RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 C9orf92A6NGG3 77 aa4.79□□□□□ -1.64
TCF4-241ENST00000568740 SPAG11AQ6PDA7 123 aa4.78□□□□□ -1.64
TCF4-241ENST00000568740 SPINK1P00995 79 aa4.78□□□□□ -1.64
TCF4-241ENST00000568740 Q5W150 140 aa4.78□□□□□ -1.64
TCF4-241ENST00000568740 MRPL34Q9BQ48 92 aaKnown RBP4.77□□□□□ -1.65
TCF4-241ENST00000568740 SPINK7P58062 85 aa4.77□□□□□ -1.65
TCF4-241ENST00000568740 PCOTHQ58A44 107 aa4.77□□□□□ -1.65
TCF4-241ENST00000568740 FAT3Q8TDW7 4589 aa4.76□□□□□ -1.65
TCF4-241ENST00000568740 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
TCF4-241ENST00000568740 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
TCF4-241ENST00000568740 HRES1P13985 223 aa4.74□□□□□ -1.65
TCF4-241ENST00000568740 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
TCF4-241ENST00000568740 TNXBP22105 4242 aa4.73□□□□□ -1.65
TCF4-241ENST00000568740 A0A1B0GU33 70 aa4.7□□□□□ -1.66
TCF4-241ENST00000568740 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
TCF4-241ENST00000568740 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
TCF4-241ENST00000568740 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
TCF4-241ENST00000568740 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
TCF4-241ENST00000568740 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
TCF4-241ENST00000568740 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
TCF4-241ENST00000568740 KRTAP13-3Q3SY46 172 aa4.64□□□□□ -1.67
TCF4-241ENST00000568740 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
TCF4-241ENST00000568740 LPAP08519 4548 aa4.63□□□□□ -1.67
TCF4-241ENST00000568740 RPS29P62273 56 aaKnown RBP4.62□□□□□ -1.67
TCF4-241ENST00000568740 ACYP2P14621 99 aa4.61□□□□□ -1.67
TCF4-241ENST00000568740 SPATA8Q6RVD6 105 aa4.6□□□□□ -1.67
TCF4-241ENST00000568740 HERC2O95714 4834 aa4.59□□□□□ -1.67
TCF4-241ENST00000568740 DMAC1Q96GE9 116 aa4.58□□□□□ -1.68
TCF4-241ENST00000568740 LRP2P98164 4655 aa4.57□□□□□ -1.68
TCF4-241ENST00000568740 A0A1B0GU69 56 aa4.57□□□□□ -1.68
TCF4-241ENST00000568740 R4GN34 69 aa4.57□□□□□ -1.68
TCF4-241ENST00000568740 HERC1Q15751 4861 aa4.56□□□□□ -1.68
TCF4-241ENST00000568740 UQCR11O14957 56 aa4.54□□□□□ -1.68
TCF4-241ENST00000568740 BIRC6Q9NR09 4857 aa4.53□□□□□ -1.68
TCF4-241ENST00000568740 XP32Q5T750 250 aa4.52□□□□□ -1.69
TCF4-241ENST00000568740 MUC2Q02817 5179 aa4.5□□□□□ -1.69
TCF4-241ENST00000568740 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
TCF4-241ENST00000568740 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
TCF4-241ENST00000568740 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.7
TCF4-241ENST00000568740 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
TCF4-241ENST00000568740 TPRXLQ17RH7 258 aa4.39□□□□□ -1.71
TCF4-241ENST00000568740 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
TCF4-241ENST00000568740 H0YAA0 97 aa4.34□□□□□ -1.72
TCF4-241ENST00000568740 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.72
TCF4-241ENST00000568740 COX6B2Q6YFQ2 88 aa4.33□□□□□ -1.72
TCF4-241ENST00000568740 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
TCF4-241ENST00000568740 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
TCF4-241ENST00000568740 KRTAP19-4Q3LI73 84 aa4.24□□□□□ -1.73
TCF4-241ENST00000568740 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
TCF4-241ENST00000568740 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
TCF4-241ENST00000568740 S4R3F8 94 aa4.22□□□□□ -1.73
TCF4-241ENST00000568740 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
TCF4-241ENST00000568740 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
TCF4-241ENST00000568740 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
TCF4-241ENST00000568740 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
TCF4-241ENST00000568740 KRTAP10-6P60371 365 aaPredicted RBP4.11□□□□□ -1.75
TCF4-241ENST00000568740 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
TCF4-241ENST00000568740 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
TCF4-241ENST00000568740 A0A0D9SG42 100 aa4.09□□□□□ -1.75
TCF4-241ENST00000568740 KRTAP9-4Q9BYQ2 154 aa4.07□□□□□ -1.76
TCF4-241ENST00000568740 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
TCF4-241ENST00000568740 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
TCF4-241ENST00000568740 M0R2T5 61 aa3.99□□□□□ -1.77
TCF4-241ENST00000568740 M0QZ58 72 aa3.96□□□□□ -1.78
TCF4-241ENST00000568740 INE1O15225 51 aa3.96□□□□□ -1.78
TCF4-241ENST00000568740 MT1HP80294 61 aa3.93□□□□□ -1.78
TCF4-241ENST00000568740 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
TCF4-241ENST00000568740 KRTAP12-2P59991 146 aa3.92□□□□□ -1.78
TCF4-241ENST00000568740 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
TCF4-241ENST00000568740 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
TCF4-241ENST00000568740 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
TCF4-241ENST00000568740 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
TCF4-241ENST00000568740 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
TCF4-241ENST00000568740 MT1FP04733 61 aa3.81□□□□□ -1.8
TCF4-241ENST00000568740 MT2AP02795 61 aa3.8□□□□□ -1.8
TCF4-241ENST00000568740 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
TCF4-241ENST00000568740 PLAC4Q8WY50 150 aa3.8□□□□□ -1.8
TCF4-241ENST00000568740 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
TCF4-241ENST00000568740 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
TCF4-241ENST00000568740 USH2AO75445 5202 aa3.79□□□□□ -1.8
TCF4-241ENST00000568740 KRTAP4-8Q9BYQ9 185 aa3.77□□□□□ -1.81
TCF4-241ENST00000568740 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
TCF4-241ENST00000568740 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
TCF4-241ENST00000568740 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
TCF4-241ENST00000568740 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
TCF4-241ENST00000568740 PP632Q6XCG6 107 aa3.7□□□□□ -1.82
TCF4-241ENST00000568740 SPRR2GQ9BYE4 73 aa3.67□□□□□ -1.82
TCF4-241ENST00000568740 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
TCF4-241ENST00000568740 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
TCF4-241ENST00000568740 MT1BP07438 61 aa3.59□□□□□ -1.83
TCF4-241ENST00000568740 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
TCF4-241ENST00000568740 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
TCF4-241ENST00000568740 MT3P25713 68 aa3.56□□□□□ -1.84
TCF4-241ENST00000568740 KMT2DO14686 5537 aa3.54□□□□□ -1.84
TCF4-241ENST00000568740 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
TCF4-241ENST00000568740 KRTAP10-5P60370 271 aa3.5□□□□□ -1.85
TCF4-241ENST00000568740 MT1XP80297 61 aa3.5□□□□□ -1.85
TCF4-241ENST00000568740 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
TCF4-241ENST00000568740 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
TCF4-241ENST00000568740 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 583.8 ms