RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
HERPUD1-215ENST00000568676 KMT2DO14686 5537 aa6.97□□□□□ -1.29
HERPUD1-215ENST00000568676 KLKP1Q107X0 134 aa6.96□□□□□ -1.3
HERPUD1-215ENST00000568676 MDN1Q9NU22 5596 aa6.95□□□□□ -1.3
HERPUD1-215ENST00000568676 KRTAP2-3P0C7H8 128 aa6.95□□□□□ -1.3
HERPUD1-215ENST00000568676 KRTAP2-4Q9BYR9 128 aa6.95□□□□□ -1.3
HERPUD1-215ENST00000568676 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
HERPUD1-215ENST00000568676 J3QR89 54 aa6.94□□□□□ -1.3
HERPUD1-215ENST00000568676 LCA10Q71F78 164 aa6.93□□□□□ -1.3
HERPUD1-215ENST00000568676 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
HERPUD1-215ENST00000568676 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
HERPUD1-215ENST00000568676 IMUPQ9GZP8 106 aa6.92□□□□□ -1.3
HERPUD1-215ENST00000568676 HIST1H4AP62805 103 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-215ENST00000568676 C1orf64Q8NEQ6 169 aa6.91□□□□□ -1.3
HERPUD1-215ENST00000568676 CRIPTQ9P021 101 aa6.91□□□□□ -1.3
HERPUD1-215ENST00000568676 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
HERPUD1-215ENST00000568676 A0A087WVE0 104 aa6.78□□□□□ -1.32
HERPUD1-215ENST00000568676 UQCRQO14949 82 aa6.78□□□□□ -1.32
HERPUD1-215ENST00000568676 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
HERPUD1-215ENST00000568676 SPRR2EP22531 72 aa6.77□□□□□ -1.33
HERPUD1-215ENST00000568676 SPRR2BP35325 72 aa6.77□□□□□ -1.33
HERPUD1-215ENST00000568676 SPRR2AP35326 72 aa6.77□□□□□ -1.33
HERPUD1-215ENST00000568676 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
HERPUD1-215ENST00000568676 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
HERPUD1-215ENST00000568676 K7ERU9 68 aa6.74□□□□□ -1.33
HERPUD1-215ENST00000568676 ATOX1O00244 68 aa6.74□□□□□ -1.33
HERPUD1-215ENST00000568676 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
HERPUD1-215ENST00000568676 H0Y9P7 68 aa6.71□□□□□ -1.34
HERPUD1-215ENST00000568676 KRTAP2-2Q9BYT5 123 aa6.71□□□□□ -1.34
HERPUD1-215ENST00000568676 KRTAP2-1Q9BYU5 128 aa6.71□□□□□ -1.34
HERPUD1-215ENST00000568676 H0YAA0 97 aa6.68□□□□□ -1.34
HERPUD1-215ENST00000568676 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
HERPUD1-215ENST00000568676 MP68P56378 58 aa6.66□□□□□ -1.34
HERPUD1-215ENST00000568676 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
HERPUD1-215ENST00000568676 OCR1Q9BZK8 76 aa6.65□□□□□ -1.34
HERPUD1-215ENST00000568676 LCE1AQ5T7P2 110 aa6.63□□□□□ -1.35
HERPUD1-215ENST00000568676 LINC00208Q96KT6 92 aa6.62□□□□□ -1.35
HERPUD1-215ENST00000568676 A8MUN3 132 aa6.61□□□□□ -1.35
HERPUD1-215ENST00000568676 NDUFC1O43677 76 aa6.61□□□□□ -1.35
HERPUD1-215ENST00000568676 MT1XP80297 61 aa6.6□□□□□ -1.35
HERPUD1-215ENST00000568676 H3BPC8 53 aa6.59□□□□□ -1.35
HERPUD1-215ENST00000568676 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
HERPUD1-215ENST00000568676 MT-ATP8P03928 68 aa6.58□□□□□ -1.36
HERPUD1-215ENST00000568676 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
HERPUD1-215ENST00000568676 SPRR2DP22532 72 aa6.56□□□□□ -1.36
HERPUD1-215ENST00000568676 SMIM20Q8N5G0 67 aa6.54□□□□□ -1.36
HERPUD1-215ENST00000568676 ADM2Q7Z4H4 148 aa6.52□□□□□ -1.37
HERPUD1-215ENST00000568676 TRAV7A0A075B6U4 112 aa6.47□□□□□ -1.37
HERPUD1-215ENST00000568676 R4GN34 69 aa6.44□□□□□ -1.38
HERPUD1-215ENST00000568676 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
HERPUD1-215ENST00000568676 C20orf197Q8N268 126 aa6.41□□□□□ -1.38
HERPUD1-215ENST00000568676 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
HERPUD1-215ENST00000568676 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
HERPUD1-215ENST00000568676 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
HERPUD1-215ENST00000568676 M0QZ58 72 aa6.33□□□□□ -1.4
HERPUD1-215ENST00000568676 SERP2Q8N6R1 65 aa6.33□□□□□ -1.4
HERPUD1-215ENST00000568676 ACYP2P14621 99 aa6.3□□□□□ -1.4
HERPUD1-215ENST00000568676 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
HERPUD1-215ENST00000568676 SNURFQ9Y675 71 aa6.3□□□□□ -1.4
HERPUD1-215ENST00000568676 P0C880 135 aa6.29□□□□□ -1.4
HERPUD1-215ENST00000568676 KRTAP10-7P60409 375 aaPredicted RBP6.27□□□□□ -1.41
HERPUD1-215ENST00000568676 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
HERPUD1-215ENST00000568676 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
HERPUD1-215ENST00000568676 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
HERPUD1-215ENST00000568676 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
HERPUD1-215ENST00000568676 COX7CP15954 63 aa6.19□□□□□ -1.42
HERPUD1-215ENST00000568676 GPR98Q8WXG9 6306 aa6.13□□□□□ -1.43
HERPUD1-215ENST00000568676 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
HERPUD1-215ENST00000568676 ANAPC13Q9BS18 74 aa6.09□□□□□ -1.43
HERPUD1-215ENST00000568676 DSTQ03001 7570 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-215ENST00000568676 H7BZZ5 65 aa6.03□□□□□ -1.44
HERPUD1-215ENST00000568676 COA5Q86WW8 74 aa6.02□□□□□ -1.45
HERPUD1-215ENST00000568676 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
HERPUD1-215ENST00000568676 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
HERPUD1-215ENST00000568676 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
HERPUD1-215ENST00000568676 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
HERPUD1-215ENST00000568676 SEC61GP60059 68 aa5.92□□□□□ -1.46
HERPUD1-215ENST00000568676 CCDC179H3BU77 68 aa5.91□□□□□ -1.46
HERPUD1-215ENST00000568676 KRTAP19-7Q3SYF9 63 aa5.91□□□□□ -1.46
HERPUD1-215ENST00000568676 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
HERPUD1-215ENST00000568676 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
HERPUD1-215ENST00000568676 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
HERPUD1-215ENST00000568676 MT1EP04732 61 aa5.88□□□□□ -1.47
HERPUD1-215ENST00000568676 ATP5EP56381 51 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-215ENST00000568676 LCE1DQ5T752 114 aa5.86□□□□□ -1.47
HERPUD1-215ENST00000568676 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
HERPUD1-215ENST00000568676 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
HERPUD1-215ENST00000568676 MT1GP13640 62 aa5.78□□□□□ -1.48
HERPUD1-215ENST00000568676 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
HERPUD1-215ENST00000568676 TMEM258P61165 79 aa5.76□□□□□ -1.49
HERPUD1-215ENST00000568676 A0A1B0GU33 70 aa5.74□□□□□ -1.49
HERPUD1-215ENST00000568676 A0A1B0GU69 56 aa5.74□□□□□ -1.49
HERPUD1-215ENST00000568676 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
HERPUD1-215ENST00000568676 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
HERPUD1-215ENST00000568676 MT4P47944 62 aa5.73□□□□□ -1.49
HERPUD1-215ENST00000568676 KRTAP4-7Q9BYR0 210 aa5.7□□□□□ -1.5
HERPUD1-215ENST00000568676 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
HERPUD1-215ENST00000568676 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
HERPUD1-215ENST00000568676 A0A0D9SG42 100 aa5.66□□□□□ -1.5
HERPUD1-215ENST00000568676 SPATA8Q6RVD6 105 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms