RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 MYCBP2O75592 4640 aa8.48□□□□□ -1.05
POLR2A-201ENST00000572844 KRTAP4-5Q9BYR2 181 aa8.44□□□□□ -1.06
POLR2A-201ENST00000572844 KTN1-AS1Q86SY8 53 aa8.41□□□□□ -1.06
POLR2A-201ENST00000572844 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
POLR2A-201ENST00000572844 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
POLR2A-201ENST00000572844 A0A1B0GU33 70 aa8.31□□□□□ -1.08
POLR2A-201ENST00000572844 H1FX-AS1Q4G0G2 97 aa8.31□□□□□ -1.08
POLR2A-201ENST00000572844 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
POLR2A-201ENST00000572844 HERC2O95714 4834 aa8.28□□□□□ -1.08
POLR2A-201ENST00000572844 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
POLR2A-201ENST00000572844 H0YAA0 97 aa8.27□□□□□ -1.09
POLR2A-201ENST00000572844 S4R3F8 94 aa8.26□□□□□ -1.09
POLR2A-201ENST00000572844 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.1
POLR2A-201ENST00000572844 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.11
POLR2A-201ENST00000572844 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
POLR2A-201ENST00000572844 J3QL48 77 aa8.1□□□□□ -1.11
POLR2A-201ENST00000572844 LRP2P98164 4655 aa8.09□□□□□ -1.11
POLR2A-201ENST00000572844 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
POLR2A-201ENST00000572844 CSAG1Q6PB30 78 aa8.02□□□□□ -1.12
POLR2A-201ENST00000572844 LPAP08519 4548 aa8.02□□□□□ -1.13
POLR2A-201ENST00000572844 K7ERS5 55 aa8.01□□□□□ -1.13
POLR2A-201ENST00000572844 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
POLR2A-201ENST00000572844 PRAC1Q96KF2 57 aa8□□□□□ -1.13
POLR2A-201ENST00000572844 P0C880 135 aa7.98□□□□□ -1.13
POLR2A-201ENST00000572844 KRTAP13-4Q3LI77 160 aa7.98□□□□□ -1.13
POLR2A-201ENST00000572844 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
POLR2A-201ENST00000572844 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
POLR2A-201ENST00000572844 HERC1Q15751 4861 aa7.85□□□□□ -1.15
POLR2A-201ENST00000572844 M0QZ58 72 aa7.85□□□□□ -1.15
POLR2A-201ENST00000572844 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
POLR2A-201ENST00000572844 A0A0D9SG42 100 aa7.84□□□□□ -1.15
POLR2A-201ENST00000572844 ROMO1P60602 79 aa7.77□□□□□ -1.17
POLR2A-201ENST00000572844 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
POLR2A-201ENST00000572844 LINC01554Q52M75 96 aa7.74□□□□□ -1.17
POLR2A-201ENST00000572844 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
POLR2A-201ENST00000572844 KRTAP12-1P59990 96 aa7.71□□□□□ -1.17
POLR2A-201ENST00000572844 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
POLR2A-201ENST00000572844 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
POLR2A-201ENST00000572844 SPINT4Q6UDR6 99 aa7.63□□□□□ -1.19
POLR2A-201ENST00000572844 R4GN34 69 aa7.62□□□□□ -1.19
POLR2A-201ENST00000572844 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
POLR2A-201ENST00000572844 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
POLR2A-201ENST00000572844 MUC2Q02817 5179 aa7.5□□□□□ -1.21
POLR2A-201ENST00000572844 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
POLR2A-201ENST00000572844 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
POLR2A-201ENST00000572844 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
POLR2A-201ENST00000572844 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
POLR2A-201ENST00000572844 RNF213Q63HN8 5207 aa7.32□□□□□ -1.24
POLR2A-201ENST00000572844 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
POLR2A-201ENST00000572844 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
POLR2A-201ENST00000572844 MT1HP80294 61 aa7.18□□□□□ -1.26
POLR2A-201ENST00000572844 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
POLR2A-201ENST00000572844 M0R2T5 61 aa7.12□□□□□ -1.27
POLR2A-201ENST00000572844 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
POLR2A-201ENST00000572844 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
POLR2A-201ENST00000572844 MT2AP02795 61 aa7.02□□□□□ -1.29
POLR2A-201ENST00000572844 KRTAP9-8Q9BYQ0 159 aa7□□□□□ -1.29
POLR2A-201ENST00000572844 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
POLR2A-201ENST00000572844 MT1FP04733 61 aa6.98□□□□□ -1.29
POLR2A-201ENST00000572844 PLAC4Q8WY50 150 aa6.98□□□□□ -1.29
POLR2A-201ENST00000572844 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
POLR2A-201ENST00000572844 TNP1P09430 55 aa6.95□□□□□ -1.3
POLR2A-201ENST00000572844 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
POLR2A-201ENST00000572844 KRTAP19-8Q3LI54 63 aa6.88□□□□□ -1.31
POLR2A-201ENST00000572844 MT1BP07438 61 aa6.73□□□□□ -1.33
POLR2A-201ENST00000572844 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
POLR2A-201ENST00000572844 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
POLR2A-201ENST00000572844 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
POLR2A-201ENST00000572844 NDUFAF8A1L188 74 aa6.62□□□□□ -1.35
POLR2A-201ENST00000572844 MT1XP80297 61 aa6.62□□□□□ -1.35
POLR2A-201ENST00000572844 H3BS24 57 aa6.61□□□□□ -1.35
POLR2A-201ENST00000572844 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
POLR2A-201ENST00000572844 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
POLR2A-201ENST00000572844 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
POLR2A-201ENST00000572844 SPRR5A0A1B0GTR4 108 aa6.46□□□□□ -1.37
POLR2A-201ENST00000572844 LCE2BO14633 110 aa6.44□□□□□ -1.38
POLR2A-201ENST00000572844 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
POLR2A-201ENST00000572844 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
POLR2A-201ENST00000572844 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
POLR2A-201ENST00000572844 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
POLR2A-201ENST00000572844 USH2AO75445 5202 aa6.23□□□□□ -1.41
POLR2A-201ENST00000572844 KRTAP19-5Q3LI72 72 aa6.08□□□□□ -1.44
POLR2A-201ENST00000572844 LCE2DQ5TA82 110 aaPredicted RBP6.03□□□□□ -1.44
POLR2A-201ENST00000572844 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
POLR2A-201ENST00000572844 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
POLR2A-201ENST00000572844 KRTAP4-8A0A0G2JLE6 195 aa5.98□□□□□ -1.45
POLR2A-201ENST00000572844 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
POLR2A-201ENST00000572844 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
POLR2A-201ENST00000572844 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
POLR2A-201ENST00000572844 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
POLR2A-201ENST00000572844 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
POLR2A-201ENST00000572844 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
POLR2A-201ENST00000572844 KMT2DO14686 5537 aa5.83□□□□□ -1.48
POLR2A-201ENST00000572844 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
POLR2A-201ENST00000572844 MT1EP04732 61 aa5.76□□□□□ -1.49
POLR2A-201ENST00000572844 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
POLR2A-201ENST00000572844 MT1LQ93083 61 aa5.73□□□□□ -1.49
POLR2A-201ENST00000572844 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
POLR2A-201ENST00000572844 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
POLR2A-201ENST00000572844 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms