RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 IGSF10Q6WRI0 2623 aa1.76□□□□□ -2.13
TOM1L1-222ENST00000575909 DMXL2Q8TDJ6 3036 aa1.76□□□□□ -2.13
TOM1L1-222ENST00000575909 POLQO75417 2590 aa1.76□□□□□ -2.13
TOM1L1-222ENST00000575909 SPENQ96T58 3664 aaKnown RBP1.75□□□□□ -2.13
TOM1L1-222ENST00000575909 PTPN13Q12923 2485 aa1.75□□□□□ -2.13
TOM1L1-222ENST00000575909 ANKHD1Q8IWZ3 2542 aaKnown RBP1.75□□□□□ -2.13
TOM1L1-222ENST00000575909 SACSQ9NZJ4 4579 aa1.74□□□□□ -2.13
TOM1L1-222ENST00000575909 LOC400499M0QZD8 3231 aa1.74□□□□□ -2.13
TOM1L1-222ENST00000575909 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
TOM1L1-222ENST00000575909 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
TOM1L1-222ENST00000575909 DCHS2Q6V1P9 2916 aa1.73□□□□□ -2.13
TOM1L1-222ENST00000575909 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
TOM1L1-222ENST00000575909 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
TOM1L1-222ENST00000575909 KRTAP2-1Q9BYU5 128 aa1.73□□□□□ -2.13
TOM1L1-222ENST00000575909 ATRQ13535 2644 aa1.72□□□□□ -2.13
TOM1L1-222ENST00000575909 FLNCQ14315 2725 aa1.72□□□□□ -2.13
TOM1L1-222ENST00000575909 ITPR2Q14571 2701 aa1.72□□□□□ -2.13
TOM1L1-222ENST00000575909 NF1P21359 2839 aa1.72□□□□□ -2.13
TOM1L1-222ENST00000575909 NIPBLQ6KC79 2804 aaeCLIP1.72□□□□□ -2.13
TOM1L1-222ENST00000575909 LRRK2Q5S007 2527 aa1.71□□□□□ -2.14
TOM1L1-222ENST00000575909 CELSR3Q9NYQ7 3312 aa1.71□□□□□ -2.14
TOM1L1-222ENST00000575909 USP9YO00507 2555 aaPredicted RBP1.7□□□□□ -2.14
TOM1L1-222ENST00000575909 APCP25054 2843 aa1.7□□□□□ -2.14
TOM1L1-222ENST00000575909 MYCBP2O75592 4640 aa1.7□□□□□ -2.14
TOM1L1-222ENST00000575909 HTN3P15516 51 aa1.7□□□□□ -2.14
TOM1L1-222ENST00000575909 VPS13CQ709C8 3753 aa1.7□□□□□ -2.14
TOM1L1-222ENST00000575909 SPG11Q96JI7 2443 aa1.7□□□□□ -2.14
TOM1L1-222ENST00000575909 PDZD2O15018 2839 aa1.69□□□□□ -2.14
TOM1L1-222ENST00000575909 ATMQ13315 3056 aa1.68□□□□□ -2.14
TOM1L1-222ENST00000575909 FBN3Q75N90 2809 aa1.68□□□□□ -2.14
TOM1L1-222ENST00000575909 HIVEP3Q5T1R4 2406 aa1.67□□□□□ -2.14
TOM1L1-222ENST00000575909 MTORP42345 2549 aa1.67□□□□□ -2.14
TOM1L1-222ENST00000575909 BOD1L1Q8NFC6 3051 aa1.67□□□□□ -2.14
TOM1L1-222ENST00000575909 CSMD1Q96PZ7 3565 aa1.67□□□□□ -2.14
TOM1L1-222ENST00000575909 COL7A1Q02388 2944 aa1.67□□□□□ -2.14
TOM1L1-222ENST00000575909 PRKDCP78527 4128 aaKnown RBP1.66□□□□□ -2.14
TOM1L1-222ENST00000575909 PKD1L1Q8TDX9 2849 aa1.66□□□□□ -2.14
TOM1L1-222ENST00000575909 TACC2O95359 2948 aa1.66□□□□□ -2.14
TOM1L1-222ENST00000575909 KRTAP8-1Q8IUC2 63 aa1.66□□□□□ -2.14
TOM1L1-222ENST00000575909 NBEAL1Q6ZS30 2694 aa1.66□□□□□ -2.14
TOM1L1-222ENST00000575909 DYNC2H1Q8NCM8 4307 aaKnown RBP1.65□□□□□ -2.14
TOM1L1-222ENST00000575909 LYSTQ99698 3801 aa1.65□□□□□ -2.14
TOM1L1-222ENST00000575909 FBN2P35556 2912 aa1.65□□□□□ -2.14
TOM1L1-222ENST00000575909 U3KQA8 63 aa1.65□□□□□ -2.15
TOM1L1-222ENST00000575909 DNAH8Q96JB1 4490 aa1.65□□□□□ -2.15
TOM1L1-222ENST00000575909 NOTCH1P46531 2555 aa1.65□□□□□ -2.15
TOM1L1-222ENST00000575909 TLN1Q9Y490 2541 aaKnown RBP1.64□□□□□ -2.15
TOM1L1-222ENST00000575909 SONP18583 2426 aaKnown RBP1.64□□□□□ -2.15
TOM1L1-222ENST00000575909 CSMD2Q7Z408 3487 aa1.64□□□□□ -2.15
TOM1L1-222ENST00000575909 CSMD3Q7Z407 3707 aa1.64□□□□□ -2.15
TOM1L1-222ENST00000575909 VPS13BQ7Z7G8 4022 aa1.64□□□□□ -2.15
TOM1L1-222ENST00000575909 BSNQ9UPA5 3926 aa1.64□□□□□ -2.15
TOM1L1-222ENST00000575909 TENM1Q9UKZ4 2725 aa1.63□□□□□ -2.15
TOM1L1-222ENST00000575909 SMR3AQ99954 134 aa1.63□□□□□ -2.15
TOM1L1-222ENST00000575909 ACANP16112 2415 aa1.63□□□□□ -2.15
TOM1L1-222ENST00000575909 DNAH3Q8TD57 4116 aa1.63□□□□□ -2.15
TOM1L1-222ENST00000575909 STAB1Q9NY15 2570 aa1.62□□□□□ -2.15
TOM1L1-222ENST00000575909 TGP01266 2768 aa1.62□□□□□ -2.15
TOM1L1-222ENST00000575909 KMT2AQ03164 3969 aa1.61□□□□□ -2.15
TOM1L1-222ENST00000575909 ADGRG4Q8IZF6 3080 aa1.6□□□□□ -2.15
TOM1L1-222ENST00000575909 ZNF469Q96JG9 3925 aaPredicted RBP1.6□□□□□ -2.15
TOM1L1-222ENST00000575909 TLN2Q9Y4G6 2542 aa1.59□□□□□ -2.16
TOM1L1-222ENST00000575909 DNAH7Q8WXX0 4024 aa1.58□□□□□ -2.16
TOM1L1-222ENST00000575909 HIVEP1P15822 2718 aa1.58□□□□□ -2.16
TOM1L1-222ENST00000575909 CUBNO60494 3623 aa1.57□□□□□ -2.16
TOM1L1-222ENST00000575909 NBEAL2Q6ZNJ1 2754 aa1.57□□□□□ -2.16
TOM1L1-222ENST00000575909 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
TOM1L1-222ENST00000575909 FLGP20930 4061 aaPredicted RBP1.56□□□□□ -2.16
TOM1L1-222ENST00000575909 MXRA5Q9NR99 2828 aa1.56□□□□□ -2.16
TOM1L1-222ENST00000575909 NSD1Q96L73 2696 aaPredicted RBP1.55□□□□□ -2.16
TOM1L1-222ENST00000575909 ZANQ9Y493 2812 aa1.55□□□□□ -2.16
TOM1L1-222ENST00000575909 DEFB4AO15263 64 aa1.55□□□□□ -2.16
TOM1L1-222ENST00000575909 KRTAP4-1Q9BYQ7 146 aa1.55□□□□□ -2.16
TOM1L1-222ENST00000575909 ANK3Q12955 4377 aaKnown RBP1.54□□□□□ -2.16
TOM1L1-222ENST00000575909 FRAS1Q86XX4 4008 aa1.54□□□□□ -2.16
TOM1L1-222ENST00000575909 FLNAP21333 2647 aaKnown RBP1.53□□□□□ -2.16
TOM1L1-222ENST00000575909 DNAH10Q8IVF4 4471 aa1.53□□□□□ -2.16
TOM1L1-222ENST00000575909 DNAH1Q9P2D7 4330 aa1.53□□□□□ -2.16
TOM1L1-222ENST00000575909 MGAM2Q2M2H8 2515 aa1.52□□□□□ -2.17
TOM1L1-222ENST00000575909 ANK2Q01484 3957 aa1.52□□□□□ -2.17
TOM1L1-222ENST00000575909 CMYA5Q8N3K9 4069 aa1.51□□□□□ -2.17
TOM1L1-222ENST00000575909 HRNRQ86YZ3 2850 aaPredicted RBP1.51□□□□□ -2.17
TOM1L1-222ENST00000575909 DNHD1Q96M86 4753 aa1.5□□□□□ -2.17
TOM1L1-222ENST00000575909 SVEP1Q4LDE5 3571 aa1.5□□□□□ -2.17
TOM1L1-222ENST00000575909 FAT2Q9NYQ8 4349 aa1.49□□□□□ -2.17
TOM1L1-222ENST00000575909 PKHD1L1Q86WI1 4243 aa1.48□□□□□ -2.17
TOM1L1-222ENST00000575909 PKD1P98161 4303 aa1.48□□□□□ -2.17
TOM1L1-222ENST00000575909 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
TOM1L1-222ENST00000575909 TRRAPQ9Y4A5 3859 aa1.47□□□□□ -2.17
TOM1L1-222ENST00000575909 HECTD4Q9Y4D8 3996 aa1.47□□□□□ -2.17
TOM1L1-222ENST00000575909 HSPG2P98160 4391 aa1.46□□□□□ -2.18
TOM1L1-222ENST00000575909 TNXBP22105 4242 aa1.46□□□□□ -2.18
TOM1L1-222ENST00000575909 SMR3BP02814 79 aaPredicted RBP1.45□□□□□ -2.18
TOM1L1-222ENST00000575909 PRM1P04553 51 aa1.45□□□□□ -2.18
TOM1L1-222ENST00000575909 HUWE1Q7Z6Z7 4374 aaKnown RBP1.45□□□□□ -2.18
TOM1L1-222ENST00000575909 FAT3Q8TDW7 4589 aa1.44□□□□□ -2.18
TOM1L1-222ENST00000575909 DNAH9Q9NYC9 4486 aa1.44□□□□□ -2.18
TOM1L1-222ENST00000575909 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
TOM1L1-222ENST00000575909 RYR1P21817 5038 aa1.42□□□□□ -2.18
TOM1L1-222ENST00000575909 DNAH6Q9C0G6 4158 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms