RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
RPA1-207ENST00000574049 DNAH8Q96JB1 4490 aa4.26□□□□□ -1.73
RPA1-207ENST00000574049 DMAC1Q96GE9 116 aa4.26□□□□□ -1.73
RPA1-207ENST00000574049 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
RPA1-207ENST00000574049 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.74
RPA1-207ENST00000574049 ROMO1P60602 79 aa4.21□□□□□ -1.74
RPA1-207ENST00000574049 PKD1P98161 4303 aa4.2□□□□□ -1.74
RPA1-207ENST00000574049 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
RPA1-207ENST00000574049 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
RPA1-207ENST00000574049 KRTAP4-5Q9BYR2 181 aa4.19□□□□□ -1.74
RPA1-207ENST00000574049 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
RPA1-207ENST00000574049 RYR1P21817 5038 aa4.19□□□□□ -1.74
RPA1-207ENST00000574049 EPPK1P58107 5090 aaKnown RBP4.18□□□□□ -1.74
RPA1-207ENST00000574049 ASB16-AS1Q495Z4 193 aa4.18□□□□□ -1.74
RPA1-207ENST00000574049 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
RPA1-207ENST00000574049 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
RPA1-207ENST00000574049 A8MUU9 505 aa4.15□□□□□ -1.75
RPA1-207ENST00000574049 KRTAP10-4P60372 401 aaPredicted RBP4.15□□□□□ -1.75
RPA1-207ENST00000574049 M0R2T5 61 aa4.14□□□□□ -1.75
RPA1-207ENST00000574049 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
RPA1-207ENST00000574049 MYCBP2O75592 4640 aa4.11□□□□□ -1.75
RPA1-207ENST00000574049 S4R3F8 94 aa4.11□□□□□ -1.75
RPA1-207ENST00000574049 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
RPA1-207ENST00000574049 HSPG2P98160 4391 aa4.09□□□□□ -1.75
RPA1-207ENST00000574049 RPL37P61927 97 aaKnown RBP4.09□□□□□ -1.75
RPA1-207ENST00000574049 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
RPA1-207ENST00000574049 R4GN34 69 aa4.07□□□□□ -1.76
RPA1-207ENST00000574049 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
RPA1-207ENST00000574049 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
RPA1-207ENST00000574049 H0YAA0 97 aa4.05□□□□□ -1.76
RPA1-207ENST00000574049 M0QZ58 72 aa4.03□□□□□ -1.76
RPA1-207ENST00000574049 HERC2O95714 4834 aa4.03□□□□□ -1.76
RPA1-207ENST00000574049 MT1HL1P0DM35 61 aa4.03□□□□□ -1.76
RPA1-207ENST00000574049 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
RPA1-207ENST00000574049 RPS29P62273 56 aaKnown RBP4.01□□□□□ -1.77
RPA1-207ENST00000574049 BIRC6Q9NR09 4857 aa3.99□□□□□ -1.77
RPA1-207ENST00000574049 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
RPA1-207ENST00000574049 XP32Q5T750 250 aa3.95□□□□□ -1.78
RPA1-207ENST00000574049 KRTAP13-3Q3SY46 172 aa3.93□□□□□ -1.78
RPA1-207ENST00000574049 P0C880 135 aa3.92□□□□□ -1.78
RPA1-207ENST00000574049 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
RPA1-207ENST00000574049 LRP2P98164 4655 aa3.89□□□□□ -1.79
RPA1-207ENST00000574049 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
RPA1-207ENST00000574049 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
RPA1-207ENST00000574049 LPAP08519 4548 aa3.85□□□□□ -1.79
RPA1-207ENST00000574049 HERC1Q15751 4861 aa3.85□□□□□ -1.79
RPA1-207ENST00000574049 TNXBP22105 4242 aa3.85□□□□□ -1.79
RPA1-207ENST00000574049 PCLOQ9Y6V0 5065 aa3.81□□□□□ -1.8
RPA1-207ENST00000574049 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
RPA1-207ENST00000574049 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
RPA1-207ENST00000574049 KRTAP12-2P59991 146 aa3.73□□□□□ -1.81
RPA1-207ENST00000574049 MUC2Q02817 5179 aa3.7□□□□□ -1.82
RPA1-207ENST00000574049 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
RPA1-207ENST00000574049 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
RPA1-207ENST00000574049 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
RPA1-207ENST00000574049 KRTAP10-10P60014 251 aa3.65□□□□□ -1.83
RPA1-207ENST00000574049 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
RPA1-207ENST00000574049 HMCN2Q8NDA2 5059 aa3.62□□□□□ -1.83
RPA1-207ENST00000574049 KRTAP12-1P59990 96 aa3.62□□□□□ -1.83
RPA1-207ENST00000574049 TNP1P09430 55 aa3.59□□□□□ -1.83
RPA1-207ENST00000574049 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
RPA1-207ENST00000574049 PRO2289Q9P1D8 64 aa3.55□□□□□ -1.84
RPA1-207ENST00000574049 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
RPA1-207ENST00000574049 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
RPA1-207ENST00000574049 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
RPA1-207ENST00000574049 MT1HP80294 61 aa3.41□□□□□ -1.86
RPA1-207ENST00000574049 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
RPA1-207ENST00000574049 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
RPA1-207ENST00000574049 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
RPA1-207ENST00000574049 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
RPA1-207ENST00000574049 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
RPA1-207ENST00000574049 KRTAP9-2Q9BYQ4 174 aa3.3□□□□□ -1.88
RPA1-207ENST00000574049 MT2AP02795 61 aa3.3□□□□□ -1.88
RPA1-207ENST00000574049 MT1FP04733 61 aa3.29□□□□□ -1.88
RPA1-207ENST00000574049 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
RPA1-207ENST00000574049 KRTAP9-8Q9BYQ0 159 aa3.23□□□□□ -1.89
RPA1-207ENST00000574049 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
RPA1-207ENST00000574049 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
RPA1-207ENST00000574049 CRCT1Q9UGL9 99 aa3.18□□□□□ -1.9
RPA1-207ENST00000574049 KRTAP19-1Q8IUB9 90 aa3.18□□□□□ -1.9
RPA1-207ENST00000574049 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
RPA1-207ENST00000574049 INE1O15225 51 aa3.17□□□□□ -1.9
RPA1-207ENST00000574049 USH2AO75445 5202 aa3.17□□□□□ -1.9
RPA1-207ENST00000574049 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
RPA1-207ENST00000574049 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
RPA1-207ENST00000574049 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
RPA1-207ENST00000574049 KRTAP9-3Q9BYQ3 159 aa3.11□□□□□ -1.91
RPA1-207ENST00000574049 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
RPA1-207ENST00000574049 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
RPA1-207ENST00000574049 MT1BP07438 61 aa3.06□□□□□ -1.92
RPA1-207ENST00000574049 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
RPA1-207ENST00000574049 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
RPA1-207ENST00000574049 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
RPA1-207ENST00000574049 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
RPA1-207ENST00000574049 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
RPA1-207ENST00000574049 MT1XP80297 61 aa2.97□□□□□ -1.93
RPA1-207ENST00000574049 KRTAP10-5P60370 271 aa2.95□□□□□ -1.94
RPA1-207ENST00000574049 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
RPA1-207ENST00000574049 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
RPA1-207ENST00000574049 KMT2DO14686 5537 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms