RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 SERP2Q8N6R1 65 aa7.8□□□□□ -1.16
CNEP1R1-210ENST00000568890 SNURFQ9Y675 71 aa7.8□□□□□ -1.16
CNEP1R1-210ENST00000568890 CSAG1Q6PB30 78 aa7.79□□□□□ -1.16
CNEP1R1-210ENST00000568890 A8MUN3 132 aa7.77□□□□□ -1.17
CNEP1R1-210ENST00000568890 C20orf197Q8N268 126 aa7.75□□□□□ -1.17
CNEP1R1-210ENST00000568890 LCE2BO14633 110 aa7.73□□□□□ -1.17
CNEP1R1-210ENST00000568890 DMAC1Q96GE9 116 aa7.73□□□□□ -1.17
CNEP1R1-210ENST00000568890 NDUFC1O43677 76 aa7.68□□□□□ -1.18
CNEP1R1-210ENST00000568890 USH2AO75445 5202 aa7.67□□□□□ -1.18
CNEP1R1-210ENST00000568890 COX7CP15954 63 aa7.66□□□□□ -1.18
CNEP1R1-210ENST00000568890 CYSTM1Q9H1C7 97 aa7.62□□□□□ -1.19
CNEP1R1-210ENST00000568890 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
CNEP1R1-210ENST00000568890 LOC100996750A0A140TA64 210 aa7.6□□□□□ -1.19
CNEP1R1-210ENST00000568890 KRTAP4-6Q9BYQ5 205 aa7.6□□□□□ -1.19
CNEP1R1-210ENST00000568890 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
CNEP1R1-210ENST00000568890 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.2
CNEP1R1-210ENST00000568890 ACYP2P14621 99 aa7.58□□□□□ -1.2
CNEP1R1-210ENST00000568890 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
CNEP1R1-210ENST00000568890 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
CNEP1R1-210ENST00000568890 SSPOA2VEC9 5147 aa7.55□□□□□ -1.2
CNEP1R1-210ENST00000568890 H0YAA0 97 aa7.53□□□□□ -1.2
CNEP1R1-210ENST00000568890 H7BZZ5 65 aa7.52□□□□□ -1.21
CNEP1R1-210ENST00000568890 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
CNEP1R1-210ENST00000568890 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
CNEP1R1-210ENST00000568890 CCDC179H3BU77 68 aa7.48□□□□□ -1.21
CNEP1R1-210ENST00000568890 P0C880 135 aa7.44□□□□□ -1.22
CNEP1R1-210ENST00000568890 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.23
CNEP1R1-210ENST00000568890 MT1BP07438 61 aa7.39□□□□□ -1.23
CNEP1R1-210ENST00000568890 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
CNEP1R1-210ENST00000568890 CRIPTQ9P021 101 aa7.38□□□□□ -1.23
CNEP1R1-210ENST00000568890 COA5Q86WW8 74 aa7.37□□□□□ -1.23
CNEP1R1-210ENST00000568890 FCGBPQ9Y6R7 5405 aaPredicted RBP7.34□□□□□ -1.23
CNEP1R1-210ENST00000568890 KRTAP19-6Q3LI70 58 aa7.33□□□□□ -1.24
CNEP1R1-210ENST00000568890 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
CNEP1R1-210ENST00000568890 Q5VV11 94 aa7.28□□□□□ -1.24
CNEP1R1-210ENST00000568890 R4GN34 69 aa7.24□□□□□ -1.25
CNEP1R1-210ENST00000568890 M0QZ58 72 aa7.22□□□□□ -1.25
CNEP1R1-210ENST00000568890 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
CNEP1R1-210ENST00000568890 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
CNEP1R1-210ENST00000568890 ATP5EP56381 51 aaPredicted RBP7.1□□□□□ -1.27
CNEP1R1-210ENST00000568890 TMEM258P61165 79 aa7.1□□□□□ -1.27
CNEP1R1-210ENST00000568890 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
CNEP1R1-210ENST00000568890 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
CNEP1R1-210ENST00000568890 A6NN06 94 aa7.08□□□□□ -1.28
CNEP1R1-210ENST00000568890 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
CNEP1R1-210ENST00000568890 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
CNEP1R1-210ENST00000568890 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
CNEP1R1-210ENST00000568890 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
CNEP1R1-210ENST00000568890 SEC61GP60059 68 aa7.01□□□□□ -1.29
CNEP1R1-210ENST00000568890 MT1XP80297 61 aa7□□□□□ -1.29
CNEP1R1-210ENST00000568890 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.29
CNEP1R1-210ENST00000568890 A0A1B0GU33 70 aa6.95□□□□□ -1.3
CNEP1R1-210ENST00000568890 SPATA8Q6RVD6 105 aa6.95□□□□□ -1.3
CNEP1R1-210ENST00000568890 A0A1B0GU69 56 aa6.95□□□□□ -1.3
CNEP1R1-210ENST00000568890 PCP4P48539 62 aa6.93□□□□□ -1.3
CNEP1R1-210ENST00000568890 LINC01558Q9Y6Z2 57 aa6.89□□□□□ -1.31
CNEP1R1-210ENST00000568890 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
CNEP1R1-210ENST00000568890 A0A0D9SG42 100 aa6.86□□□□□ -1.31
CNEP1R1-210ENST00000568890 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
CNEP1R1-210ENST00000568890 KMT2DO14686 5537 aa6.78□□□□□ -1.32
CNEP1R1-210ENST00000568890 A8MU10 97 aa6.77□□□□□ -1.33
CNEP1R1-210ENST00000568890 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
CNEP1R1-210ENST00000568890 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
CNEP1R1-210ENST00000568890 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
CNEP1R1-210ENST00000568890 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.33
CNEP1R1-210ENST00000568890 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.33
CNEP1R1-210ENST00000568890 SPINT4Q6UDR6 99 aa6.71□□□□□ -1.34
CNEP1R1-210ENST00000568890 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
CNEP1R1-210ENST00000568890 SMIM26A0A096LP01 95 aa6.68□□□□□ -1.34
CNEP1R1-210ENST00000568890 Q1T7F1 81 aa6.67□□□□□ -1.34
CNEP1R1-210ENST00000568890 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
CNEP1R1-210ENST00000568890 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
CNEP1R1-210ENST00000568890 PSPHP1O15172 72 aa6.64□□□□□ -1.35
CNEP1R1-210ENST00000568890 KRTAP10-12P60413 245 aa6.63□□□□□ -1.35
CNEP1R1-210ENST00000568890 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
CNEP1R1-210ENST00000568890 UQCR11O14957 56 aa6.61□□□□□ -1.35
CNEP1R1-210ENST00000568890 V9GYY9 64 aa6.59□□□□□ -1.35
CNEP1R1-210ENST00000568890 KRTAP5-9P26371 169 aa6.58□□□□□ -1.36
CNEP1R1-210ENST00000568890 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
CNEP1R1-210ENST00000568890 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
CNEP1R1-210ENST00000568890 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
CNEP1R1-210ENST00000568890 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
CNEP1R1-210ENST00000568890 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
CNEP1R1-210ENST00000568890 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
CNEP1R1-210ENST00000568890 NEBP20929 6669 aa6.38□□□□□ -1.39
CNEP1R1-210ENST00000568890 A6NED7 52 aa6.37□□□□□ -1.39
CNEP1R1-210ENST00000568890 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.4
CNEP1R1-210ENST00000568890 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
CNEP1R1-210ENST00000568890 TNP1P09430 55 aa6.26□□□□□ -1.41
CNEP1R1-210ENST00000568890 SPRR2EP22531 72 aa6.25□□□□□ -1.41
CNEP1R1-210ENST00000568890 SPRR2BP35325 72 aa6.25□□□□□ -1.41
CNEP1R1-210ENST00000568890 SPRR2AP35326 72 aa6.25□□□□□ -1.41
CNEP1R1-210ENST00000568890 K7ERS5 55 aa6.21□□□□□ -1.42
CNEP1R1-210ENST00000568890 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
CNEP1R1-210ENST00000568890 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
CNEP1R1-210ENST00000568890 MT1EP04732 61 aa6.16□□□□□ -1.42
CNEP1R1-210ENST00000568890 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
CNEP1R1-210ENST00000568890 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
CNEP1R1-210ENST00000568890 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
CNEP1R1-210ENST00000568890 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms