RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 K7ERU9 68 aa4.49□□□□□ -1.69
SF3B3-211ENST00000568291 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
SF3B3-211ENST00000568291 HIST1H4AP62805 103 aaKnown RBP4.47□□□□□ -1.69
SF3B3-211ENST00000568291 C5orf47Q569G3 176 aa4.47□□□□□ -1.69
SF3B3-211ENST00000568291 J3QR89 54 aa4.46□□□□□ -1.7
SF3B3-211ENST00000568291 ACYP1P07311 99 aa4.46□□□□□ -1.7
SF3B3-211ENST00000568291 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
SF3B3-211ENST00000568291 TP53AIP1Q9HCN2 124 aa4.46□□□□□ -1.7
SF3B3-211ENST00000568291 A0A087WVE0 104 aa4.45□□□□□ -1.7
SF3B3-211ENST00000568291 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
SF3B3-211ENST00000568291 CYP4F30PQ9H0H9 118 aa4.43□□□□□ -1.7
SF3B3-211ENST00000568291 KRTAP6-3Q3LI67 103 aa4.41□□□□□ -1.7
SF3B3-211ENST00000568291 LCA10Q71F78 164 aa4.41□□□□□ -1.7
SF3B3-211ENST00000568291 S4R3F8 94 aa4.41□□□□□ -1.7
SF3B3-211ENST00000568291 TRAV22A0A0B4J277 110 aa4.4□□□□□ -1.71
SF3B3-211ENST00000568291 ATP5EP2Q5VTU8 51 aa4.4□□□□□ -1.71
SF3B3-211ENST00000568291 LINC00643Q86TS7 51 aa4.39□□□□□ -1.71
SF3B3-211ENST00000568291 H0Y9P7 68 aa4.38□□□□□ -1.71
SF3B3-211ENST00000568291 FAM236AA0A1B0GUQ0 79 aa4.36□□□□□ -1.71
SF3B3-211ENST00000568291 FAM236BA0A1B0GV22 79 aa4.36□□□□□ -1.71
SF3B3-211ENST00000568291 UQCRQO14949 82 aa4.36□□□□□ -1.71
SF3B3-211ENST00000568291 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
SF3B3-211ENST00000568291 LOC101927531A0A1B0GV80 90 aa4.35□□□□□ -1.71
SF3B3-211ENST00000568291 KLKP1Q107X0 134 aa4.32□□□□□ -1.72
SF3B3-211ENST00000568291 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
SF3B3-211ENST00000568291 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
SF3B3-211ENST00000568291 NEBP20929 6669 aa4.29□□□□□ -1.72
SF3B3-211ENST00000568291 ATOX1O00244 68 aa4.29□□□□□ -1.72
SF3B3-211ENST00000568291 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
SF3B3-211ENST00000568291 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
SF3B3-211ENST00000568291 SCGB1A1P11684 91 aa4.27□□□□□ -1.73
SF3B3-211ENST00000568291 MP68P56378 58 aa4.26□□□□□ -1.73
SF3B3-211ENST00000568291 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
SF3B3-211ENST00000568291 MT1BP07438 61 aa4.25□□□□□ -1.73
SF3B3-211ENST00000568291 A6NN06 94 aa4.24□□□□□ -1.73
SF3B3-211ENST00000568291 NDUFC1O43677 76 aa4.23□□□□□ -1.73
SF3B3-211ENST00000568291 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
SF3B3-211ENST00000568291 Q5VV11 94 aa4.21□□□□□ -1.74
SF3B3-211ENST00000568291 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
SF3B3-211ENST00000568291 MUC12Q9UKN1 5478 aa4.2□□□□□ -1.74
SF3B3-211ENST00000568291 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
SF3B3-211ENST00000568291 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
SF3B3-211ENST00000568291 A8MUN3 132 aa4.18□□□□□ -1.74
SF3B3-211ENST00000568291 H3BPC8 53 aa4.15□□□□□ -1.75
SF3B3-211ENST00000568291 PCP4P48539 62 aa4.15□□□□□ -1.75
SF3B3-211ENST00000568291 KRTAP10-5P60370 271 aa4.15□□□□□ -1.75
SF3B3-211ENST00000568291 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
SF3B3-211ENST00000568291 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
SF3B3-211ENST00000568291 H0YAA0 97 aa4.12□□□□□ -1.75
SF3B3-211ENST00000568291 P0C880 135 aa4.12□□□□□ -1.75
SF3B3-211ENST00000568291 CRIPTQ9P021 101 aa4.12□□□□□ -1.75
SF3B3-211ENST00000568291 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
SF3B3-211ENST00000568291 SMIM20Q8N5G0 67 aa4.1□□□□□ -1.75
SF3B3-211ENST00000568291 SNURFQ9Y675 71 aa4.1□□□□□ -1.75
SF3B3-211ENST00000568291 ANAPC13Q9BS18 74 aa4.09□□□□□ -1.75
SF3B3-211ENST00000568291 MDN1Q9NU22 5596 aa4.08□□□□□ -1.76
SF3B3-211ENST00000568291 KMT2DO14686 5537 aa4.08□□□□□ -1.76
SF3B3-211ENST00000568291 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
SF3B3-211ENST00000568291 COX7CP15954 63 aa4.06□□□□□ -1.76
SF3B3-211ENST00000568291 M0QZ58 72 aa4.04□□□□□ -1.76
SF3B3-211ENST00000568291 ACYP2P14621 99 aa4.04□□□□□ -1.76
SF3B3-211ENST00000568291 R4GN34 69 aa4.04□□□□□ -1.76
SF3B3-211ENST00000568291 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
SF3B3-211ENST00000568291 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
SF3B3-211ENST00000568291 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
SF3B3-211ENST00000568291 CCDC179H3BU77 68 aa4.01□□□□□ -1.77
SF3B3-211ENST00000568291 KRTAP2-3P0C7H8 128 aa4.01□□□□□ -1.77
SF3B3-211ENST00000568291 KRTAP2-4Q9BYR9 128 aa4.01□□□□□ -1.77
SF3B3-211ENST00000568291 MT1XP80297 61 aa4□□□□□ -1.77
SF3B3-211ENST00000568291 PLAC4Q8WY50 150 aa4□□□□□ -1.77
SF3B3-211ENST00000568291 CHKB-CPT1BH3BT56 60 aa3.99□□□□□ -1.77
SF3B3-211ENST00000568291 SPRR2EP22531 72 aa3.98□□□□□ -1.77
SF3B3-211ENST00000568291 SPRR2BP35325 72 aa3.98□□□□□ -1.77
SF3B3-211ENST00000568291 SPRR2AP35326 72 aa3.98□□□□□ -1.77
SF3B3-211ENST00000568291 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
SF3B3-211ENST00000568291 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
SF3B3-211ENST00000568291 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
SF3B3-211ENST00000568291 H7BZZ5 65 aa3.93□□□□□ -1.78
SF3B3-211ENST00000568291 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
SF3B3-211ENST00000568291 TMEM258P61165 79 aa3.91□□□□□ -1.78
SF3B3-211ENST00000568291 SPANXA2-OT1Q8N9U9 137 aa3.91□□□□□ -1.78
SF3B3-211ENST00000568291 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
SF3B3-211ENST00000568291 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
SF3B3-211ENST00000568291 ATP5EP56381 51 aaPredicted RBP3.87□□□□□ -1.79
SF3B3-211ENST00000568291 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
SF3B3-211ENST00000568291 COA5Q86WW8 74 aa3.87□□□□□ -1.79
SF3B3-211ENST00000568291 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SF3B3-211ENST00000568291 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
SF3B3-211ENST00000568291 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
SF3B3-211ENST00000568291 SPRR2DP22532 72 aa3.84□□□□□ -1.79
SF3B3-211ENST00000568291 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
SF3B3-211ENST00000568291 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
SF3B3-211ENST00000568291 A0A0D9SG42 100 aa3.78□□□□□ -1.8
SF3B3-211ENST00000568291 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
SF3B3-211ENST00000568291 SERP1Q9Y6X1 66 aa3.77□□□□□ -1.81
SF3B3-211ENST00000568291 SEC61GP60059 68 aa3.75□□□□□ -1.81
SF3B3-211ENST00000568291 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
SF3B3-211ENST00000568291 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
SF3B3-211ENST00000568291 A0A1B0GU33 70 aa3.72□□□□□ -1.81
SF3B3-211ENST00000568291 SPINT4Q6UDR6 99 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms