RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 APOBP04114 4563 aaKnown RBP4.53□□□□□ -1.68
SKA2-203ENST00000578105 RYR2Q92736 4967 aa4.53□□□□□ -1.68
SKA2-203ENST00000578105 SPTSSBQ8NFR3 76 aa4.52□□□□□ -1.69
SKA2-203ENST00000578105 Q5VSD8 79 aa4.51□□□□□ -1.69
SKA2-203ENST00000578105 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
SKA2-203ENST00000578105 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
SKA2-203ENST00000578105 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
SKA2-203ENST00000578105 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
SKA2-203ENST00000578105 CDC42SE1Q9NRR8 79 aa4.48□□□□□ -1.69
SKA2-203ENST00000578105 A6NED7 52 aa4.47□□□□□ -1.69
SKA2-203ENST00000578105 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
SKA2-203ENST00000578105 A0A1B0GU69 56 aa4.45□□□□□ -1.7
SKA2-203ENST00000578105 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
SKA2-203ENST00000578105 SPINK7P58062 85 aa4.43□□□□□ -1.7
SKA2-203ENST00000578105 FAT1Q14517 4588 aa4.42□□□□□ -1.7
SKA2-203ENST00000578105 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
SKA2-203ENST00000578105 FLG2Q5D862 2391 aaPredicted RBP4.42□□□□□ -1.7
SKA2-203ENST00000578105 SEC61GP60059 68 aa4.41□□□□□ -1.7
SKA2-203ENST00000578105 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
SKA2-203ENST00000578105 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
SKA2-203ENST00000578105 COX6B2Q6YFQ2 88 aa4.4□□□□□ -1.71
SKA2-203ENST00000578105 UQCR11O14957 56 aa4.39□□□□□ -1.71
SKA2-203ENST00000578105 LCA10Q71F78 164 aa4.39□□□□□ -1.71
SKA2-203ENST00000578105 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
SKA2-203ENST00000578105 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
SKA2-203ENST00000578105 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
SKA2-203ENST00000578105 MT1HL1P0DM35 61 aa4.35□□□□□ -1.71
SKA2-203ENST00000578105 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
SKA2-203ENST00000578105 RYR1P21817 5038 aa4.35□□□□□ -1.71
SKA2-203ENST00000578105 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
SKA2-203ENST00000578105 HSPG2P98160 4391 aa4.33□□□□□ -1.72
SKA2-203ENST00000578105 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
SKA2-203ENST00000578105 MIR22HGQ0VDD5 57 aa4.32□□□□□ -1.72
SKA2-203ENST00000578105 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
SKA2-203ENST00000578105 TNXBP22105 4242 aa4.32□□□□□ -1.72
SKA2-203ENST00000578105 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
SKA2-203ENST00000578105 A6NN06 94 aa4.29□□□□□ -1.72
SKA2-203ENST00000578105 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
SKA2-203ENST00000578105 A8MU10 97 aa4.27□□□□□ -1.73
SKA2-203ENST00000578105 RYR3Q15413 4870 aa4.26□□□□□ -1.73
SKA2-203ENST00000578105 A0A1B0GU33 70 aa4.24□□□□□ -1.73
SKA2-203ENST00000578105 LRP1Q07954 4544 aaKnown RBP4.23□□□□□ -1.73
SKA2-203ENST00000578105 DMBT1Q9UGM3 2413 aaPredicted RBP4.23□□□□□ -1.73
SKA2-203ENST00000578105 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
SKA2-203ENST00000578105 RBM12B-AS1Q9P1G2 102 aa4.23□□□□□ -1.73
SKA2-203ENST00000578105 S4R3F8 94 aa4.23□□□□□ -1.73
SKA2-203ENST00000578105 SEC61BP60468 96 aaKnown RBP4.2□□□□□ -1.74
SKA2-203ENST00000578105 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
SKA2-203ENST00000578105 K7ERS5 55 aa4.17□□□□□ -1.74
SKA2-203ENST00000578105 H0YAA0 97 aa4.16□□□□□ -1.74
SKA2-203ENST00000578105 CSAG1Q6PB30 78 aa4.13□□□□□ -1.75
SKA2-203ENST00000578105 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
SKA2-203ENST00000578105 MYCBP2O75592 4640 aa4.11□□□□□ -1.75
SKA2-203ENST00000578105 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
SKA2-203ENST00000578105 M0QZ58 72 aa4.07□□□□□ -1.76
SKA2-203ENST00000578105 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
SKA2-203ENST00000578105 ADM2Q7Z4H4 148 aa4.02□□□□□ -1.77
SKA2-203ENST00000578105 P0C880 135 aa4□□□□□ -1.77
SKA2-203ENST00000578105 LRP2P98164 4655 aa3.99□□□□□ -1.77
SKA2-203ENST00000578105 HERC2O95714 4834 aa3.98□□□□□ -1.77
SKA2-203ENST00000578105 BIRC6Q9NR09 4857 aa3.98□□□□□ -1.77
SKA2-203ENST00000578105 ROMO1P60602 79 aa3.97□□□□□ -1.77
SKA2-203ENST00000578105 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
SKA2-203ENST00000578105 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
SKA2-203ENST00000578105 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
SKA2-203ENST00000578105 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
SKA2-203ENST00000578105 A0A0D9SG42 100 aa3.92□□□□□ -1.78
SKA2-203ENST00000578105 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
SKA2-203ENST00000578105 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
SKA2-203ENST00000578105 KRTAP19-2Q3LHN2 52 aa3.91□□□□□ -1.78
SKA2-203ENST00000578105 KRTAP4-1Q9BYQ7 146 aa3.91□□□□□ -1.78
SKA2-203ENST00000578105 R4GN34 69 aa3.91□□□□□ -1.78
SKA2-203ENST00000578105 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
SKA2-203ENST00000578105 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
SKA2-203ENST00000578105 LPAP08519 4548 aa3.89□□□□□ -1.79
SKA2-203ENST00000578105 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
SKA2-203ENST00000578105 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
SKA2-203ENST00000578105 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
SKA2-203ENST00000578105 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
SKA2-203ENST00000578105 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
SKA2-203ENST00000578105 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
SKA2-203ENST00000578105 HERC1Q15751 4861 aa3.76□□□□□ -1.81
SKA2-203ENST00000578105 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
SKA2-203ENST00000578105 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
SKA2-203ENST00000578105 PCLOQ9Y6V0 5065 aa3.71□□□□□ -1.82
SKA2-203ENST00000578105 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
SKA2-203ENST00000578105 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
SKA2-203ENST00000578105 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
SKA2-203ENST00000578105 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
SKA2-203ENST00000578105 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
SKA2-203ENST00000578105 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
SKA2-203ENST00000578105 M0R2T5 61 aa3.64□□□□□ -1.83
SKA2-203ENST00000578105 MT1HP80294 61 aa3.64□□□□□ -1.83
SKA2-203ENST00000578105 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
SKA2-203ENST00000578105 TNP1P09430 55 aa3.59□□□□□ -1.83
SKA2-203ENST00000578105 MT2AP02795 61 aa3.55□□□□□ -1.84
SKA2-203ENST00000578105 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
SKA2-203ENST00000578105 KRTAP19-8Q3LI54 63 aa3.54□□□□□ -1.84
SKA2-203ENST00000578105 MUC2Q02817 5179 aa3.53□□□□□ -1.84
SKA2-203ENST00000578105 MT1FP04733 61 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms