000581055 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
TOP2A-205ENST00000581055 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
TOP2A-205ENST00000581055 CCDC179H3BU77 68 aa7.67□□□□□ -1.18
TOP2A-205ENST00000581055 SEC61GP60059 68 aa7.67□□□□□ -1.18
TOP2A-205ENST00000581055 KRTAP4-8Q9BYQ9 185 aa7.67□□□□□ -1.18
TOP2A-205ENST00000581055 SERP1Q9Y6X1 66 aa7.63□□□□□ -1.19
TOP2A-205ENST00000581055 MT1XP80297 61 aa7.59□□□□□ -1.19
TOP2A-205ENST00000581055 KRTAP6-3Q3LI67 103 aa7.58□□□□□ -1.2
TOP2A-205ENST00000581055 ATP5EP56381 51 aaPredicted RBP7.57□□□□□ -1.2
TOP2A-205ENST00000581055 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
TOP2A-205ENST00000581055 A0A1B0GU33 70 aa7.46□□□□□ -1.22
TOP2A-205ENST00000581055 A0A1B0GU69 56 aa7.45□□□□□ -1.22
TOP2A-205ENST00000581055 KRTAP4-12Q9BQ66 201 aa7.45□□□□□ -1.22
TOP2A-205ENST00000581055 TMEM258P61165 79 aa7.44□□□□□ -1.22
TOP2A-205ENST00000581055 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
TOP2A-205ENST00000581055 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
TOP2A-205ENST00000581055 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
TOP2A-205ENST00000581055 A0A0D9SG42 100 aa7.35□□□□□ -1.23
TOP2A-205ENST00000581055 PRR15LQ9BU68 103 aa7.34□□□□□ -1.23
TOP2A-205ENST00000581055 KRTAP5-9P26371 169 aa7.32□□□□□ -1.24
TOP2A-205ENST00000581055 NEBP20929 6669 aa7.28□□□□□ -1.24
TOP2A-205ENST00000581055 SMIM26A0A096LP01 95 aa7.27□□□□□ -1.25
TOP2A-205ENST00000581055 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
TOP2A-205ENST00000581055 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
TOP2A-205ENST00000581055 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
TOP2A-205ENST00000581055 KRTAP8-1Q8IUC2 63 aa7.25□□□□□ -1.25
TOP2A-205ENST00000581055 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
TOP2A-205ENST00000581055 KRTAP10-12P60413 245 aa7.22□□□□□ -1.25
TOP2A-205ENST00000581055 KMT2DO14686 5537 aa7.2□□□□□ -1.26
TOP2A-205ENST00000581055 H3BS24 57 aa7.19□□□□□ -1.26
TOP2A-205ENST00000581055 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
TOP2A-205ENST00000581055 MUC12Q9UKN1 5478 aa7.18□□□□□ -1.26
TOP2A-205ENST00000581055 SPRR2FQ96RM1 72 aa7.18□□□□□ -1.26
TOP2A-205ENST00000581055 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
TOP2A-205ENST00000581055 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
TOP2A-205ENST00000581055 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
TOP2A-205ENST00000581055 A8MU10 97 aa7.14□□□□□ -1.27
TOP2A-205ENST00000581055 MDN1Q9NU22 5596 aa7.08□□□□□ -1.28
TOP2A-205ENST00000581055 UQCR11O14957 56 aa7.07□□□□□ -1.28
TOP2A-205ENST00000581055 V9GYY9 64 aa7.04□□□□□ -1.28
TOP2A-205ENST00000581055 SPRR2EP22531 72 aa7.02□□□□□ -1.29
TOP2A-205ENST00000581055 SPRR2BP35325 72 aa7.02□□□□□ -1.29
TOP2A-205ENST00000581055 SPRR2AP35326 72 aa7.02□□□□□ -1.29
TOP2A-205ENST00000581055 Q1T7F1 81 aa6.96□□□□□ -1.3
TOP2A-205ENST00000581055 PCP4P48539 62 aa6.95□□□□□ -1.3
TOP2A-205ENST00000581055 LCE1AQ5T7P2 110 aa6.94□□□□□ -1.3
TOP2A-205ENST00000581055 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
TOP2A-205ENST00000581055 PSPHP1O15172 72 aa6.91□□□□□ -1.3
TOP2A-205ENST00000581055 KRTAP20-1Q3LI63 56 aa6.91□□□□□ -1.3
TOP2A-205ENST00000581055 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
TOP2A-205ENST00000581055 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
TOP2A-205ENST00000581055 TNP1P09430 55 aa6.84□□□□□ -1.31
TOP2A-205ENST00000581055 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
TOP2A-205ENST00000581055 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
TOP2A-205ENST00000581055 LCE1DQ5T752 114 aa6.82□□□□□ -1.32
TOP2A-205ENST00000581055 K7ERS5 55 aa6.8□□□□□ -1.32
TOP2A-205ENST00000581055 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms