RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	KRTAP3-3	Q9BYR6	98 aa		6.27	□□□□□ -1.41
CSNK1D-208	ENST00000578501	OCR1	Q9BZK8	76 aa		6.27	□□□□□ -1.41
CSNK1D-208	ENST00000578501	FAM236A	A0A1B0GUQ0	79 aa		6.25	□□□□□ -1.41
CSNK1D-208	ENST00000578501	FAM236B	A0A1B0GV22	79 aa		6.25	□□□□□ -1.41
CSNK1D-208	ENST00000578501	KRTAP20-1	Q3LI63	56 aa		6.25	□□□□□ -1.41
CSNK1D-208	ENST00000578501	MP68	P56378	58 aa		6.23	□□□□□ -1.41
CSNK1D-208	ENST00000578501	LINC00208	Q96KT6	92 aa		6.23	□□□□□ -1.41
CSNK1D-208	ENST00000578501		A8MUN3	132 aa		6.21	□□□□□ -1.42
CSNK1D-208	ENST00000578501	KLKP1	Q107X0	134 aa		6.19	□□□□□ -1.42
CSNK1D-208	ENST00000578501	IMUP	Q9GZP8	106 aa		6.19	□□□□□ -1.42
CSNK1D-208	ENST00000578501		H3BPC8	53 aa		6.18	□□□□□ -1.42
CSNK1D-208	ENST00000578501	MT-ATP8	P03928	68 aa		6.17	□□□□□ -1.42
CSNK1D-208	ENST00000578501	SPRR2G	Q9BYE4	73 aa		6.17	□□□□□ -1.42
CSNK1D-208	ENST00000578501	NDUFC1	O43677	76 aa		6.16	□□□□□ -1.42
CSNK1D-208	ENST00000578501	SCGB1A1	P11684	91 aa		6.15	□□□□□ -1.42
CSNK1D-208	ENST00000578501		H0YAA0	97 aa		6.12	□□□□□ -1.43
CSNK1D-208	ENST00000578501	KRTAP19-8	Q3LI54	63 aa		6.12	□□□□□ -1.43
CSNK1D-208	ENST00000578501	CRIPT	Q9P021	101 aa		6.12	□□□□□ -1.43
CSNK1D-208	ENST00000578501	NEB	P20929	6669 aa		6.12	□□□□□ -1.43
CSNK1D-208	ENST00000578501		Q5VV11	94 aa		6.1	□□□□□ -1.43
CSNK1D-208	ENST00000578501	MT1B	P07438	61 aa		6.09	□□□□□ -1.43
CSNK1D-208	ENST00000578501	PCP4	P48539	62 aa		6.08	□□□□□ -1.44
CSNK1D-208	ENST00000578501	SMIM20	Q8N5G0	67 aa		6.06	□□□□□ -1.44
CSNK1D-208	ENST00000578501	DMAC1	Q96GE9	116 aa		6.05	□□□□□ -1.44
CSNK1D-208	ENST00000578501	MUC12	Q9UKN1	5478 aa		6.02	□□□□□ -1.45
CSNK1D-208	ENST00000578501	TRAV7	A0A075B6U4	112 aa		6.01	□□□□□ -1.45
CSNK1D-208	ENST00000578501	ADM2	Q7Z4H4	148 aa		6.01	□□□□□ -1.45
CSNK1D-208	ENST00000578501		A6NN06	94 aa		5.99	□□□□□ -1.45
CSNK1D-208	ENST00000578501	KRTAP2-3	P0C7H8	128 aa		5.97	□□□□□ -1.45
CSNK1D-208	ENST00000578501	KRTAP2-4	Q9BYR9	128 aa		5.97	□□□□□ -1.45
CSNK1D-208	ENST00000578501	KRTAP5-9	P26371	169 aa		5.96	□□□□□ -1.46
CSNK1D-208	ENST00000578501	KRTAP10-5	P60370	271 aa		5.94	□□□□□ -1.46
CSNK1D-208	ENST00000578501	ACYP2	P14621	99 aa		5.92	□□□□□ -1.46
CSNK1D-208	ENST00000578501	C20orf197	Q8N268	126 aa		5.91	□□□□□ -1.46
CSNK1D-208	ENST00000578501	SERP2	Q8N6R1	65 aa		5.89	□□□□□ -1.47
CSNK1D-208	ENST00000578501		P0C880	135 aa		5.88	□□□□□ -1.47
CSNK1D-208	ENST00000578501	KRTAP3-2	Q9BYR7	98 aa		5.86	□□□□□ -1.47
CSNK1D-208	ENST00000578501	ANAPC13	Q9BS18	74 aa		5.85	□□□□□ -1.47
CSNK1D-208	ENST00000578501		R4GN34	69 aa		5.85	□□□□□ -1.47
CSNK1D-208	ENST00000578501	SPTSSB	Q8NFR3	76 aa		5.84	□□□□□ -1.47
CSNK1D-208	ENST00000578501	SNURF	Q9Y675	71 aa		5.84	□□□□□ -1.47
CSNK1D-208	ENST00000578501	COX7C	P15954	63 aa		5.81	□□□□□ -1.48
CSNK1D-208	ENST00000578501	SPANXA2-OT1	Q8N9U9	137 aa		5.81	□□□□□ -1.48
CSNK1D-208	ENST00000578501		M0QZ58	72 aa		5.79	□□□□□ -1.48
CSNK1D-208	ENST00000578501	PLAC4	Q8WY50	150 aa		5.79	□□□□□ -1.48
CSNK1D-208	ENST00000578501	KMT2D	O14686	5537 aa		5.79	□□□□□ -1.48
CSNK1D-208	ENST00000578501	CHKB-CPT1B	H3BT56	60 aa		5.78	□□□□□ -1.48
CSNK1D-208	ENST00000578501	PRO2289	Q9P1D8	64 aa		5.76	□□□□□ -1.49
CSNK1D-208	ENST00000578501	KRTAP2-2	Q9BYT5	123 aa		5.75	□□□□□ -1.49
CSNK1D-208	ENST00000578501	KRTAP2-1	Q9BYU5	128 aa		5.75	□□□□□ -1.49
CSNK1D-208	ENST00000578501	MDN1	Q9NU22	5596 aa		5.74	□□□□□ -1.49
CSNK1D-208	ENST00000578501	MT1X	P80297	61 aa		5.73	□□□□□ -1.49
CSNK1D-208	ENST00000578501	SPRR2E	P22531	72 aa		5.7	□□□□□ -1.5
CSNK1D-208	ENST00000578501	SPRR2B	P35325	72 aa		5.7	□□□□□ -1.5
CSNK1D-208	ENST00000578501	SPRR2A	P35326	72 aa		5.7	□□□□□ -1.5
CSNK1D-208	ENST00000578501	LINC01554	Q52M75	96 aa		5.68	□□□□□ -1.5
CSNK1D-208	ENST00000578501	SPRR2F	Q96RM1	72 aa		5.66	□□□□□ -1.5
CSNK1D-208	ENST00000578501	CCDC179	H3BU77	68 aa		5.65	□□□□□ -1.5
CSNK1D-208	ENST00000578501	CYSTM1	Q9H1C7	97 aa		5.62	□□□□□ -1.51
CSNK1D-208	ENST00000578501	KRTAP12-2	P59991	146 aa		5.61	□□□□□ -1.51
CSNK1D-208	ENST00000578501	COA5	Q86WW8	74 aa		5.61	□□□□□ -1.51
CSNK1D-208	ENST00000578501		H7BZZ5	65 aa		5.6	□□□□□ -1.51
CSNK1D-208	ENST00000578501	ATP5E	P56381	51 aa	Predicted RBP	5.57	□□□□□ -1.52
CSNK1D-208	ENST00000578501	LCE1A	Q5T7P2	110 aa		5.55	□□□□□ -1.52
CSNK1D-208	ENST00000578501	SPRR2D	P22532	72 aa		5.53	□□□□□ -1.52
CSNK1D-208	ENST00000578501	TMEM258	P61165	79 aa		5.53	□□□□□ -1.52
CSNK1D-208	ENST00000578501	KRTAP13-4	Q3LI77	160 aa		5.52	□□□□□ -1.53
CSNK1D-208	ENST00000578501	SEC61G	P60059	68 aa		5.5	□□□□□ -1.53
CSNK1D-208	ENST00000578501	KRTAP8-1	Q8IUC2	63 aa		5.5	□□□□□ -1.53
CSNK1D-208	ENST00000578501	SERP1	Q9Y6X1	66 aa		5.49	□□□□□ -1.53
CSNK1D-208	ENST00000578501	KRTAP10-12	P60413	245 aa		5.46	□□□□□ -1.54
CSNK1D-208	ENST00000578501	KRTAP10-7	P60409	375 aa	Predicted RBP	5.45	□□□□□ -1.54
CSNK1D-208	ENST00000578501	KRTAP4-8	A0A0G2JLE6	195 aa		5.43	□□□□□ -1.54
CSNK1D-208	ENST00000578501	KRTAP4-8	Q9BYQ9	185 aa		5.43	□□□□□ -1.54
CSNK1D-208	ENST00000578501	LCE3B	Q5TA77	95 aa		5.42	□□□□□ -1.54
CSNK1D-208	ENST00000578501		A0A1B0GU33	70 aa		5.4	□□□□□ -1.54
CSNK1D-208	ENST00000578501	RPS28	P62857	69 aa	Known RBP	5.39	□□□□□ -1.55
CSNK1D-208	ENST00000578501	CAMK2N1	Q7Z7J9	78 aa		5.38	□□□□□ -1.55
CSNK1D-208	ENST00000578501	SPATA8	Q6RVD6	105 aa		5.35	□□□□□ -1.55
CSNK1D-208	ENST00000578501		A0A0D9SG42	100 aa		5.33	□□□□□ -1.56
CSNK1D-208	ENST00000578501		A0A1B0GU69	56 aa		5.33	□□□□□ -1.56
CSNK1D-208	ENST00000578501	GPR98	Q8WXG9	6306 aa		5.29	□□□□□ -1.56
CSNK1D-208	ENST00000578501	PRR15L	Q9BU68	103 aa		5.28	□□□□□ -1.56
CSNK1D-208	ENST00000578501	KRTAP12-1	P59990	96 aa		5.27	□□□□□ -1.57
CSNK1D-208	ENST00000578501	SPINT4	Q6UDR6	99 aa		5.27	□□□□□ -1.57
CSNK1D-208	ENST00000578501	SMIM26	A0A096LP01	95 aa		5.25	□□□□□ -1.57
CSNK1D-208	ENST00000578501	SVIP	Q8NHG7	77 aa		5.25	□□□□□ -1.57
CSNK1D-208	ENST00000578501		V9GYY9	64 aa		5.22	□□□□□ -1.57
CSNK1D-208	ENST00000578501	LINC01558	Q9Y6Z2	57 aa		5.18	□□□□□ -1.58
CSNK1D-208	ENST00000578501		A8MU10	97 aa		5.16	□□□□□ -1.58
CSNK1D-208	ENST00000578501	KRTAP4-9	Q9BYQ8	210 aa		5.15	□□□□□ -1.59
CSNK1D-208	ENST00000578501	KRTAP19-7	Q3SYF9	63 aa		5.13	□□□□□ -1.59
CSNK1D-208	ENST00000578501		Q1T7F1	81 aa		5.1	□□□□□ -1.59
CSNK1D-208	ENST00000578501	MT1E	P04732	61 aa		5.07	□□□□□ -1.6
CSNK1D-208	ENST00000578501	UQCR11	O14957	56 aa		5.05	□□□□□ -1.6
CSNK1D-208	ENST00000578501	LCE5A	Q5TCM9	118 aa		5.04	□□□□□ -1.6
CSNK1D-208	ENST00000578501	DST	Q03001	7570 aa	Known RBP	5.04	□□□□□ -1.6
CSNK1D-208	ENST00000578501	PSPHP1	O15172	72 aa		5.03	□□□□□ -1.6
CSNK1D-208	ENST00000578501	C10orf95	Q9H7T3	257 aa		5.03	□□□□□ -1.6
CSNK1D-208	ENST00000578501	KRTAP19-3	Q7Z4W3	81 aa		5.02	□□□□□ -1.61

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