RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 H0Y9P7 68 aa5.29□□□□□ -1.56
CCDC47-203ENST00000580986 H3BPC8 53 aa5.29□□□□□ -1.56
CCDC47-203ENST00000580986 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
CCDC47-203ENST00000580986 MP68P56378 58 aa5.27□□□□□ -1.57
CCDC47-203ENST00000580986 CYP4F30PQ9H0H9 118 aa5.26□□□□□ -1.57
CCDC47-203ENST00000580986 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
CCDC47-203ENST00000580986 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
CCDC47-203ENST00000580986 C1orf64Q8NEQ6 169 aa5.23□□□□□ -1.57
CCDC47-203ENST00000580986 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
CCDC47-203ENST00000580986 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
CCDC47-203ENST00000580986 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
CCDC47-203ENST00000580986 SERP2Q8N6R1 65 aa5.21□□□□□ -1.58
CCDC47-203ENST00000580986 MT1HP80294 61 aa5.19□□□□□ -1.58
CCDC47-203ENST00000580986 C4orf26Q17RF5 130 aa5.18□□□□□ -1.58
CCDC47-203ENST00000580986 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
CCDC47-203ENST00000580986 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
CCDC47-203ENST00000580986 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
CCDC47-203ENST00000580986 A8MUN3 132 aa5.13□□□□□ -1.59
CCDC47-203ENST00000580986 COX7CP15954 63 aa5.13□□□□□ -1.59
CCDC47-203ENST00000580986 KLKP1Q107X0 134 aa5.13□□□□□ -1.59
CCDC47-203ENST00000580986 C20orf197Q8N268 126 aa5.1□□□□□ -1.59
CCDC47-203ENST00000580986 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
CCDC47-203ENST00000580986 M0R2T5 61 aa5.07□□□□□ -1.6
CCDC47-203ENST00000580986 SNURFQ9Y675 71 aa5.07□□□□□ -1.6
CCDC47-203ENST00000580986 SPANXA2-OT1Q8N9U9 137 aa5.06□□□□□ -1.6
CCDC47-203ENST00000580986 DMAC1Q96GE9 116 aa5.06□□□□□ -1.6
CCDC47-203ENST00000580986 NDUFC1O43677 76 aa5.05□□□□□ -1.6
CCDC47-203ENST00000580986 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
CCDC47-203ENST00000580986 S4R3F8 94 aa5.04□□□□□ -1.6
CCDC47-203ENST00000580986 LCA10Q71F78 164 aa5.01□□□□□ -1.61
CCDC47-203ENST00000580986 H7BZZ5 65 aa4.99□□□□□ -1.61
CCDC47-203ENST00000580986 ACYP2P14621 99 aa4.98□□□□□ -1.61
CCDC47-203ENST00000580986 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
CCDC47-203ENST00000580986 CYSTM1Q9H1C7 97 aa4.95□□□□□ -1.62
CCDC47-203ENST00000580986 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
CCDC47-203ENST00000580986 H0YAA0 97 aa4.91□□□□□ -1.62
CCDC47-203ENST00000580986 MT2AP02795 61 aa4.91□□□□□ -1.62
CCDC47-203ENST00000580986 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
CCDC47-203ENST00000580986 SPTSSBQ8NFR3 76 aa4.88□□□□□ -1.63
CCDC47-203ENST00000580986 MT1FP04733 61 aa4.86□□□□□ -1.63
CCDC47-203ENST00000580986 CHKB-CPT1BH3BT56 60 aa4.85□□□□□ -1.63
CCDC47-203ENST00000580986 TMEM258P61165 79 aa4.85□□□□□ -1.63
CCDC47-203ENST00000580986 KRTAP10-10P60014 251 aa4.84□□□□□ -1.63
CCDC47-203ENST00000580986 COA5Q86WW8 74 aa4.84□□□□□ -1.63
CCDC47-203ENST00000580986 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
CCDC47-203ENST00000580986 PCP4P48539 62 aa4.77□□□□□ -1.65
CCDC47-203ENST00000580986 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
CCDC47-203ENST00000580986 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
CCDC47-203ENST00000580986 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
CCDC47-203ENST00000580986 SPRR2GQ9BYE4 73 aa4.73□□□□□ -1.65
CCDC47-203ENST00000580986 P0C880 135 aa4.69□□□□□ -1.66
CCDC47-203ENST00000580986 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
CCDC47-203ENST00000580986 SERP1Q9Y6X1 66 aa4.68□□□□□ -1.66
CCDC47-203ENST00000580986 SEC61GP60059 68 aa4.66□□□□□ -1.66
CCDC47-203ENST00000580986 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
CCDC47-203ENST00000580986 R4GN34 69 aa4.64□□□□□ -1.67
CCDC47-203ENST00000580986 M0QZ58 72 aa4.62□□□□□ -1.67
CCDC47-203ENST00000580986 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
CCDC47-203ENST00000580986 A0A1B0GU69 56 aa4.59□□□□□ -1.67
CCDC47-203ENST00000580986 Q5VV11 94 aa4.59□□□□□ -1.67
CCDC47-203ENST00000580986 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
CCDC47-203ENST00000580986 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
CCDC47-203ENST00000580986 MT1BP07438 61 aa4.56□□□□□ -1.68
CCDC47-203ENST00000580986 PRR15LQ9BU68 103 aa4.56□□□□□ -1.68
CCDC47-203ENST00000580986 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
CCDC47-203ENST00000580986 USH2AO75445 5202 aa4.55□□□□□ -1.68
CCDC47-203ENST00000580986 V9GYY9 64 aa4.55□□□□□ -1.68
CCDC47-203ENST00000580986 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
CCDC47-203ENST00000580986 A0A1B0GU33 70 aa4.53□□□□□ -1.68
CCDC47-203ENST00000580986 A6NN06 94 aa4.53□□□□□ -1.68
CCDC47-203ENST00000580986 SMIM26A0A096LP01 95 aa4.52□□□□□ -1.69
CCDC47-203ENST00000580986 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
CCDC47-203ENST00000580986 Q1T7F1 81 aa4.51□□□□□ -1.69
CCDC47-203ENST00000580986 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
CCDC47-203ENST00000580986 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
CCDC47-203ENST00000580986 LINC01554Q52M75 96 aa4.46□□□□□ -1.7
CCDC47-203ENST00000580986 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
CCDC47-203ENST00000580986 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
CCDC47-203ENST00000580986 UQCR11O14957 56 aa4.42□□□□□ -1.7
CCDC47-203ENST00000580986 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
CCDC47-203ENST00000580986 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
CCDC47-203ENST00000580986 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
CCDC47-203ENST00000580986 PSPHP1O15172 72 aa4.37□□□□□ -1.71
CCDC47-203ENST00000580986 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
CCDC47-203ENST00000580986 A0A0D9SG42 100 aa4.35□□□□□ -1.71
CCDC47-203ENST00000580986 MT1XP80297 61 aa4.35□□□□□ -1.71
CCDC47-203ENST00000580986 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
CCDC47-203ENST00000580986 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
CCDC47-203ENST00000580986 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
CCDC47-203ENST00000580986 A8MU10 97 aa4.31□□□□□ -1.72
CCDC47-203ENST00000580986 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
CCDC47-203ENST00000580986 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
CCDC47-203ENST00000580986 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
CCDC47-203ENST00000580986 A6NED7 52 aa4.27□□□□□ -1.73
CCDC47-203ENST00000580986 K7ERS5 55 aa4.21□□□□□ -1.74
CCDC47-203ENST00000580986 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
CCDC47-203ENST00000580986 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
CCDC47-203ENST00000580986 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
CCDC47-203ENST00000580986 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
CCDC47-203ENST00000580986 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms