RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
COPS3-215ENST00000578317 MT3P25713 68 aa4.17□□□□□ -1.74
COPS3-215ENST00000578317 H3BPC8 53 aa4.16□□□□□ -1.74
COPS3-215ENST00000578317 SPINK7P58062 85 aa4.16□□□□□ -1.74
COPS3-215ENST00000578317 SERP2Q8N6R1 65 aa4.16□□□□□ -1.74
COPS3-215ENST00000578317 H0Y9P7 68 aa4.15□□□□□ -1.74
COPS3-215ENST00000578317 MP68P56378 58 aa4.15□□□□□ -1.74
COPS3-215ENST00000578317 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
COPS3-215ENST00000578317 LOC101927531A0A1B0GV80 90 aa4.13□□□□□ -1.75
COPS3-215ENST00000578317 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
COPS3-215ENST00000578317 V9GYY9 64 aa4.13□□□□□ -1.75
COPS3-215ENST00000578317 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
COPS3-215ENST00000578317 CYP4F30PQ9H0H9 118 aa4.13□□□□□ -1.75
COPS3-215ENST00000578317 LINC00208Q96KT6 92 aa4.12□□□□□ -1.75
COPS3-215ENST00000578317 COX7CP15954 63 aa4.11□□□□□ -1.75
COPS3-215ENST00000578317 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
COPS3-215ENST00000578317 A0A0U1RQV1 116 aa4.1□□□□□ -1.75
COPS3-215ENST00000578317 HRES1P13985 223 aa4.1□□□□□ -1.75
COPS3-215ENST00000578317 ANAPC13Q9BS18 74 aa4.1□□□□□ -1.75
COPS3-215ENST00000578317 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
COPS3-215ENST00000578317 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
COPS3-215ENST00000578317 C20orf197Q8N268 126 aa4.07□□□□□ -1.76
COPS3-215ENST00000578317 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
COPS3-215ENST00000578317 RBM12B-AS1Q9P1G2 102 aa4.05□□□□□ -1.76
COPS3-215ENST00000578317 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
COPS3-215ENST00000578317 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
COPS3-215ENST00000578317 NDUFC1O43677 76 aa4.03□□□□□ -1.76
COPS3-215ENST00000578317 COX6B2Q6YFQ2 88 aa4.03□□□□□ -1.76
COPS3-215ENST00000578317 C4orf26Q17RF5 130 aa4.03□□□□□ -1.77
COPS3-215ENST00000578317 CCDC179H3BU77 68 aa4□□□□□ -1.77
COPS3-215ENST00000578317 SPANXA2-OT1Q8N9U9 137 aa4□□□□□ -1.77
COPS3-215ENST00000578317 A8MUN3 132 aa3.99□□□□□ -1.77
COPS3-215ENST00000578317 H7BZZ5 65 aa3.99□□□□□ -1.77
COPS3-215ENST00000578317 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
COPS3-215ENST00000578317 FAM236DA0A1B0GTK5 79 aa3.98□□□□□ -1.77
COPS3-215ENST00000578317 FAM236CP0DP71 79 aa3.98□□□□□ -1.77
COPS3-215ENST00000578317 CYSTM1Q9H1C7 97 aa3.97□□□□□ -1.77
COPS3-215ENST00000578317 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
COPS3-215ENST00000578317 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
COPS3-215ENST00000578317 ACYP2P14621 99 aa3.93□□□□□ -1.78
COPS3-215ENST00000578317 MT1HP80294 61 aa3.92□□□□□ -1.78
COPS3-215ENST00000578317 TMEM258P61165 79 aa3.89□□□□□ -1.79
COPS3-215ENST00000578317 ATP5EP56381 51 aaPredicted RBP3.88□□□□□ -1.79
COPS3-215ENST00000578317 S4R3F8 94 aa3.88□□□□□ -1.79
COPS3-215ENST00000578317 LCA10Q71F78 164 aa3.88□□□□□ -1.79
COPS3-215ENST00000578317 RPS28P62857 69 aaKnown RBP3.87□□□□□ -1.79
COPS3-215ENST00000578317 CSAG1Q6PB30 78 aa3.85□□□□□ -1.79
COPS3-215ENST00000578317 M0R2T5 61 aa3.84□□□□□ -1.79
COPS3-215ENST00000578317 COA5Q86WW8 74 aa3.83□□□□□ -1.8
COPS3-215ENST00000578317 CHKB-CPT1BH3BT56 60 aa3.82□□□□□ -1.8
COPS3-215ENST00000578317 SPTSSBQ8NFR3 76 aa3.81□□□□□ -1.8
COPS3-215ENST00000578317 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
COPS3-215ENST00000578317 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
COPS3-215ENST00000578317 H0YAA0 97 aa3.78□□□□□ -1.8
COPS3-215ENST00000578317 PMAIP1Q13794 54 aa3.78□□□□□ -1.8
COPS3-215ENST00000578317 SERP1Q9Y6X1 66 aa3.77□□□□□ -1.81
COPS3-215ENST00000578317 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
COPS3-215ENST00000578317 MT2AP02795 61 aa3.72□□□□□ -1.81
COPS3-215ENST00000578317 ADM2Q7Z4H4 148 aa3.7□□□□□ -1.82
COPS3-215ENST00000578317 MT1FP04733 61 aa3.69□□□□□ -1.82
COPS3-215ENST00000578317 KRTAP10-10P60014 251 aa3.68□□□□□ -1.82
COPS3-215ENST00000578317 CRIPTQ9P021 101 aa3.67□□□□□ -1.82
COPS3-215ENST00000578317 SMIM26A0A096LP01 95 aa3.66□□□□□ -1.82
COPS3-215ENST00000578317 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
COPS3-215ENST00000578317 P0C880 135 aa3.66□□□□□ -1.82
COPS3-215ENST00000578317 A0A1B0GU69 56 aa3.63□□□□□ -1.83
COPS3-215ENST00000578317 Q1T7F1 81 aa3.63□□□□□ -1.83
COPS3-215ENST00000578317 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
COPS3-215ENST00000578317 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
COPS3-215ENST00000578317 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
COPS3-215ENST00000578317 PRR15LQ9BU68 103 aa3.62□□□□□ -1.83
COPS3-215ENST00000578317 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
COPS3-215ENST00000578317 M0QZ58 72 aa3.6□□□□□ -1.83
COPS3-215ENST00000578317 A0A1B0GU33 70 aa3.59□□□□□ -1.84
COPS3-215ENST00000578317 R4GN34 69 aa3.59□□□□□ -1.84
COPS3-215ENST00000578317 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
COPS3-215ENST00000578317 USH2AO75445 5202 aa3.57□□□□□ -1.84
COPS3-215ENST00000578317 Q5VV11 94 aa3.55□□□□□ -1.84
COPS3-215ENST00000578317 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
COPS3-215ENST00000578317 A8MU10 97 aa3.54□□□□□ -1.84
COPS3-215ENST00000578317 KRTAP19-8Q3LI54 63 aa3.54□□□□□ -1.84
COPS3-215ENST00000578317 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
COPS3-215ENST00000578317 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
COPS3-215ENST00000578317 PSPHP1O15172 72 aa3.52□□□□□ -1.85
COPS3-215ENST00000578317 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
COPS3-215ENST00000578317 UQCR11O14957 56 aa3.52□□□□□ -1.85
COPS3-215ENST00000578317 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
COPS3-215ENST00000578317 A6NN06 94 aa3.5□□□□□ -1.85
COPS3-215ENST00000578317 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
COPS3-215ENST00000578317 SPATA8Q6RVD6 105 aa3.49□□□□□ -1.85
COPS3-215ENST00000578317 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
COPS3-215ENST00000578317 MT1BP07438 61 aa3.48□□□□□ -1.85
COPS3-215ENST00000578317 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
COPS3-215ENST00000578317 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
COPS3-215ENST00000578317 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
COPS3-215ENST00000578317 PLAC4Q8WY50 150 aa3.44□□□□□ -1.86
COPS3-215ENST00000578317 A6NED7 52 aa3.43□□□□□ -1.86
COPS3-215ENST00000578317 A0A0D9SG42 100 aa3.42□□□□□ -1.86
COPS3-215ENST00000578317 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
COPS3-215ENST00000578317 KRTAP19-6Q3LI70 58 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms