RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
TVP23A-205ENST00000572428 RYR1P21817 5038 aa5□□□□□ -1.61
TVP23A-205ENST00000572428 KRTAP1-4P0C5Y4 121 aa4.97□□□□□ -1.61
TVP23A-205ENST00000572428 SMR3BP02814 79 aaPredicted RBP4.97□□□□□ -1.61
TVP23A-205ENST00000572428 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
TVP23A-205ENST00000572428 TPRXLQ17RH7 258 aa4.94□□□□□ -1.62
TVP23A-205ENST00000572428 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
TVP23A-205ENST00000572428 Q5VSD8 79 aa4.93□□□□□ -1.62
TVP23A-205ENST00000572428 FAT1Q14517 4588 aa4.93□□□□□ -1.62
TVP23A-205ENST00000572428 TP53AIP1Q9HCN2 124 aa4.91□□□□□ -1.62
TVP23A-205ENST00000572428 ACYP2P14621 99 aa4.91□□□□□ -1.62
TVP23A-205ENST00000572428 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.62
TVP23A-205ENST00000572428 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.62
TVP23A-205ENST00000572428 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
TVP23A-205ENST00000572428 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
TVP23A-205ENST00000572428 R4GN34 69 aa4.87□□□□□ -1.63
TVP23A-205ENST00000572428 MRPL34Q9BQ48 92 aaKnown RBP4.86□□□□□ -1.63
TVP23A-205ENST00000572428 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
TVP23A-205ENST00000572428 RPS29P62273 56 aaKnown RBP4.84□□□□□ -1.63
TVP23A-205ENST00000572428 TNXBP22105 4242 aa4.84□□□□□ -1.64
TVP23A-205ENST00000572428 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.64
TVP23A-205ENST00000572428 H0YAA0 97 aa4.84□□□□□ -1.64
TVP23A-205ENST00000572428 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.64
TVP23A-205ENST00000572428 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
TVP23A-205ENST00000572428 HERC2O95714 4834 aa4.83□□□□□ -1.64
TVP23A-205ENST00000572428 DMBT1Q9UGM3 2413 aaPredicted RBP4.81□□□□□ -1.64
TVP23A-205ENST00000572428 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
TVP23A-205ENST00000572428 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
TVP23A-205ENST00000572428 SPINK1P00995 79 aa4.8□□□□□ -1.64
TVP23A-205ENST00000572428 IGKV2D-30A0A075B6S6 120 aa4.78□□□□□ -1.64
TVP23A-205ENST00000572428 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
TVP23A-205ENST00000572428 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
TVP23A-205ENST00000572428 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
TVP23A-205ENST00000572428 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
TVP23A-205ENST00000572428 ABCA13Q86UQ4 5058 aa4.72□□□□□ -1.65
TVP23A-205ENST00000572428 C9orf92A6NGG3 77 aa4.71□□□□□ -1.65
TVP23A-205ENST00000572428 MYCBP2O75592 4640 aa4.69□□□□□ -1.66
TVP23A-205ENST00000572428 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.67
TVP23A-205ENST00000572428 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
TVP23A-205ENST00000572428 XP32Q5T750 250 aa4.5□□□□□ -1.69
TVP23A-205ENST00000572428 H1FX-AS1Q4G0G2 97 aa4.48□□□□□ -1.69
TVP23A-205ENST00000572428 RPL37P61927 97 aaKnown RBP4.47□□□□□ -1.69
TVP23A-205ENST00000572428 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
TVP23A-205ENST00000572428 LPAP08519 4548 aa4.44□□□□□ -1.7
TVP23A-205ENST00000572428 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
TVP23A-205ENST00000572428 HERC1Q15751 4861 aa4.4□□□□□ -1.71
TVP23A-205ENST00000572428 COX6B2Q6YFQ2 88 aa4.39□□□□□ -1.71
TVP23A-205ENST00000572428 INE1O15225 51 aa4.38□□□□□ -1.71
TVP23A-205ENST00000572428 LRP2P98164 4655 aa4.38□□□□□ -1.71
TVP23A-205ENST00000572428 A0A0D9SG42 100 aa4.37□□□□□ -1.71
TVP23A-205ENST00000572428 KRTAP4-1Q9BYQ7 146 aa4.29□□□□□ -1.72
TVP23A-205ENST00000572428 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
TVP23A-205ENST00000572428 KRTAP19-2Q3LHN2 52 aa4.23□□□□□ -1.73
TVP23A-205ENST00000572428 S4R3F8 94 aa4.23□□□□□ -1.73
TVP23A-205ENST00000572428 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
TVP23A-205ENST00000572428 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
TVP23A-205ENST00000572428 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
TVP23A-205ENST00000572428 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
TVP23A-205ENST00000572428 MUC2Q02817 5179 aa4.11□□□□□ -1.75
TVP23A-205ENST00000572428 FLGP20930 4061 aaPredicted RBP4.1□□□□□ -1.75
TVP23A-205ENST00000572428 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
TVP23A-205ENST00000572428 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
TVP23A-205ENST00000572428 MT1HP80294 61 aa4.03□□□□□ -1.76
TVP23A-205ENST00000572428 M0QZ58 72 aa4.03□□□□□ -1.77
TVP23A-205ENST00000572428 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
TVP23A-205ENST00000572428 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
TVP23A-205ENST00000572428 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
TVP23A-205ENST00000572428 KRTAP9-8Q9BYQ0 159 aa3.89□□□□□ -1.79
TVP23A-205ENST00000572428 M0R2T5 61 aa3.86□□□□□ -1.79
TVP23A-205ENST00000572428 MT2AP02795 61 aa3.84□□□□□ -1.79
TVP23A-205ENST00000572428 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
TVP23A-205ENST00000572428 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
TVP23A-205ENST00000572428 MT1FP04733 61 aa3.81□□□□□ -1.8
TVP23A-205ENST00000572428 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
TVP23A-205ENST00000572428 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
TVP23A-205ENST00000572428 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
TVP23A-205ENST00000572428 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
TVP23A-205ENST00000572428 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
TVP23A-205ENST00000572428 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
TVP23A-205ENST00000572428 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
TVP23A-205ENST00000572428 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
TVP23A-205ENST00000572428 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
TVP23A-205ENST00000572428 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
TVP23A-205ENST00000572428 MT1BP07438 61 aa3.61□□□□□ -1.83
TVP23A-205ENST00000572428 FSIP2Q5CZC0 6907 aa3.56□□□□□ -1.84
TVP23A-205ENST00000572428 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
TVP23A-205ENST00000572428 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
TVP23A-205ENST00000572428 TNP1P09430 55 aa3.56□□□□□ -1.84
TVP23A-205ENST00000572428 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
TVP23A-205ENST00000572428 USH2AO75445 5202 aa3.5□□□□□ -1.85
TVP23A-205ENST00000572428 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
TVP23A-205ENST00000572428 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
TVP23A-205ENST00000572428 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
TVP23A-205ENST00000572428 MT1XP80297 61 aa3.47□□□□□ -1.85
TVP23A-205ENST00000572428 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
TVP23A-205ENST00000572428 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
TVP23A-205ENST00000572428 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
TVP23A-205ENST00000572428 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
TVP23A-205ENST00000572428 KMT2DO14686 5537 aa3.39□□□□□ -1.87
TVP23A-205ENST00000572428 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms