RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 LCE2CQ5TA81 110 aa10.57□□□□□ -0.72
CXCL16-203ENST00000574412 SMIM26A0A096LP01 95 aa10.5□□□□□ -0.73
CXCL16-203ENST00000574412 H1FX-AS1Q4G0G2 97 aa10.5□□□□□ -0.73
CXCL16-203ENST00000574412 FLGP20930 4061 aaPredicted RBP10.43□□□□□ -0.74
CXCL16-203ENST00000574412 S4R3F8 94 aa10.41□□□□□ -0.74
CXCL16-203ENST00000574412 MT1HP80294 61 aa10.38□□□□□ -0.75
CXCL16-203ENST00000574412 LCA10Q71F78 164 aa10.38□□□□□ -0.75
CXCL16-203ENST00000574412 SPTSSBQ8NFR3 76 aa10.35□□□□□ -0.75
CXCL16-203ENST00000574412 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
CXCL16-203ENST00000574412 Q1T7F1 81 aa10.32□□□□□ -0.76
CXCL16-203ENST00000574412 M0R2T5 61 aa10.3□□□□□ -0.76
CXCL16-203ENST00000574412 V9GYY9 64 aa10.28□□□□□ -0.76
CXCL16-203ENST00000574412 LINC01558Q9Y6Z2 57 aa10.27□□□□□ -0.77
CXCL16-203ENST00000574412 LCE2AQ5TA79 106 aaPredicted RBP10.21□□□□□ -0.78
CXCL16-203ENST00000574412 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
CXCL16-203ENST00000574412 PSPHP1O15172 72 aa10.15□□□□□ -0.78
CXCL16-203ENST00000574412 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
CXCL16-203ENST00000574412 A0A1B0GU69 56 aa10.12□□□□□ -0.79
CXCL16-203ENST00000574412 Q5VV11 94 aa10.07□□□□□ -0.8
CXCL16-203ENST00000574412 SEC61GP60059 68 aa10.06□□□□□ -0.8
CXCL16-203ENST00000574412 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
CXCL16-203ENST00000574412 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
CXCL16-203ENST00000574412 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
CXCL16-203ENST00000574412 PRO0628Q9UI54 55 aa9.96□□□□□ -0.81
CXCL16-203ENST00000574412 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
CXCL16-203ENST00000574412 KRTAP9-8Q9BYQ0 159 aa9.94□□□□□ -0.82
CXCL16-203ENST00000574412 H0YAA0 97 aa9.93□□□□□ -0.82
CXCL16-203ENST00000574412 MT2AP02795 61 aa9.9□□□□□ -0.83
CXCL16-203ENST00000574412 P0C880 135 aa9.89□□□□□ -0.83
CXCL16-203ENST00000574412 MT1FP04733 61 aa9.84□□□□□ -0.83
CXCL16-203ENST00000574412 A0A1B0GU33 70 aa9.83□□□□□ -0.84
CXCL16-203ENST00000574412 A6NED7 52 aa9.83□□□□□ -0.84
CXCL16-203ENST00000574412 KRTAP10-10P60014 251 aa9.82□□□□□ -0.84
CXCL16-203ENST00000574412 UQCR11O14957 56 aa9.8□□□□□ -0.84
CXCL16-203ENST00000574412 MIR22HGQ0VDD5 57 aa9.69□□□□□ -0.86
CXCL16-203ENST00000574412 SPATA8Q6RVD6 105 aa9.68□□□□□ -0.86
CXCL16-203ENST00000574412 BRK1Q8WUW1 75 aa9.68□□□□□ -0.86
CXCL16-203ENST00000574412 KRTAP13-4Q3LI77 160 aa9.67□□□□□ -0.86
CXCL16-203ENST00000574412 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
CXCL16-203ENST00000574412 A8MU10 97 aa9.64□□□□□ -0.87
CXCL16-203ENST00000574412 M0QZ58 72 aa9.6□□□□□ -0.87
CXCL16-203ENST00000574412 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
CXCL16-203ENST00000574412 R4GN34 69 aa9.58□□□□□ -0.88
CXCL16-203ENST00000574412 CRIPTQ9P021 101 aa9.53□□□□□ -0.88
CXCL16-203ENST00000574412 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
CXCL16-203ENST00000574412 A0A0D9SG42 100 aa9.48□□□□□ -0.89
CXCL16-203ENST00000574412 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.89
CXCL16-203ENST00000574412 LINC01554Q52M75 96 aa9.42□□□□□ -0.9
CXCL16-203ENST00000574412 LCE2BO14633 110 aa9.42□□□□□ -0.9
CXCL16-203ENST00000574412 KRTAP9-2Q9BYQ4 174 aa9.41□□□□□ -0.9
CXCL16-203ENST00000574412 PMAIP1Q13794 54 aa9.39□□□□□ -0.91
CXCL16-203ENST00000574412 LCE2DQ5TA82 110 aaPredicted RBP9.37□□□□□ -0.91
CXCL16-203ENST00000574412 USH2AO75445 5202 aa9.3□□□□□ -0.92
CXCL16-203ENST00000574412 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
CXCL16-203ENST00000574412 KRTAP12-2P59991 146 aa9.27□□□□□ -0.93
CXCL16-203ENST00000574412 KRTAP19-8Q3LI54 63 aa9.26□□□□□ -0.93
CXCL16-203ENST00000574412 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
CXCL16-203ENST00000574412 K7ERS5 55 aa9.23□□□□□ -0.93
CXCL16-203ENST00000574412 FSIP2Q5CZC0 6907 aa9.23□□□□□ -0.93
CXCL16-203ENST00000574412 A6NN06 94 aa9.23□□□□□ -0.93
CXCL16-203ENST00000574412 MT1BP07438 61 aa9.22□□□□□ -0.93
CXCL16-203ENST00000574412 PLAC4Q8WY50 150 aa9.1□□□□□ -0.95
CXCL16-203ENST00000574412 SSPOA2VEC9 5147 aa9.06□□□□□ -0.96
CXCL16-203ENST00000574412 KTN1-AS1Q86SY8 53 aa9.06□□□□□ -0.96
CXCL16-203ENST00000574412 KRTAP9-6A0A140TA67 174 aa9.04□□□□□ -0.96
CXCL16-203ENST00000574412 CAMK2N1Q7Z7J9 78 aa8.96□□□□□ -0.98
CXCL16-203ENST00000574412 CRCT1Q9UGL9 99 aa8.88□□□□□ -0.99
CXCL16-203ENST00000574412 KRTAP19-6Q3LI70 58 aa8.88□□□□□ -0.99
CXCL16-203ENST00000574412 ROMO1P60602 79 aa8.87□□□□□ -0.99
CXCL16-203ENST00000574412 MT1XP80297 61 aa8.84□□□□□ -0.99
CXCL16-203ENST00000574412 KRTAP10-5P60370 271 aa8.81□□□□□ -1
CXCL16-203ENST00000574412 C10orf95Q9H7T3 257 aa8.81□□□□□ -1
CXCL16-203ENST00000574412 PRO2289Q9P1D8 64 aa8.75□□□□□ -1.01
CXCL16-203ENST00000574412 FCGBPQ9Y6R7 5405 aaPredicted RBP8.74□□□□□ -1.01
CXCL16-203ENST00000574412 PRAC1Q96KF2 57 aa8.6□□□□□ -1.03
CXCL16-203ENST00000574412 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
CXCL16-203ENST00000574412 TNP1P09430 55 aa8.52□□□□□ -1.05
CXCL16-203ENST00000574412 KRTAP10-7P60409 375 aaPredicted RBP8.49□□□□□ -1.05
CXCL16-203ENST00000574412 H3BS24 57 aa8.49□□□□□ -1.05
CXCL16-203ENST00000574412 KMT2DO14686 5537 aa8.38□□□□□ -1.07
CXCL16-203ENST00000574412 MACF1Q9UPN3 7388 aaKnown RBP8.38□□□□□ -1.07
CXCL16-203ENST00000574412 KRTAP10-12P60413 245 aa8.35□□□□□ -1.07
CXCL16-203ENST00000574412 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.29□□□□□ -1.08
CXCL16-203ENST00000574412 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.08
CXCL16-203ENST00000574412 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.08
CXCL16-203ENST00000574412 KRTAP23-1A1A580 65 aa8.24□□□□□ -1.09
CXCL16-203ENST00000574412 PP632Q6XCG6 107 aa8.22□□□□□ -1.09
CXCL16-203ENST00000574412 LCE3AQ5TA76 89 aa8.2□□□□□ -1.1
CXCL16-203ENST00000574412 SYNE2Q8WXH0 6885 aaKnown RBP8.19□□□□□ -1.1
CXCL16-203ENST00000574412 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
CXCL16-203ENST00000574412 KRTAP8-1Q8IUC2 63 aa8.11□□□□□ -1.11
CXCL16-203ENST00000574412 KRTAP19-5Q3LI72 72 aa7.92□□□□□ -1.14
CXCL16-203ENST00000574412 SPRR2FQ96RM1 72 aa7.92□□□□□ -1.14
CXCL16-203ENST00000574412 KRTAP6-3Q3LI67 103 aa7.89□□□□□ -1.15
CXCL16-203ENST00000574412 KRTAP19-7Q3SYF9 63 aa7.89□□□□□ -1.15
CXCL16-203ENST00000574412 KRTAP5-9P26371 169 aa7.86□□□□□ -1.15
CXCL16-203ENST00000574412 KRTAP12-3P60328 96 aa7.86□□□□□ -1.15
CXCL16-203ENST00000574412 MUC12Q9UKN1 5478 aa7.84□□□□□ -1.15
CXCL16-203ENST00000574412 MT1EP04732 61 aa7.76□□□□□ -1.17
CXCL16-203ENST00000574412 MDN1Q9NU22 5596 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms