RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 LRP2P98164 4655 aa4.67□□□□□ -1.66
PRPF8-213ENST00000576407 XP32Q5T750 250 aa4.66□□□□□ -1.66
PRPF8-213ENST00000576407 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
PRPF8-213ENST00000576407 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
PRPF8-213ENST00000576407 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
PRPF8-213ENST00000576407 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
PRPF8-213ENST00000576407 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
PRPF8-213ENST00000576407 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
PRPF8-213ENST00000576407 ACYP2P14621 99 aa4.61□□□□□ -1.67
PRPF8-213ENST00000576407 HRES1P13985 223 aa4.6□□□□□ -1.67
PRPF8-213ENST00000576407 SPINK7P58062 85 aa4.6□□□□□ -1.67
PRPF8-213ENST00000576407 RPL37P61927 97 aaKnown RBP4.59□□□□□ -1.67
PRPF8-213ENST00000576407 C20orf166-AS1Q96NR2 134 aa4.59□□□□□ -1.67
PRPF8-213ENST00000576407 A8MUU9 505 aa4.58□□□□□ -1.68
PRPF8-213ENST00000576407 UQCR11O14957 56 aa4.58□□□□□ -1.68
PRPF8-213ENST00000576407 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
PRPF8-213ENST00000576407 SEC61BP60468 96 aaKnown RBP4.57□□□□□ -1.68
PRPF8-213ENST00000576407 MRPL34Q9BQ48 92 aaKnown RBP4.56□□□□□ -1.68
PRPF8-213ENST00000576407 PCOTHQ58A44 107 aa4.55□□□□□ -1.68
PRPF8-213ENST00000576407 A0A1B0GU69 56 aa4.54□□□□□ -1.68
PRPF8-213ENST00000576407 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
PRPF8-213ENST00000576407 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
PRPF8-213ENST00000576407 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
PRPF8-213ENST00000576407 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
PRPF8-213ENST00000576407 MUC2Q02817 5179 aa4.49□□□□□ -1.69
PRPF8-213ENST00000576407 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
PRPF8-213ENST00000576407 Q5W150 140 aa4.46□□□□□ -1.7
PRPF8-213ENST00000576407 CSAG1Q6PB30 78 aa4.42□□□□□ -1.7
PRPF8-213ENST00000576407 ROMO1P60602 79 aa4.41□□□□□ -1.7
PRPF8-213ENST00000576407 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
PRPF8-213ENST00000576407 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
PRPF8-213ENST00000576407 IGKV2D-30A0A075B6S6 120 aa4.38□□□□□ -1.71
PRPF8-213ENST00000576407 IGKV2-30P06310 120 aa4.38□□□□□ -1.71
PRPF8-213ENST00000576407 KRTAP9-2Q9BYQ4 174 aa4.36□□□□□ -1.71
PRPF8-213ENST00000576407 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
PRPF8-213ENST00000576407 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.72
PRPF8-213ENST00000576407 K7ERS5 55 aa4.33□□□□□ -1.72
PRPF8-213ENST00000576407 COX6B2Q6YFQ2 88 aa4.32□□□□□ -1.72
PRPF8-213ENST00000576407 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
PRPF8-213ENST00000576407 MT1HP80294 61 aa4.25□□□□□ -1.73
PRPF8-213ENST00000576407 KRTAP3-1Q9BYR8 98 aa4.23□□□□□ -1.73
PRPF8-213ENST00000576407 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
PRPF8-213ENST00000576407 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
PRPF8-213ENST00000576407 M0R2T5 61 aa4.19□□□□□ -1.74
PRPF8-213ENST00000576407 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
PRPF8-213ENST00000576407 A0A1B0GU33 70 aa4.18□□□□□ -1.74
PRPF8-213ENST00000576407 H0YAA0 97 aa4.18□□□□□ -1.74
PRPF8-213ENST00000576407 S4R3F8 94 aa4.14□□□□□ -1.75
PRPF8-213ENST00000576407 P0C880 135 aa4.13□□□□□ -1.75
PRPF8-213ENST00000576407 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
PRPF8-213ENST00000576407 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
PRPF8-213ENST00000576407 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
PRPF8-213ENST00000576407 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
PRPF8-213ENST00000576407 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
PRPF8-213ENST00000576407 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
PRPF8-213ENST00000576407 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
PRPF8-213ENST00000576407 MT2AP02795 61 aa4.03□□□□□ -1.76
PRPF8-213ENST00000576407 CRIPTQ9P021 101 aa4.01□□□□□ -1.77
PRPF8-213ENST00000576407 MT1FP04733 61 aa4□□□□□ -1.77
PRPF8-213ENST00000576407 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
PRPF8-213ENST00000576407 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
PRPF8-213ENST00000576407 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
PRPF8-213ENST00000576407 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
PRPF8-213ENST00000576407 KRTAP19-4Q3LI73 84 aa3.9□□□□□ -1.79
PRPF8-213ENST00000576407 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
PRPF8-213ENST00000576407 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
PRPF8-213ENST00000576407 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
PRPF8-213ENST00000576407 M0QZ58 72 aa3.82□□□□□ -1.8
PRPF8-213ENST00000576407 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
PRPF8-213ENST00000576407 USH2AO75445 5202 aa3.81□□□□□ -1.8
PRPF8-213ENST00000576407 R4GN34 69 aa3.8□□□□□ -1.8
PRPF8-213ENST00000576407 KRTAP19-8Q3LI54 63 aa3.77□□□□□ -1.81
PRPF8-213ENST00000576407 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
PRPF8-213ENST00000576407 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
PRPF8-213ENST00000576407 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
PRPF8-213ENST00000576407 MT1BP07438 61 aa3.74□□□□□ -1.81
PRPF8-213ENST00000576407 KRTAP13-4Q3LI77 160 aa3.73□□□□□ -1.81
PRPF8-213ENST00000576407 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
PRPF8-213ENST00000576407 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
PRPF8-213ENST00000576407 KRTAP12-1P59990 96 aa3.72□□□□□ -1.81
PRPF8-213ENST00000576407 A0A0D9SG42 100 aa3.71□□□□□ -1.82
PRPF8-213ENST00000576407 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
PRPF8-213ENST00000576407 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
PRPF8-213ENST00000576407 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
PRPF8-213ENST00000576407 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
PRPF8-213ENST00000576407 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
PRPF8-213ENST00000576407 MT1XP80297 61 aa3.57□□□□□ -1.84
PRPF8-213ENST00000576407 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
PRPF8-213ENST00000576407 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
PRPF8-213ENST00000576407 INE1O15225 51 aa3.53□□□□□ -1.84
PRPF8-213ENST00000576407 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
PRPF8-213ENST00000576407 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
PRPF8-213ENST00000576407 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
PRPF8-213ENST00000576407 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
PRPF8-213ENST00000576407 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
PRPF8-213ENST00000576407 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
PRPF8-213ENST00000576407 TNP1P09430 55 aa3.37□□□□□ -1.87
PRPF8-213ENST00000576407 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
PRPF8-213ENST00000576407 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
PRPF8-213ENST00000576407 KMT2DO14686 5537 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms