RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
GTF3C1-212ENST00000570129 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
GTF3C1-212ENST00000570129 S4R3F8 94 aa4.54□□□□□ -1.68
GTF3C1-212ENST00000570129 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
GTF3C1-212ENST00000570129 MT-ATP8P03928 68 aa4.52□□□□□ -1.69
GTF3C1-212ENST00000570129 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
GTF3C1-212ENST00000570129 LINC00208Q96KT6 92 aa4.52□□□□□ -1.69
GTF3C1-212ENST00000570129 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
GTF3C1-212ENST00000570129 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
GTF3C1-212ENST00000570129 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
GTF3C1-212ENST00000570129 J3QR89 54 aa4.48□□□□□ -1.69
GTF3C1-212ENST00000570129 CSAG1Q6PB30 78 aa4.48□□□□□ -1.69
GTF3C1-212ENST00000570129 ATOX1O00244 68 aa4.45□□□□□ -1.7
GTF3C1-212ENST00000570129 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
GTF3C1-212ENST00000570129 FAM236AA0A1B0GUQ0 79 aa4.43□□□□□ -1.7
GTF3C1-212ENST00000570129 FAM236BA0A1B0GV22 79 aa4.43□□□□□ -1.7
GTF3C1-212ENST00000570129 SCGB1A1P11684 91 aa4.42□□□□□ -1.7
GTF3C1-212ENST00000570129 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
GTF3C1-212ENST00000570129 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
GTF3C1-212ENST00000570129 MT1BP07438 61 aa4.41□□□□□ -1.7
GTF3C1-212ENST00000570129 MP68P56378 58 aa4.41□□□□□ -1.7
GTF3C1-212ENST00000570129 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
GTF3C1-212ENST00000570129 K7ERU9 68 aa4.4□□□□□ -1.71
GTF3C1-212ENST00000570129 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
GTF3C1-212ENST00000570129 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
GTF3C1-212ENST00000570129 IMUPQ9GZP8 106 aa4.36□□□□□ -1.71
GTF3C1-212ENST00000570129 NDUFC1O43677 76 aa4.35□□□□□ -1.71
GTF3C1-212ENST00000570129 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
GTF3C1-212ENST00000570129 ADM2Q7Z4H4 148 aa4.34□□□□□ -1.71
GTF3C1-212ENST00000570129 TRAV7A0A075B6U4 112 aa4.33□□□□□ -1.72
GTF3C1-212ENST00000570129 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
GTF3C1-212ENST00000570129 A8MUN3 132 aa4.32□□□□□ -1.72
GTF3C1-212ENST00000570129 H3BPC8 53 aa4.32□□□□□ -1.72
GTF3C1-212ENST00000570129 DMAC1Q96GE9 116 aa4.32□□□□□ -1.72
GTF3C1-212ENST00000570129 P0C880 135 aa4.31□□□□□ -1.72
GTF3C1-212ENST00000570129 Q5VV11 94 aa4.29□□□□□ -1.72
GTF3C1-212ENST00000570129 H0YAA0 97 aa4.26□□□□□ -1.73
GTF3C1-212ENST00000570129 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
GTF3C1-212ENST00000570129 C20orf197Q8N268 126 aa4.24□□□□□ -1.73
GTF3C1-212ENST00000570129 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
GTF3C1-212ENST00000570129 SMIM20Q8N5G0 67 aa4.23□□□□□ -1.73
GTF3C1-212ENST00000570129 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
GTF3C1-212ENST00000570129 A6NN06 94 aa4.22□□□□□ -1.73
GTF3C1-212ENST00000570129 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
GTF3C1-212ENST00000570129 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
GTF3C1-212ENST00000570129 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
GTF3C1-212ENST00000570129 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
GTF3C1-212ENST00000570129 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
GTF3C1-212ENST00000570129 ACYP2P14621 99 aa4.19□□□□□ -1.74
GTF3C1-212ENST00000570129 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
GTF3C1-212ENST00000570129 M0QZ58 72 aa4.15□□□□□ -1.75
GTF3C1-212ENST00000570129 MT1XP80297 61 aa4.15□□□□□ -1.75
GTF3C1-212ENST00000570129 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
GTF3C1-212ENST00000570129 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
GTF3C1-212ENST00000570129 R4GN34 69 aa4.13□□□□□ -1.75
GTF3C1-212ENST00000570129 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
GTF3C1-212ENST00000570129 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
GTF3C1-212ENST00000570129 CHKB-CPT1BH3BT56 60 aa4.11□□□□□ -1.75
GTF3C1-212ENST00000570129 COX7CP15954 63 aa4.11□□□□□ -1.75
GTF3C1-212ENST00000570129 KRTAP13-4Q3LI77 160 aa4.1□□□□□ -1.75
GTF3C1-212ENST00000570129 COA5Q86WW8 74 aa4.08□□□□□ -1.76
GTF3C1-212ENST00000570129 H7BZZ5 65 aa4.07□□□□□ -1.76
GTF3C1-212ENST00000570129 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
GTF3C1-212ENST00000570129 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
GTF3C1-212ENST00000570129 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
GTF3C1-212ENST00000570129 CCDC179H3BU77 68 aa4.04□□□□□ -1.76
GTF3C1-212ENST00000570129 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
GTF3C1-212ENST00000570129 KMT2DO14686 5537 aa4.03□□□□□ -1.76
GTF3C1-212ENST00000570129 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
GTF3C1-212ENST00000570129 ANAPC13Q9BS18 74 aa4.01□□□□□ -1.77
GTF3C1-212ENST00000570129 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
GTF3C1-212ENST00000570129 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
GTF3C1-212ENST00000570129 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.77
GTF3C1-212ENST00000570129 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
GTF3C1-212ENST00000570129 NEBP20929 6669 aa3.95□□□□□ -1.78
GTF3C1-212ENST00000570129 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
GTF3C1-212ENST00000570129 SEC61GP60059 68 aa3.94□□□□□ -1.78
GTF3C1-212ENST00000570129 A0A0D9SG42 100 aa3.93□□□□□ -1.78
GTF3C1-212ENST00000570129 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
GTF3C1-212ENST00000570129 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
GTF3C1-212ENST00000570129 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
GTF3C1-212ENST00000570129 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
GTF3C1-212ENST00000570129 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
GTF3C1-212ENST00000570129 A0A1B0GU33 70 aa3.87□□□□□ -1.79
GTF3C1-212ENST00000570129 A8MU10 97 aa3.86□□□□□ -1.79
GTF3C1-212ENST00000570129 SERP1Q9Y6X1 66 aa3.86□□□□□ -1.79
GTF3C1-212ENST00000570129 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
GTF3C1-212ENST00000570129 SPRR2EP22531 72 aa3.83□□□□□ -1.8
GTF3C1-212ENST00000570129 SPRR2BP35325 72 aa3.83□□□□□ -1.8
GTF3C1-212ENST00000570129 SPRR2AP35326 72 aa3.83□□□□□ -1.8
GTF3C1-212ENST00000570129 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
GTF3C1-212ENST00000570129 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
GTF3C1-212ENST00000570129 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
GTF3C1-212ENST00000570129 A0A1B0GU69 56 aa3.8□□□□□ -1.8
GTF3C1-212ENST00000570129 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
GTF3C1-212ENST00000570129 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
GTF3C1-212ENST00000570129 ATP5EP56381 51 aaPredicted RBP3.73□□□□□ -1.81
GTF3C1-212ENST00000570129 TMEM258P61165 79 aa3.73□□□□□ -1.81
GTF3C1-212ENST00000570129 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
GTF3C1-212ENST00000570129 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms