RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
COMMD4-224ENST00000568877 ANAPC13Q9BS18 74 aa7.93□□□□□ -1.14
COMMD4-224ENST00000568877 LCE2DQ5TA82 110 aaPredicted RBP7.92□□□□□ -1.14
COMMD4-224ENST00000568877 MT1FP04733 61 aa7.91□□□□□ -1.14
COMMD4-224ENST00000568877 NDUFC1O43677 76 aa7.9□□□□□ -1.14
COMMD4-224ENST00000568877 KRTAP10-10P60014 251 aa7.9□□□□□ -1.14
COMMD4-224ENST00000568877 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
COMMD4-224ENST00000568877 ACYP2P14621 99 aa7.86□□□□□ -1.15
COMMD4-224ENST00000568877 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
COMMD4-224ENST00000568877 H7BZZ5 65 aa7.78□□□□□ -1.16
COMMD4-224ENST00000568877 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
COMMD4-224ENST00000568877 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
COMMD4-224ENST00000568877 H0YAA0 97 aa7.72□□□□□ -1.17
COMMD4-224ENST00000568877 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.18
COMMD4-224ENST00000568877 KRTAP9-6A0A140TA67 174 aa7.69□□□□□ -1.18
COMMD4-224ENST00000568877 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
COMMD4-224ENST00000568877 ADM2Q7Z4H4 148 aa7.65□□□□□ -1.18
COMMD4-224ENST00000568877 LCE2BO14633 110 aa7.64□□□□□ -1.19
COMMD4-224ENST00000568877 COA5Q86WW8 74 aa7.63□□□□□ -1.19
COMMD4-224ENST00000568877 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
COMMD4-224ENST00000568877 USH2AO75445 5202 aa7.6□□□□□ -1.19
COMMD4-224ENST00000568877 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
COMMD4-224ENST00000568877 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
COMMD4-224ENST00000568877 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
COMMD4-224ENST00000568877 ATP5EP56381 51 aaPredicted RBP7.53□□□□□ -1.2
COMMD4-224ENST00000568877 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
COMMD4-224ENST00000568877 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
COMMD4-224ENST00000568877 P0C880 135 aa7.52□□□□□ -1.21
COMMD4-224ENST00000568877 TMEM258P61165 79 aa7.49□□□□□ -1.21
COMMD4-224ENST00000568877 SSPOA2VEC9 5147 aa7.43□□□□□ -1.22
COMMD4-224ENST00000568877 KRTAP19-8Q3LI54 63 aa7.43□□□□□ -1.22
COMMD4-224ENST00000568877 R4GN34 69 aa7.41□□□□□ -1.22
COMMD4-224ENST00000568877 Q5VV11 94 aa7.39□□□□□ -1.23
COMMD4-224ENST00000568877 M0QZ58 72 aa7.38□□□□□ -1.23
COMMD4-224ENST00000568877 MT1BP07438 61 aa7.37□□□□□ -1.23
COMMD4-224ENST00000568877 SEC61GP60059 68 aa7.35□□□□□ -1.23
COMMD4-224ENST00000568877 PCP4P48539 62 aa7.34□□□□□ -1.23
COMMD4-224ENST00000568877 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
COMMD4-224ENST00000568877 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
COMMD4-224ENST00000568877 LINC01554Q52M75 96 aa7.25□□□□□ -1.25
COMMD4-224ENST00000568877 A0A1B0GU69 56 aa7.23□□□□□ -1.25
COMMD4-224ENST00000568877 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
COMMD4-224ENST00000568877 KRTAP13-4Q3LI77 160 aa7.19□□□□□ -1.26
COMMD4-224ENST00000568877 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
COMMD4-224ENST00000568877 A0A1B0GU33 70 aa7.18□□□□□ -1.26
COMMD4-224ENST00000568877 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
COMMD4-224ENST00000568877 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
COMMD4-224ENST00000568877 A6NN06 94 aa7.13□□□□□ -1.27
COMMD4-224ENST00000568877 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
COMMD4-224ENST00000568877 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.27
COMMD4-224ENST00000568877 A0A0D9SG42 100 aa7.02□□□□□ -1.29
COMMD4-224ENST00000568877 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.29
COMMD4-224ENST00000568877 MT1XP80297 61 aa7.01□□□□□ -1.29
COMMD4-224ENST00000568877 RPS28P62857 69 aaKnown RBP7□□□□□ -1.29
COMMD4-224ENST00000568877 V9GYY9 64 aa7□□□□□ -1.29
COMMD4-224ENST00000568877 SMIM26A0A096LP01 95 aa6.99□□□□□ -1.29
COMMD4-224ENST00000568877 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
COMMD4-224ENST00000568877 Q1T7F1 81 aa6.98□□□□□ -1.29
COMMD4-224ENST00000568877 MACF1Q9UPN3 7388 aaKnown RBP6.94□□□□□ -1.3
COMMD4-224ENST00000568877 A8MU10 97 aa6.92□□□□□ -1.3
COMMD4-224ENST00000568877 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
COMMD4-224ENST00000568877 UQCR11O14957 56 aa6.91□□□□□ -1.3
COMMD4-224ENST00000568877 PSPHP1O15172 72 aa6.9□□□□□ -1.3
COMMD4-224ENST00000568877 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
COMMD4-224ENST00000568877 SPINT4Q6UDR6 99 aa6.9□□□□□ -1.3
COMMD4-224ENST00000568877 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
COMMD4-224ENST00000568877 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
COMMD4-224ENST00000568877 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
COMMD4-224ENST00000568877 MIR22HGQ0VDD5 57 aa6.79□□□□□ -1.32
COMMD4-224ENST00000568877 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
COMMD4-224ENST00000568877 A6NED7 52 aa6.69□□□□□ -1.34
COMMD4-224ENST00000568877 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
COMMD4-224ENST00000568877 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
COMMD4-224ENST00000568877 KMT2DO14686 5537 aa6.64□□□□□ -1.35
COMMD4-224ENST00000568877 K7ERS5 55 aa6.59□□□□□ -1.35
COMMD4-224ENST00000568877 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
COMMD4-224ENST00000568877 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
COMMD4-224ENST00000568877 KRTAP8-1Q8IUC2 63 aa6.56□□□□□ -1.36
COMMD4-224ENST00000568877 C10orf95Q9H7T3 257 aa6.56□□□□□ -1.36
COMMD4-224ENST00000568877 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
COMMD4-224ENST00000568877 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
COMMD4-224ENST00000568877 TNP1P09430 55 aa6.46□□□□□ -1.38
COMMD4-224ENST00000568877 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
COMMD4-224ENST00000568877 MUC12Q9UKN1 5478 aa6.43□□□□□ -1.38
COMMD4-224ENST00000568877 NEBP20929 6669 aa6.34□□□□□ -1.39
COMMD4-224ENST00000568877 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
COMMD4-224ENST00000568877 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
COMMD4-224ENST00000568877 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
COMMD4-224ENST00000568877 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
COMMD4-224ENST00000568877 SPRR2EP22531 72 aa6.25□□□□□ -1.41
COMMD4-224ENST00000568877 SPRR2BP35325 72 aa6.25□□□□□ -1.41
COMMD4-224ENST00000568877 SPRR2AP35326 72 aa6.25□□□□□ -1.41
COMMD4-224ENST00000568877 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
COMMD4-224ENST00000568877 ROMO1P60602 79 aa6.22□□□□□ -1.41
COMMD4-224ENST00000568877 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
COMMD4-224ENST00000568877 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
COMMD4-224ENST00000568877 MT1EP04732 61 aa6.19□□□□□ -1.42
COMMD4-224ENST00000568877 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
COMMD4-224ENST00000568877 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
COMMD4-224ENST00000568877 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms