RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-222ENST00000575909 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
TOM1L1-222ENST00000575909 AEBP2Q6ZN18 517 aaPredicted RBP26.02■■□□□ 1.76
TOM1L1-222ENST00000575909 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
TOM1L1-222ENST00000575909 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
TOM1L1-222ENST00000575909 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
TOM1L1-222ENST00000575909 FOXD1Q16676 465 aa20.33■□□□□ 0.85
TOM1L1-222ENST00000575909 ADRA2BP18089 450 aa20.09■□□□□ 0.81
TOM1L1-222ENST00000575909 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
TOM1L1-222ENST00000575909 PIAS4Q8N2W9 510 aaPredicted RBP19.34■□□□□ 0.69
TOM1L1-222ENST00000575909 KCNA4P22459 653 aa19.33■□□□□ 0.68
TOM1L1-222ENST00000575909 PPP4R3CPQ6ZMV5 832 aa19.03■□□□□ 0.64
TOM1L1-222ENST00000575909 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
TOM1L1-222ENST00000575909 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
TOM1L1-222ENST00000575909 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
TOM1L1-222ENST00000575909 MSH5O43196 834 aa18.53■□□□□ 0.56
TOM1L1-222ENST00000575909 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
TOM1L1-222ENST00000575909 NPM3O75607 178 aaKnown RBP18.45■□□□□ 0.54
TOM1L1-222ENST00000575909 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
TOM1L1-222ENST00000575909 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
TOM1L1-222ENST00000575909 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
TOM1L1-222ENST00000575909 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
TOM1L1-222ENST00000575909 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
TOM1L1-222ENST00000575909 ZBTB22O15209 634 aa17.79■□□□□ 0.44
TOM1L1-222ENST00000575909 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
TOM1L1-222ENST00000575909 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
TOM1L1-222ENST00000575909 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
TOM1L1-222ENST00000575909 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
TOM1L1-222ENST00000575909 POTEDQ86YR6 584 aa17.09■□□□□ 0.33
TOM1L1-222ENST00000575909 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
TOM1L1-222ENST00000575909 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
TOM1L1-222ENST00000575909 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
TOM1L1-222ENST00000575909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.279e-8■□□□□ 10.2
TOM1L1-222ENST00000575909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
TOM1L1-222ENST00000575909 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
TOM1L1-222ENST00000575909 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
TOM1L1-222ENST00000575909 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
TOM1L1-222ENST00000575909 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
TOM1L1-222ENST00000575909 FKBP8Q14318 412 aa16.46■□□□□ 0.23
TOM1L1-222ENST00000575909 APLP2Q06481 763 aa16.32■□□□□ 0.2
TOM1L1-222ENST00000575909 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
TOM1L1-222ENST00000575909 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
TOM1L1-222ENST00000575909 RTN4Q9NQC3 1192 aaKnown RBP16.15■□□□□ 0.18
TOM1L1-222ENST00000575909 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
TOM1L1-222ENST00000575909 TRHP20396 242 aaPredicted RBP15.87■□□□□ 0.13
TOM1L1-222ENST00000575909 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
TOM1L1-222ENST00000575909 SPDYE4A6NLX3 237 aa15.83■□□□□ 0.12
TOM1L1-222ENST00000575909 MKRN4PQ13434 485 aaPredicted RBP15.83■□□□□ 0.12
TOM1L1-222ENST00000575909 FBLN2P98095 1184 aa15.82■□□□□ 0.12
TOM1L1-222ENST00000575909 C1QBPQ07021 282 aaKnown RBP15.8■□□□□ 0.12
TOM1L1-222ENST00000575909 CAPN15O75808 1086 aa15.79■□□□□ 0.12
TOM1L1-222ENST00000575909 POLA2Q14181 598 aa15.79■□□□□ 0.12
TOM1L1-222ENST00000575909 FBXO3Q9UK99 471 aa15.77■□□□□ 0.12
TOM1L1-222ENST00000575909 SLC24A1O60721 1099 aa15.72■□□□□ 0.11
TOM1L1-222ENST00000575909 PROM2Q8N271 834 aa15.68■□□□□ 0.1
TOM1L1-222ENST00000575909 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
TOM1L1-222ENST00000575909 ABCB7O75027 752 aa15.52■□□□□ 0.08
TOM1L1-222ENST00000575909 VASPP50552 380 aaPredicted RBP15.48■□□□□ 0.07
TOM1L1-222ENST00000575909 DSG3P32926 999 aa15.37■□□□□ 0.05
TOM1L1-222ENST00000575909 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
TOM1L1-222ENST00000575909 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
TOM1L1-222ENST00000575909 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
TOM1L1-222ENST00000575909 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
TOM1L1-222ENST00000575909 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
TOM1L1-222ENST00000575909 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
TOM1L1-222ENST00000575909 SSUH2Q9Y2M2 353 aa15.18■□□□□ 0.02
TOM1L1-222ENST00000575909 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
TOM1L1-222ENST00000575909 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
TOM1L1-222ENST00000575909 PKD2Q13563 968 aa15.06■□□□□ 0
TOM1L1-222ENST00000575909 KLHL34Q8N239 644 aa15.06■□□□□ 0
TOM1L1-222ENST00000575909 SPOCK2Q92563 424 aa15.05■□□□□ -0
TOM1L1-222ENST00000575909 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
TOM1L1-222ENST00000575909 PLCD3Q8N3E9 789 aa15□□□□□ -0.01
TOM1L1-222ENST00000575909 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
TOM1L1-222ENST00000575909 PLCB2Q00722 1185 aa14.96□□□□□ -0.01
TOM1L1-222ENST00000575909 MIER1Q8N108 512 aa14.94□□□□□ -0.02
TOM1L1-222ENST00000575909 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
TOM1L1-222ENST00000575909 PLEKHG5O94827 1062 aa14.85□□□□□ -0.03
TOM1L1-222ENST00000575909 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
TOM1L1-222ENST00000575909 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
TOM1L1-222ENST00000575909 BBXQ8WY36 941 aaPredicted RBP14.7□□□□□ -0.06
TOM1L1-222ENST00000575909 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.69□□□□□ -0.06
TOM1L1-222ENST00000575909 RGL2O15211 777 aa14.67□□□□□ -0.06
TOM1L1-222ENST00000575909 RBM42Q9BTD8 480 aaKnown RBP14.67□□□□□ -0.06
TOM1L1-222ENST00000575909 CIZ1Q9ULV3 898 aaPredicted RBP14.67□□□□□ -0.06
TOM1L1-222ENST00000575909 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
TOM1L1-222ENST00000575909 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
TOM1L1-222ENST00000575909 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
TOM1L1-222ENST00000575909 AKT1S1Q96B36 256 aa14.62□□□□□ -0.07
TOM1L1-222ENST00000575909 VSIG10Q8N0Z9 540 aa14.57□□□□□ -0.08
TOM1L1-222ENST00000575909 GSE1Q14687 1217 aa14.54□□□□□ -0.08
TOM1L1-222ENST00000575909 PAXIP1Q6ZW49 1069 aaPredicted RBP14.52□□□□□ -0.09
TOM1L1-222ENST00000575909 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
TOM1L1-222ENST00000575909 NUBP1P53384 320 aa14.48□□□□□ -0.09
TOM1L1-222ENST00000575909 CFAP44Q96MT7 982 aa14.48□□□□□ -0.09
TOM1L1-222ENST00000575909 CLEC11AQ9Y240 323 aa14.48□□□□□ -0.09
TOM1L1-222ENST00000575909 CHGAP10645 457 aaKnown RBP14.47□□□□□ -0.09
TOM1L1-222ENST00000575909 REM2Q8IYK8 340 aaPredicted RBP14.46□□□□□ -0.09
TOM1L1-222ENST00000575909 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.09
TOM1L1-222ENST00000575909 CREBZFQ9NS37 354 aa14.43□□□□□ -0.1
TOM1L1-222ENST00000575909 DCAF8Q5TAQ9 597 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms