RNA–Protein interactions for RNA: ENST00000568206.1

HERC2-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-210ENST00000568206 XP32Q5T750 250 aa10.32□□□□□ -0.76
HERC2-210ENST00000568206 RPL37P61927 97 aaKnown RBP10.31□□□□□ -0.76
HERC2-210ENST00000568206 TPRXLQ17RH7 258 aa10.28□□□□□ -0.76
HERC2-210ENST00000568206 J3QL48 77 aa10.26□□□□□ -0.77
HERC2-210ENST00000568206 HERC2O95714 4834 aa10.25□□□□□ -0.77
HERC2-210ENST00000568206 UQCR11O14957 56 aa10.23□□□□□ -0.77
HERC2-210ENST00000568206 MIR22HGQ0VDD5 57 aa10.21□□□□□ -0.78
HERC2-210ENST00000568206 ABCA13Q86UQ4 5058 aa10.19□□□□□ -0.78
HERC2-210ENST00000568206 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
HERC2-210ENST00000568206 ADM2Q7Z4H4 148 aa10.07□□□□□ -0.8
HERC2-210ENST00000568206 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
HERC2-210ENST00000568206 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
HERC2-210ENST00000568206 KRTAP3-1Q9BYR8 98 aa10□□□□□ -0.81
HERC2-210ENST00000568206 LRP2P98164 4655 aa9.94□□□□□ -0.82
HERC2-210ENST00000568206 LPAP08519 4548 aa9.94□□□□□ -0.82
HERC2-210ENST00000568206 SEC61BP60468 96 aaKnown RBP9.92□□□□□ -0.82
HERC2-210ENST00000568206 CSAG1Q6PB30 78 aa9.87□□□□□ -0.83
HERC2-210ENST00000568206 H1FX-AS1Q4G0G2 97 aa9.74□□□□□ -0.85
HERC2-210ENST00000568206 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
HERC2-210ENST00000568206 H0YAA0 97 aa9.73□□□□□ -0.85
HERC2-210ENST00000568206 S4R3F8 94 aa9.72□□□□□ -0.85
HERC2-210ENST00000568206 A0A1B0GU33 70 aa9.7□□□□□ -0.86
HERC2-210ENST00000568206 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
HERC2-210ENST00000568206 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
HERC2-210ENST00000568206 MUC17Q685J3 4493 aa9.62□□□□□ -0.87
HERC2-210ENST00000568206 HERC1Q15751 4861 aa9.61□□□□□ -0.87
HERC2-210ENST00000568206 KRTAP4-1Q9BYQ7 146 aa9.61□□□□□ -0.87
HERC2-210ENST00000568206 HMCN2Q8NDA2 5059 aa9.56□□□□□ -0.88
HERC2-210ENST00000568206 K7ERS5 55 aa9.55□□□□□ -0.88
HERC2-210ENST00000568206 H3BS24 57 aa9.49□□□□□ -0.89
HERC2-210ENST00000568206 ROMO1P60602 79 aa9.43□□□□□ -0.9
HERC2-210ENST00000568206 KRTAP19-2Q3LHN2 52 aa9.39□□□□□ -0.91
HERC2-210ENST00000568206 KRTAP10-6P60371 365 aaPredicted RBP9.36□□□□□ -0.91
HERC2-210ENST00000568206 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
HERC2-210ENST00000568206 P0C880 135 aa9.25□□□□□ -0.93
HERC2-210ENST00000568206 MUC2Q02817 5179 aa9.24□□□□□ -0.93
HERC2-210ENST00000568206 CRIPTQ9P021 101 aa9.19□□□□□ -0.94
HERC2-210ENST00000568206 FLGP20930 4061 aaPredicted RBP9.13□□□□□ -0.95
HERC2-210ENST00000568206 KRTAP13-4Q3LI77 160 aa9.12□□□□□ -0.95
HERC2-210ENST00000568206 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
HERC2-210ENST00000568206 M0QZ58 72 aa9.09□□□□□ -0.95
HERC2-210ENST00000568206 A0A0D9SG42 100 aa9.05□□□□□ -0.96
HERC2-210ENST00000568206 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.97
HERC2-210ENST00000568206 RNF213Q63HN8 5207 aa9□□□□□ -0.97
HERC2-210ENST00000568206 SPINT4Q6UDR6 99 aa8.98□□□□□ -0.97
HERC2-210ENST00000568206 R4GN34 69 aa8.97□□□□□ -0.97
HERC2-210ENST00000568206 MT1HP80294 61 aa8.93□□□□□ -0.98
HERC2-210ENST00000568206 M0R2T5 61 aa8.9□□□□□ -0.99
HERC2-210ENST00000568206 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
HERC2-210ENST00000568206 KRTAP12-2P59991 146 aa8.87□□□□□ -0.99
HERC2-210ENST00000568206 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
HERC2-210ENST00000568206 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
HERC2-210ENST00000568206 KRTAP15-1Q3LI76 137 aa8.85□□□□□ -0.99
HERC2-210ENST00000568206 KRTAP12-1P59990 96 aa8.84□□□□□ -0.99
HERC2-210ENST00000568206 NDUFAF8A1L188 74 aa8.67□□□□□ -1.02
HERC2-210ENST00000568206 KRTAP9-8Q9BYQ0 159 aa8.62□□□□□ -1.03
HERC2-210ENST00000568206 MT2AP02795 61 aa8.61□□□□□ -1.03
HERC2-210ENST00000568206 KRTAP10-10P60014 251 aa8.58□□□□□ -1.04
HERC2-210ENST00000568206 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
HERC2-210ENST00000568206 MT1FP04733 61 aa8.56□□□□□ -1.04
HERC2-210ENST00000568206 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
HERC2-210ENST00000568206 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
HERC2-210ENST00000568206 LCE2AQ5TA79 106 aaPredicted RBP8.42□□□□□ -1.06
HERC2-210ENST00000568206 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
HERC2-210ENST00000568206 KRTAP19-8Q3LI54 63 aa8.3□□□□□ -1.08
HERC2-210ENST00000568206 KRTAP9-3Q9BYQ3 159 aa8.3□□□□□ -1.08
HERC2-210ENST00000568206 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
HERC2-210ENST00000568206 MT1BP07438 61 aa8.15□□□□□ -1.1
HERC2-210ENST00000568206 TNP1P09430 55 aa8.07□□□□□ -1.12
HERC2-210ENST00000568206 LUZP6Q538Z0 58 aa8.05□□□□□ -1.12
HERC2-210ENST00000568206 LCE2BO14633 110 aa8.02□□□□□ -1.13
HERC2-210ENST00000568206 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.13
HERC2-210ENST00000568206 MT1XP80297 61 aa7.95□□□□□ -1.14
HERC2-210ENST00000568206 KRTAP10-5P60370 271 aa7.93□□□□□ -1.14
HERC2-210ENST00000568206 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.14
HERC2-210ENST00000568206 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
HERC2-210ENST00000568206 SPRR5A0A1B0GTR4 108 aa7.76□□□□□ -1.17
HERC2-210ENST00000568206 USH2AO75445 5202 aa7.67□□□□□ -1.18
HERC2-210ENST00000568206 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
HERC2-210ENST00000568206 KRTAP10-12P60413 245 aa7.63□□□□□ -1.19
HERC2-210ENST00000568206 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
HERC2-210ENST00000568206 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
HERC2-210ENST00000568206 KRTAP19-6Q3LI70 58 aa7.51□□□□□ -1.21
HERC2-210ENST00000568206 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
HERC2-210ENST00000568206 SSPOA2VEC9 5147 aa7.47□□□□□ -1.21
HERC2-210ENST00000568206 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
HERC2-210ENST00000568206 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
HERC2-210ENST00000568206 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
HERC2-210ENST00000568206 FSIP2Q5CZC0 6907 aa7.25□□□□□ -1.25
HERC2-210ENST00000568206 KRTAP19-5Q3LI72 72 aa7.22□□□□□ -1.25
HERC2-210ENST00000568206 KRTAP9-2Q9BYQ4 174 aa7.17□□□□□ -1.26
HERC2-210ENST00000568206 INE1O15225 51 aa7.16□□□□□ -1.26
HERC2-210ENST00000568206 KMT2DO14686 5537 aa7.15□□□□□ -1.27
HERC2-210ENST00000568206 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
HERC2-210ENST00000568206 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
HERC2-210ENST00000568206 CRCT1Q9UGL9 99 aa6.96□□□□□ -1.3
HERC2-210ENST00000568206 MT1EP04732 61 aa6.95□□□□□ -1.3
HERC2-210ENST00000568206 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
HERC2-210ENST00000568206 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
HERC2-210ENST00000568206 MT1LQ93083 61 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms