RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
CDK5RAP3-208ENST00000578525 S4R3F8 94 aa4.77□□□□□ -1.65
CDK5RAP3-208ENST00000578525 RYR3Q15413 4870 aa4.77□□□□□ -1.65
CDK5RAP3-208ENST00000578525 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
CDK5RAP3-208ENST00000578525 KRTAP3-3Q9BYR6 98 aa4.76□□□□□ -1.65
CDK5RAP3-208ENST00000578525 RBM12B-AS1Q9P1G2 102 aa4.75□□□□□ -1.65
CDK5RAP3-208ENST00000578525 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.66
CDK5RAP3-208ENST00000578525 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
CDK5RAP3-208ENST00000578525 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
CDK5RAP3-208ENST00000578525 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
CDK5RAP3-208ENST00000578525 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
CDK5RAP3-208ENST00000578525 KRTAP4-5Q9BYR2 181 aa4.67□□□□□ -1.66
CDK5RAP3-208ENST00000578525 K7ERS5 55 aa4.65□□□□□ -1.67
CDK5RAP3-208ENST00000578525 DMBT1Q9UGM3 2413 aaPredicted RBP4.65□□□□□ -1.67
CDK5RAP3-208ENST00000578525 MYCBP2O75592 4640 aa4.65□□□□□ -1.67
CDK5RAP3-208ENST00000578525 SEC61BP60468 96 aaKnown RBP4.61□□□□□ -1.67
CDK5RAP3-208ENST00000578525 KRTAP13-4Q3LI77 160 aa4.61□□□□□ -1.67
CDK5RAP3-208ENST00000578525 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
CDK5RAP3-208ENST00000578525 P0C880 135 aa4.6□□□□□ -1.67
CDK5RAP3-208ENST00000578525 CSAG1Q6PB30 78 aa4.6□□□□□ -1.67
CDK5RAP3-208ENST00000578525 J3QL48 77 aa4.58□□□□□ -1.68
CDK5RAP3-208ENST00000578525 A0A0D9SG42 100 aa4.56□□□□□ -1.68
CDK5RAP3-208ENST00000578525 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
CDK5RAP3-208ENST00000578525 ROMO1P60602 79 aa4.52□□□□□ -1.69
CDK5RAP3-208ENST00000578525 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CDK5RAP3-208ENST00000578525 M0QZ58 72 aa4.5□□□□□ -1.69
CDK5RAP3-208ENST00000578525 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
CDK5RAP3-208ENST00000578525 LRP2P98164 4655 aa4.47□□□□□ -1.69
CDK5RAP3-208ENST00000578525 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
CDK5RAP3-208ENST00000578525 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
CDK5RAP3-208ENST00000578525 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
CDK5RAP3-208ENST00000578525 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
CDK5RAP3-208ENST00000578525 HERC2O95714 4834 aa4.43□□□□□ -1.7
CDK5RAP3-208ENST00000578525 BIRC6Q9NR09 4857 aa4.43□□□□□ -1.7
CDK5RAP3-208ENST00000578525 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
CDK5RAP3-208ENST00000578525 LPAP08519 4548 aa4.43□□□□□ -1.7
CDK5RAP3-208ENST00000578525 KRTAP19-2Q3LHN2 52 aa4.42□□□□□ -1.7
CDK5RAP3-208ENST00000578525 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
CDK5RAP3-208ENST00000578525 R4GN34 69 aa4.37□□□□□ -1.71
CDK5RAP3-208ENST00000578525 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
CDK5RAP3-208ENST00000578525 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
CDK5RAP3-208ENST00000578525 HERC1Q15751 4861 aa4.24□□□□□ -1.73
CDK5RAP3-208ENST00000578525 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
CDK5RAP3-208ENST00000578525 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
CDK5RAP3-208ENST00000578525 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
CDK5RAP3-208ENST00000578525 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
CDK5RAP3-208ENST00000578525 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
CDK5RAP3-208ENST00000578525 MT1HP80294 61 aa4.08□□□□□ -1.76
CDK5RAP3-208ENST00000578525 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
CDK5RAP3-208ENST00000578525 M0R2T5 61 aa4.06□□□□□ -1.76
CDK5RAP3-208ENST00000578525 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
CDK5RAP3-208ENST00000578525 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
CDK5RAP3-208ENST00000578525 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
CDK5RAP3-208ENST00000578525 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
CDK5RAP3-208ENST00000578525 MT2AP02795 61 aa4□□□□□ -1.77
CDK5RAP3-208ENST00000578525 TNP1P09430 55 aa4□□□□□ -1.77
CDK5RAP3-208ENST00000578525 RNF213Q63HN8 5207 aa3.98□□□□□ -1.77
CDK5RAP3-208ENST00000578525 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
CDK5RAP3-208ENST00000578525 MT1FP04733 61 aa3.98□□□□□ -1.77
CDK5RAP3-208ENST00000578525 KRTAP10-10P60014 251 aa3.97□□□□□ -1.77
CDK5RAP3-208ENST00000578525 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
CDK5RAP3-208ENST00000578525 H3BS24 57 aa3.94□□□□□ -1.78
CDK5RAP3-208ENST00000578525 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
CDK5RAP3-208ENST00000578525 MUC2Q02817 5179 aa3.91□□□□□ -1.78
CDK5RAP3-208ENST00000578525 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
CDK5RAP3-208ENST00000578525 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
CDK5RAP3-208ENST00000578525 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
CDK5RAP3-208ENST00000578525 MT1BP07438 61 aa3.85□□□□□ -1.79
CDK5RAP3-208ENST00000578525 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
CDK5RAP3-208ENST00000578525 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
CDK5RAP3-208ENST00000578525 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
CDK5RAP3-208ENST00000578525 MT1XP80297 61 aa3.78□□□□□ -1.8
CDK5RAP3-208ENST00000578525 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
CDK5RAP3-208ENST00000578525 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
CDK5RAP3-208ENST00000578525 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
CDK5RAP3-208ENST00000578525 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
CDK5RAP3-208ENST00000578525 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
CDK5RAP3-208ENST00000578525 LCE2AQ5TA79 106 aaPredicted RBP3.68□□□□□ -1.82
CDK5RAP3-208ENST00000578525 LCE2BO14633 110 aa3.65□□□□□ -1.83
CDK5RAP3-208ENST00000578525 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
CDK5RAP3-208ENST00000578525 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
CDK5RAP3-208ENST00000578525 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
CDK5RAP3-208ENST00000578525 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
CDK5RAP3-208ENST00000578525 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
CDK5RAP3-208ENST00000578525 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
CDK5RAP3-208ENST00000578525 KRTAP4-8A0A0G2JLE6 195 aa3.42□□□□□ -1.86
CDK5RAP3-208ENST00000578525 KRTAP4-8Q9BYQ9 185 aa3.42□□□□□ -1.86
CDK5RAP3-208ENST00000578525 USH2AO75445 5202 aa3.4□□□□□ -1.86
CDK5RAP3-208ENST00000578525 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
CDK5RAP3-208ENST00000578525 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
CDK5RAP3-208ENST00000578525 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
CDK5RAP3-208ENST00000578525 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
CDK5RAP3-208ENST00000578525 LCE2DQ5TA82 110 aaPredicted RBP3.31□□□□□ -1.88
CDK5RAP3-208ENST00000578525 MT1EP04732 61 aa3.3□□□□□ -1.88
CDK5RAP3-208ENST00000578525 MT1LQ93083 61 aa3.29□□□□□ -1.88
CDK5RAP3-208ENST00000578525 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
CDK5RAP3-208ENST00000578525 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
CDK5RAP3-208ENST00000578525 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
CDK5RAP3-208ENST00000578525 KRTAP9-6A8MVA2 160 aa3.23□□□□□ -1.89
CDK5RAP3-208ENST00000578525 INE1O15225 51 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms