RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 FCGBPQ9Y6R7 5405 aaPredicted RBP7.67□□□□□ -1.18
IFT20-210ENST00000580357 A8MUN3 132 aa7.65□□□□□ -1.18
IFT20-210ENST00000580357 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
IFT20-210ENST00000580357 KRTAP19-1Q8IUB9 90 aa7.61□□□□□ -1.19
IFT20-210ENST00000580357 FAM236AA0A1B0GUQ0 79 aa7.6□□□□□ -1.19
IFT20-210ENST00000580357 FAM236BA0A1B0GV22 79 aa7.6□□□□□ -1.19
IFT20-210ENST00000580357 KLKP1Q107X0 134 aa7.6□□□□□ -1.19
IFT20-210ENST00000580357 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
IFT20-210ENST00000580357 NDUFC1O43677 76 aa7.58□□□□□ -1.2
IFT20-210ENST00000580357 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
IFT20-210ENST00000580357 MT-ATP8P03928 68 aa7.57□□□□□ -1.2
IFT20-210ENST00000580357 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
IFT20-210ENST00000580357 TRAV7A0A075B6U4 112 aa7.5□□□□□ -1.21
IFT20-210ENST00000580357 H0YAA0 97 aa7.46□□□□□ -1.22
IFT20-210ENST00000580357 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
IFT20-210ENST00000580357 KRTAP19-6Q3LI70 58 aa7.44□□□□□ -1.22
IFT20-210ENST00000580357 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
IFT20-210ENST00000580357 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
IFT20-210ENST00000580357 ACYP2P14621 99 aa7.36□□□□□ -1.23
IFT20-210ENST00000580357 Q5VV11 94 aa7.36□□□□□ -1.23
IFT20-210ENST00000580357 KRTAP19-8Q3LI54 63 aa7.34□□□□□ -1.23
IFT20-210ENST00000580357 KRTAP6-3Q3LI67 103 aa7.33□□□□□ -1.24
IFT20-210ENST00000580357 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
IFT20-210ENST00000580357 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
IFT20-210ENST00000580357 C20orf197Q8N268 126 aa7.28□□□□□ -1.24
IFT20-210ENST00000580357 MT1BP07438 61 aa7.27□□□□□ -1.25
IFT20-210ENST00000580357 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.25
IFT20-210ENST00000580357 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
IFT20-210ENST00000580357 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
IFT20-210ENST00000580357 A6NN06 94 aa7.19□□□□□ -1.26
IFT20-210ENST00000580357 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
IFT20-210ENST00000580357 NEBP20929 6669 aa7.19□□□□□ -1.26
IFT20-210ENST00000580357 R4GN34 69 aa7.17□□□□□ -1.26
IFT20-210ENST00000580357 P0C880 135 aa7.14□□□□□ -1.27
IFT20-210ENST00000580357 COX7CP15954 63 aa7.12□□□□□ -1.27
IFT20-210ENST00000580357 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
IFT20-210ENST00000580357 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
IFT20-210ENST00000580357 KRTAP20-1Q3LI63 56 aa7.1□□□□□ -1.27
IFT20-210ENST00000580357 M0QZ58 72 aa7.08□□□□□ -1.28
IFT20-210ENST00000580357 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
IFT20-210ENST00000580357 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
IFT20-210ENST00000580357 PRO2289Q9P1D8 64 aa7□□□□□ -1.29
IFT20-210ENST00000580357 COA5Q86WW8 74 aa6.96□□□□□ -1.3
IFT20-210ENST00000580357 LINC01554Q52M75 96 aa6.95□□□□□ -1.3
IFT20-210ENST00000580357 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
IFT20-210ENST00000580357 H7BZZ5 65 aa6.94□□□□□ -1.3
IFT20-210ENST00000580357 SEC61GP60059 68 aa6.88□□□□□ -1.31
IFT20-210ENST00000580357 MT1XP80297 61 aa6.86□□□□□ -1.31
IFT20-210ENST00000580357 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
IFT20-210ENST00000580357 SERP1Q9Y6X1 66 aa6.85□□□□□ -1.31
IFT20-210ENST00000580357 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
IFT20-210ENST00000580357 KRTAP2-3P0C7H8 128 aa6.74□□□□□ -1.33
IFT20-210ENST00000580357 KRTAP2-4Q9BYR9 128 aa6.74□□□□□ -1.33
IFT20-210ENST00000580357 KRTAP5-9P26371 169 aa6.73□□□□□ -1.33
IFT20-210ENST00000580357 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
IFT20-210ENST00000580357 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
IFT20-210ENST00000580357 KRTAP13-4Q3LI77 160 aa6.71□□□□□ -1.34
IFT20-210ENST00000580357 MDN1Q9NU22 5596 aa6.71□□□□□ -1.34
IFT20-210ENST00000580357 KMT2DO14686 5537 aa6.7□□□□□ -1.34
IFT20-210ENST00000580357 A0A1B0GU33 70 aa6.69□□□□□ -1.34
IFT20-210ENST00000580357 A0A1B0GU69 56 aa6.65□□□□□ -1.34
IFT20-210ENST00000580357 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
IFT20-210ENST00000580357 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
IFT20-210ENST00000580357 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
IFT20-210ENST00000580357 PCP4P48539 62 aa6.58□□□□□ -1.36
IFT20-210ENST00000580357 A0A0D9SG42 100 aa6.57□□□□□ -1.36
IFT20-210ENST00000580357 TMEM258P61165 79 aa6.57□□□□□ -1.36
IFT20-210ENST00000580357 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
IFT20-210ENST00000580357 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
IFT20-210ENST00000580357 SMIM26A0A096LP01 95 aa6.54□□□□□ -1.36
IFT20-210ENST00000580357 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
IFT20-210ENST00000580357 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
IFT20-210ENST00000580357 SPRR2EP22531 72 aa6.52□□□□□ -1.37
IFT20-210ENST00000580357 SPRR2BP35325 72 aa6.52□□□□□ -1.37
IFT20-210ENST00000580357 SPRR2AP35326 72 aa6.52□□□□□ -1.37
IFT20-210ENST00000580357 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
IFT20-210ENST00000580357 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
IFT20-210ENST00000580357 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
IFT20-210ENST00000580357 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
IFT20-210ENST00000580357 KRTAP4-8Q9BYQ9 185 aa6.49□□□□□ -1.37
IFT20-210ENST00000580357 LINC01558Q9Y6Z2 57 aa6.48□□□□□ -1.37
IFT20-210ENST00000580357 KRTAP12-1P59990 96 aa6.45□□□□□ -1.38
IFT20-210ENST00000580357 A8MU10 97 aa6.35□□□□□ -1.39
IFT20-210ENST00000580357 LCE1AQ5T7P2 110 aa6.33□□□□□ -1.4
IFT20-210ENST00000580357 UQCR11O14957 56 aa6.32□□□□□ -1.4
IFT20-210ENST00000580357 SPRR2DP22532 72 aa6.32□□□□□ -1.4
IFT20-210ENST00000580357 V9GYY9 64 aa6.27□□□□□ -1.41
IFT20-210ENST00000580357 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
IFT20-210ENST00000580357 GPR98Q8WXG9 6306 aa6.24□□□□□ -1.41
IFT20-210ENST00000580357 Q1T7F1 81 aa6.18□□□□□ -1.42
IFT20-210ENST00000580357 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
IFT20-210ENST00000580357 TNP1P09430 55 aa6.17□□□□□ -1.42
IFT20-210ENST00000580357 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
IFT20-210ENST00000580357 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
IFT20-210ENST00000580357 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
IFT20-210ENST00000580357 K7ERS5 55 aa6.09□□□□□ -1.43
IFT20-210ENST00000580357 PSPHP1O15172 72 aa6.09□□□□□ -1.43
IFT20-210ENST00000580357 MT1EP04732 61 aa6.08□□□□□ -1.44
IFT20-210ENST00000580357 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
IFT20-210ENST00000580357 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms