RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 FAM236AA0A1B0GUQ0 79 aa3.23□□□□□ -1.89
SMG6-209ENST00000571442 FAM236BA0A1B0GV22 79 aa3.23□□□□□ -1.89
SMG6-209ENST00000571442 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
SMG6-209ENST00000571442 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
SMG6-209ENST00000571442 SCGB1A1P11684 91 aa3.22□□□□□ -1.89
SMG6-209ENST00000571442 MP68P56378 58 aa3.22□□□□□ -1.89
SMG6-209ENST00000571442 CSAG1Q6PB30 78 aa3.2□□□□□ -1.9
SMG6-209ENST00000571442 TRAV7A0A075B6U4 112 aa3.19□□□□□ -1.9
SMG6-209ENST00000571442 H3BPC8 53 aa3.19□□□□□ -1.9
SMG6-209ENST00000571442 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
SMG6-209ENST00000571442 A8MUN3 132 aa3.16□□□□□ -1.9
SMG6-209ENST00000571442 DMAC1Q96GE9 116 aa3.16□□□□□ -1.9
SMG6-209ENST00000571442 SNURFQ9Y675 71 aa3.16□□□□□ -1.9
SMG6-209ENST00000571442 NDUFC1O43677 76 aa3.14□□□□□ -1.91
SMG6-209ENST00000571442 MT1BP07438 61 aa3.14□□□□□ -1.91
SMG6-209ENST00000571442 SMIM20Q8N5G0 67 aa3.14□□□□□ -1.91
SMG6-209ENST00000571442 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
SMG6-209ENST00000571442 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
SMG6-209ENST00000571442 KRTAP19-8Q3LI54 63 aa3.11□□□□□ -1.91
SMG6-209ENST00000571442 C20orf197Q8N268 126 aa3.11□□□□□ -1.91
SMG6-209ENST00000571442 SERP2Q8N6R1 65 aa3.11□□□□□ -1.91
SMG6-209ENST00000571442 H0YAA0 97 aa3.1□□□□□ -1.91
SMG6-209ENST00000571442 ADM2Q7Z4H4 148 aa3.1□□□□□ -1.91
SMG6-209ENST00000571442 P0C880 135 aa3.09□□□□□ -1.91
SMG6-209ENST00000571442 KRTAP3-2Q9BYR7 98 aa3.09□□□□□ -1.91
SMG6-209ENST00000571442 CYSTM1Q9H1C7 97 aa3.08□□□□□ -1.92
SMG6-209ENST00000571442 ACYP2P14621 99 aa3.06□□□□□ -1.92
SMG6-209ENST00000571442 COX7CP15954 63 aa3.06□□□□□ -1.92
SMG6-209ENST00000571442 Q5VV11 94 aa3.06□□□□□ -1.92
SMG6-209ENST00000571442 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
SMG6-209ENST00000571442 SPANXA2-OT1Q8N9U9 137 aa3.05□□□□□ -1.92
SMG6-209ENST00000571442 NEBP20929 6669 aa3.04□□□□□ -1.92
SMG6-209ENST00000571442 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
SMG6-209ENST00000571442 H7BZZ5 65 aa3.01□□□□□ -1.93
SMG6-209ENST00000571442 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
SMG6-209ENST00000571442 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
SMG6-209ENST00000571442 A6NN06 94 aa2.99□□□□□ -1.93
SMG6-209ENST00000571442 CHKB-CPT1BH3BT56 60 aa2.99□□□□□ -1.93
SMG6-209ENST00000571442 COA5Q86WW8 74 aa2.99□□□□□ -1.93
SMG6-209ENST00000571442 CCDC179H3BU77 68 aa2.98□□□□□ -1.93
SMG6-209ENST00000571442 M0QZ58 72 aa2.98□□□□□ -1.93
SMG6-209ENST00000571442 ANAPC13Q9BS18 74 aa2.98□□□□□ -1.93
SMG6-209ENST00000571442 R4GN34 69 aa2.97□□□□□ -1.93
SMG6-209ENST00000571442 MT1XP80297 61 aa2.96□□□□□ -1.94
SMG6-209ENST00000571442 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
SMG6-209ENST00000571442 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
SMG6-209ENST00000571442 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
SMG6-209ENST00000571442 MDN1Q9NU22 5596 aa2.93□□□□□ -1.94
SMG6-209ENST00000571442 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
SMG6-209ENST00000571442 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
SMG6-209ENST00000571442 KMT2DO14686 5537 aa2.89□□□□□ -1.95
SMG6-209ENST00000571442 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
SMG6-209ENST00000571442 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
SMG6-209ENST00000571442 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.95
SMG6-209ENST00000571442 KRTAP10-7P60409 375 aaPredicted RBP2.83□□□□□ -1.96
SMG6-209ENST00000571442 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
SMG6-209ENST00000571442 KRTAP4-8Q9BYQ9 185 aa2.82□□□□□ -1.96
SMG6-209ENST00000571442 SERP1Q9Y6X1 66 aa2.82□□□□□ -1.96
SMG6-209ENST00000571442 A0A0D9SG42 100 aa2.81□□□□□ -1.96
SMG6-209ENST00000571442 A0A1B0GU33 70 aa2.81□□□□□ -1.96
SMG6-209ENST00000571442 ATP5EP56381 51 aaPredicted RBP2.81□□□□□ -1.96
SMG6-209ENST00000571442 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
SMG6-209ENST00000571442 SEC61GP60059 68 aa2.81□□□□□ -1.96
SMG6-209ENST00000571442 TMEM258P61165 79 aa2.81□□□□□ -1.96
SMG6-209ENST00000571442 A0A1B0GU69 56 aa2.79□□□□□ -1.96
SMG6-209ENST00000571442 A8MU10 97 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 SPRR2EP22531 72 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 SPRR2BP35325 72 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 SPRR2AP35326 72 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 PCP4P48539 62 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 KRTAP12-1P59990 96 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 KRTAP10-12P60413 245 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
SMG6-209ENST00000571442 LINC01558Q9Y6Z2 57 aa2.77□□□□□ -1.97
SMG6-209ENST00000571442 KRTAP8-1Q8IUC2 63 aa2.75□□□□□ -1.97
SMG6-209ENST00000571442 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
SMG6-209ENST00000571442 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
SMG6-209ENST00000571442 SMIM26A0A096LP01 95 aa2.7□□□□□ -1.98
SMG6-209ENST00000571442 PRR15LQ9BU68 103 aa2.69□□□□□ -1.98
SMG6-209ENST00000571442 SPRR2DP22532 72 aa2.68□□□□□ -1.98
SMG6-209ENST00000571442 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
SMG6-209ENST00000571442 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
SMG6-209ENST00000571442 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
SMG6-209ENST00000571442 C10orf95Q9H7T3 257 aa2.67□□□□□ -1.98
SMG6-209ENST00000571442 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.99
SMG6-209ENST00000571442 PSPHP1O15172 72 aa2.64□□□□□ -1.99
SMG6-209ENST00000571442 UQCR11O14957 56 aa2.63□□□□□ -1.99
SMG6-209ENST00000571442 Q1T7F1 81 aa2.63□□□□□ -1.99
SMG6-209ENST00000571442 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
SMG6-209ENST00000571442 MT1EP04732 61 aa2.6□□□□□ -1.99
SMG6-209ENST00000571442 MIR22HGQ0VDD5 57 aa2.6□□□□□ -1.99
SMG6-209ENST00000571442 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
SMG6-209ENST00000571442 V9GYY9 64 aa2.59□□□□□ -1.99
SMG6-209ENST00000571442 LCE3AQ5TA76 89 aa2.58□□□□□ -2
SMG6-209ENST00000571442 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
SMG6-209ENST00000571442 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
SMG6-209ENST00000571442 TNP1P09430 55 aa2.56□□□□□ -2
SMG6-209ENST00000571442 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms