RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.7
TCF4-246ENST00000570287 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
TCF4-246ENST00000570287 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
TCF4-246ENST00000570287 DYNC1H1Q14204 4646 aaKnown RBP4.41□□□□□ -1.7
TCF4-246ENST00000570287 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
TCF4-246ENST00000570287 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
TCF4-246ENST00000570287 SPINK1P00995 79 aa4.4□□□□□ -1.7
TCF4-246ENST00000570287 PKHD1P08F94 4074 aa4.4□□□□□ -1.71
TCF4-246ENST00000570287 LINC00304Q8N9R0 145 aa4.38□□□□□ -1.71
TCF4-246ENST00000570287 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
TCF4-246ENST00000570287 H0YAA0 97 aa4.37□□□□□ -1.71
TCF4-246ENST00000570287 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
TCF4-246ENST00000570287 A0A1B0GVY2 172 aa4.35□□□□□ -1.71
TCF4-246ENST00000570287 A0A1B0GU33 70 aa4.34□□□□□ -1.71
TCF4-246ENST00000570287 R4GN34 69 aa4.33□□□□□ -1.72
TCF4-246ENST00000570287 RYR2Q92736 4967 aa4.33□□□□□ -1.72
TCF4-246ENST00000570287 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
TCF4-246ENST00000570287 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
TCF4-246ENST00000570287 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
TCF4-246ENST00000570287 FAT1Q14517 4588 aa4.32□□□□□ -1.72
TCF4-246ENST00000570287 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
TCF4-246ENST00000570287 KMT2CQ8NEZ4 4911 aaKnown RBP4.3□□□□□ -1.72
TCF4-246ENST00000570287 RYR3Q15413 4870 aa4.3□□□□□ -1.72
TCF4-246ENST00000570287 KRTAP10-4P60372 401 aaPredicted RBP4.3□□□□□ -1.72
TCF4-246ENST00000570287 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
TCF4-246ENST00000570287 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
TCF4-246ENST00000570287 XP32Q5T750 250 aa4.22□□□□□ -1.73
TCF4-246ENST00000570287 C9orf92A6NGG3 77 aa4.21□□□□□ -1.74
TCF4-246ENST00000570287 FAT3Q8TDW7 4589 aa4.19□□□□□ -1.74
TCF4-246ENST00000570287 TNXBP22105 4242 aa4.17□□□□□ -1.74
TCF4-246ENST00000570287 HSPG2P98160 4391 aa4.16□□□□□ -1.74
TCF4-246ENST00000570287 CRIPTQ9P021 101 aa4.16□□□□□ -1.74
TCF4-246ENST00000570287 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
TCF4-246ENST00000570287 FLG2Q5D862 2391 aaPredicted RBP4.15□□□□□ -1.75
TCF4-246ENST00000570287 RYR1P21817 5038 aa4.14□□□□□ -1.75
TCF4-246ENST00000570287 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
TCF4-246ENST00000570287 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
TCF4-246ENST00000570287 Q5VSD8 79 aa4.14□□□□□ -1.75
TCF4-246ENST00000570287 COX6B2Q6YFQ2 88 aa4.13□□□□□ -1.75
TCF4-246ENST00000570287 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
TCF4-246ENST00000570287 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
TCF4-246ENST00000570287 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.09□□□□□ -1.75
TCF4-246ENST00000570287 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.76
TCF4-246ENST00000570287 RPL37P61927 97 aaKnown RBP4.08□□□□□ -1.76
TCF4-246ENST00000570287 KRTAP4-8A0A0G2JLE6 195 aa4.06□□□□□ -1.76
TCF4-246ENST00000570287 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
TCF4-246ENST00000570287 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
TCF4-246ENST00000570287 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
TCF4-246ENST00000570287 HERC2O95714 4834 aa4.03□□□□□ -1.76
TCF4-246ENST00000570287 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
TCF4-246ENST00000570287 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
TCF4-246ENST00000570287 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
TCF4-246ENST00000570287 DMBT1Q9UGM3 2413 aaPredicted RBP4.01□□□□□ -1.77
TCF4-246ENST00000570287 MYCBP2O75592 4640 aa4.01□□□□□ -1.77
TCF4-246ENST00000570287 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
TCF4-246ENST00000570287 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
TCF4-246ENST00000570287 LCE1FQ5T754 118 aa4□□□□□ -1.77
TCF4-246ENST00000570287 PCLOQ9Y6V0 5065 aa3.99□□□□□ -1.77
TCF4-246ENST00000570287 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
TCF4-246ENST00000570287 S4R3F8 94 aa3.94□□□□□ -1.78
TCF4-246ENST00000570287 A0A0D9SG42 100 aa3.92□□□□□ -1.78
TCF4-246ENST00000570287 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
TCF4-246ENST00000570287 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
TCF4-246ENST00000570287 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
TCF4-246ENST00000570287 LRP2P98164 4655 aa3.89□□□□□ -1.79
TCF4-246ENST00000570287 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
TCF4-246ENST00000570287 LPAP08519 4548 aa3.86□□□□□ -1.79
TCF4-246ENST00000570287 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
TCF4-246ENST00000570287 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
TCF4-246ENST00000570287 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
TCF4-246ENST00000570287 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
TCF4-246ENST00000570287 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
TCF4-246ENST00000570287 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
TCF4-246ENST00000570287 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
TCF4-246ENST00000570287 M0QZ58 72 aa3.76□□□□□ -1.81
TCF4-246ENST00000570287 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
TCF4-246ENST00000570287 INE1O15225 51 aa3.75□□□□□ -1.81
TCF4-246ENST00000570287 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
TCF4-246ENST00000570287 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
TCF4-246ENST00000570287 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
TCF4-246ENST00000570287 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
TCF4-246ENST00000570287 KRTAP19-2Q3LHN2 52 aa3.64□□□□□ -1.83
TCF4-246ENST00000570287 MT3P25713 68 aa3.63□□□□□ -1.83
TCF4-246ENST00000570287 PP632Q6XCG6 107 aa3.62□□□□□ -1.83
TCF4-246ENST00000570287 HERC1Q15751 4861 aa3.6□□□□□ -1.83
TCF4-246ENST00000570287 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.83
TCF4-246ENST00000570287 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
TCF4-246ENST00000570287 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
TCF4-246ENST00000570287 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
TCF4-246ENST00000570287 MUC2Q02817 5179 aa3.54□□□□□ -1.84
TCF4-246ENST00000570287 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
TCF4-246ENST00000570287 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
TCF4-246ENST00000570287 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
TCF4-246ENST00000570287 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
TCF4-246ENST00000570287 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
TCF4-246ENST00000570287 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
TCF4-246ENST00000570287 FAT4Q6V0I7 4981 aa3.4□□□□□ -1.87
TCF4-246ENST00000570287 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
TCF4-246ENST00000570287 MT1HP80294 61 aa3.36□□□□□ -1.87
TCF4-246ENST00000570287 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms