RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
NCBP3-205ENST00000575815 Q5VV11 94 aa4.36□□□□□ -1.71
NCBP3-205ENST00000575815 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
NCBP3-205ENST00000575815 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
NCBP3-205ENST00000575815 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
NCBP3-205ENST00000575815 KRTAP17-1Q9BYP8 105 aa4.35□□□□□ -1.71
NCBP3-205ENST00000575815 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.72
NCBP3-205ENST00000575815 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
NCBP3-205ENST00000575815 FRAS1Q86XX4 4008 aa4.33□□□□□ -1.72
NCBP3-205ENST00000575815 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
NCBP3-205ENST00000575815 ADM2Q7Z4H4 148 aa4.32□□□□□ -1.72
NCBP3-205ENST00000575815 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
NCBP3-205ENST00000575815 R4GN34 69 aa4.31□□□□□ -1.72
NCBP3-205ENST00000575815 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
NCBP3-205ENST00000575815 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
NCBP3-205ENST00000575815 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
NCBP3-205ENST00000575815 M0QZ58 72 aa4.26□□□□□ -1.73
NCBP3-205ENST00000575815 A6NN06 94 aa4.26□□□□□ -1.73
NCBP3-205ENST00000575815 EPPK1P58107 5090 aaKnown RBP4.23□□□□□ -1.73
NCBP3-205ENST00000575815 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
NCBP3-205ENST00000575815 HERC2O95714 4834 aa4.22□□□□□ -1.73
NCBP3-205ENST00000575815 KRTAP3-1Q9BYR8 98 aa4.21□□□□□ -1.74
NCBP3-205ENST00000575815 PKD1P98161 4303 aa4.21□□□□□ -1.74
NCBP3-205ENST00000575815 HSPG2P98160 4391 aa4.17□□□□□ -1.74
NCBP3-205ENST00000575815 P0C880 135 aa4.15□□□□□ -1.75
NCBP3-205ENST00000575815 CRIPTQ9P021 101 aa4.14□□□□□ -1.75
NCBP3-205ENST00000575815 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
NCBP3-205ENST00000575815 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
NCBP3-205ENST00000575815 LRP2P98164 4655 aa4.1□□□□□ -1.75
NCBP3-205ENST00000575815 KRTAP10-10P60014 251 aa4.09□□□□□ -1.76
NCBP3-205ENST00000575815 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
NCBP3-205ENST00000575815 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
NCBP3-205ENST00000575815 H0YAA0 97 aa4.04□□□□□ -1.76
NCBP3-205ENST00000575815 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
NCBP3-205ENST00000575815 ROMO1P60602 79 aa4.03□□□□□ -1.76
NCBP3-205ENST00000575815 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
NCBP3-205ENST00000575815 LPAP08519 4548 aa3.97□□□□□ -1.77
NCBP3-205ENST00000575815 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
NCBP3-205ENST00000575815 HERC1Q15751 4861 aa3.93□□□□□ -1.78
NCBP3-205ENST00000575815 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
NCBP3-205ENST00000575815 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
NCBP3-205ENST00000575815 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.78
NCBP3-205ENST00000575815 KRTAP3-2Q9BYR7 98 aa3.89□□□□□ -1.79
NCBP3-205ENST00000575815 PCLOQ9Y6V0 5065 aa3.88□□□□□ -1.79
NCBP3-205ENST00000575815 KRTAP12-2P59991 146 aa3.87□□□□□ -1.79
NCBP3-205ENST00000575815 TNXBP22105 4242 aa3.87□□□□□ -1.79
NCBP3-205ENST00000575815 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.79
NCBP3-205ENST00000575815 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
NCBP3-205ENST00000575815 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
NCBP3-205ENST00000575815 RNF213Q63HN8 5207 aa3.82□□□□□ -1.8
NCBP3-205ENST00000575815 MUC2Q02817 5179 aa3.81□□□□□ -1.8
NCBP3-205ENST00000575815 TNP1P09430 55 aa3.81□□□□□ -1.8
NCBP3-205ENST00000575815 MT1HP80294 61 aa3.78□□□□□ -1.8
NCBP3-205ENST00000575815 UBR4Q5T4S7 5183 aa3.78□□□□□ -1.8
NCBP3-205ENST00000575815 PRO2289Q9P1D8 64 aa3.7□□□□□ -1.82
NCBP3-205ENST00000575815 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
NCBP3-205ENST00000575815 MT2AP02795 61 aa3.68□□□□□ -1.82
NCBP3-205ENST00000575815 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
NCBP3-205ENST00000575815 MT1FP04733 61 aa3.66□□□□□ -1.82
NCBP3-205ENST00000575815 LCE2CQ5TA81 110 aa3.65□□□□□ -1.82
NCBP3-205ENST00000575815 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.83
NCBP3-205ENST00000575815 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
NCBP3-205ENST00000575815 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
NCBP3-205ENST00000575815 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
NCBP3-205ENST00000575815 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
NCBP3-205ENST00000575815 KRTAP9-8Q9BYQ0 159 aa3.54□□□□□ -1.84
NCBP3-205ENST00000575815 KRTAP19-1Q8IUB9 90 aa3.52□□□□□ -1.85
NCBP3-205ENST00000575815 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
NCBP3-205ENST00000575815 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
NCBP3-205ENST00000575815 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
NCBP3-205ENST00000575815 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
NCBP3-205ENST00000575815 KRTAP9-3Q9BYQ3 159 aa3.41□□□□□ -1.86
NCBP3-205ENST00000575815 LCE3AQ5TA76 89 aa3.4□□□□□ -1.86
NCBP3-205ENST00000575815 MT1BP07438 61 aa3.38□□□□□ -1.87
NCBP3-205ENST00000575815 KRTAP19-8Q3LI54 63 aa3.37□□□□□ -1.87
NCBP3-205ENST00000575815 LCE2AQ5TA79 106 aaPredicted RBP3.36□□□□□ -1.87
NCBP3-205ENST00000575815 LCE2BO14633 110 aa3.35□□□□□ -1.87
NCBP3-205ENST00000575815 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
NCBP3-205ENST00000575815 MT1XP80297 61 aa3.3□□□□□ -1.88
NCBP3-205ENST00000575815 USH2AO75445 5202 aa3.3□□□□□ -1.88
NCBP3-205ENST00000575815 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
NCBP3-205ENST00000575815 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
NCBP3-205ENST00000575815 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
NCBP3-205ENST00000575815 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
NCBP3-205ENST00000575815 KRTAP4-8Q9BYQ9 185 aa3.23□□□□□ -1.89
NCBP3-205ENST00000575815 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
NCBP3-205ENST00000575815 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
NCBP3-205ENST00000575815 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
NCBP3-205ENST00000575815 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
NCBP3-205ENST00000575815 INE1O15225 51 aa3.14□□□□□ -1.91
NCBP3-205ENST00000575815 KMT2DO14686 5537 aa3.07□□□□□ -1.92
NCBP3-205ENST00000575815 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
NCBP3-205ENST00000575815 LCE2DQ5TA82 110 aaPredicted RBP3.05□□□□□ -1.92
NCBP3-205ENST00000575815 SSPOA2VEC9 5147 aa3.01□□□□□ -1.93
NCBP3-205ENST00000575815 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
NCBP3-205ENST00000575815 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
NCBP3-205ENST00000575815 KRTAP4-7Q9BYR0 210 aa2.97□□□□□ -1.93
NCBP3-205ENST00000575815 SPRR2EP22531 72 aa2.96□□□□□ -1.94
NCBP3-205ENST00000575815 SPRR2BP35325 72 aa2.96□□□□□ -1.94
NCBP3-205ENST00000575815 SPRR2AP35326 72 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms