RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 LINC00208Q96KT6 92 aa3.13□□□□□ -1.91
SF3B3-210ENST00000567654 DMBT1Q9UGM3 2413 aaPredicted RBP3.13□□□□□ -1.91
SF3B3-210ENST00000567654 TRAV22A0A0B4J277 110 aa3.12□□□□□ -1.91
SF3B3-210ENST00000567654 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
SF3B3-210ENST00000567654 LRP2P98164 4655 aa3.11□□□□□ -1.91
SF3B3-210ENST00000567654 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
SF3B3-210ENST00000567654 TP53AIP1Q9HCN2 124 aa3.11□□□□□ -1.91
SF3B3-210ENST00000567654 OXTP01178 125 aa3.1□□□□□ -1.91
SF3B3-210ENST00000567654 MP68P56378 58 aa3.1□□□□□ -1.91
SF3B3-210ENST00000567654 TMEM258P61165 79 aa3.1□□□□□ -1.91
SF3B3-210ENST00000567654 C1orf64Q8NEQ6 169 aa3.1□□□□□ -1.91
SF3B3-210ENST00000567654 MUC17Q685J3 4493 aa3.09□□□□□ -1.91
SF3B3-210ENST00000567654 FAM236DA0A1B0GTK5 79 aa3.09□□□□□ -1.91
SF3B3-210ENST00000567654 FAM236CP0DP71 79 aa3.09□□□□□ -1.91
SF3B3-210ENST00000567654 A8MUU9 505 aa3.08□□□□□ -1.92
SF3B3-210ENST00000567654 H3BPC8 53 aa3.08□□□□□ -1.92
SF3B3-210ENST00000567654 NDUFC1O43677 76 aa3.08□□□□□ -1.92
SF3B3-210ENST00000567654 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
SF3B3-210ENST00000567654 PCOTHQ58A44 107 aa3.08□□□□□ -1.92
SF3B3-210ENST00000567654 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
SF3B3-210ENST00000567654 PRR4Q16378 134 aa3.07□□□□□ -1.92
SF3B3-210ENST00000567654 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
SF3B3-210ENST00000567654 C20orf166-AS1Q96NR2 134 aa3.07□□□□□ -1.92
SF3B3-210ENST00000567654 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
SF3B3-210ENST00000567654 FP248Q71RG6 208 aaPredicted RBP3.05□□□□□ -1.92
SF3B3-210ENST00000567654 CYP4F30PQ9H0H9 118 aa3.05□□□□□ -1.92
SF3B3-210ENST00000567654 HERC1Q15751 4861 aa3.05□□□□□ -1.92
SF3B3-210ENST00000567654 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
SF3B3-210ENST00000567654 HRES1P13985 223 aa3.02□□□□□ -1.93
SF3B3-210ENST00000567654 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
SF3B3-210ENST00000567654 RPL37P61927 97 aaKnown RBP3.02□□□□□ -1.93
SF3B3-210ENST00000567654 SPANXA2-OT1Q8N9U9 137 aa3.02□□□□□ -1.93
SF3B3-210ENST00000567654 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
SF3B3-210ENST00000567654 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
SF3B3-210ENST00000567654 RPS28P62857 69 aaKnown RBP3□□□□□ -1.93
SF3B3-210ENST00000567654 TPRXLQ17RH7 258 aa2.99□□□□□ -1.93
SF3B3-210ENST00000567654 C7orf65Q6ZTY9 151 aa2.99□□□□□ -1.93
SF3B3-210ENST00000567654 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
SF3B3-210ENST00000567654 SPINK7P58062 85 aa2.97□□□□□ -1.93
SF3B3-210ENST00000567654 COA5Q86WW8 74 aa2.97□□□□□ -1.93
SF3B3-210ENST00000567654 C4orf26Q17RF5 130 aa2.96□□□□□ -1.94
SF3B3-210ENST00000567654 DMAC1Q96GE9 116 aa2.96□□□□□ -1.94
SF3B3-210ENST00000567654 ATP11AUNQ6ZP68 121 aa2.95□□□□□ -1.94
SF3B3-210ENST00000567654 SMIM26A0A096LP01 95 aa2.93□□□□□ -1.94
SF3B3-210ENST00000567654 KRTAP4-1Q9BYQ7 146 aa2.93□□□□□ -1.94
SF3B3-210ENST00000567654 ACYP2P14621 99 aa2.91□□□□□ -1.94
SF3B3-210ENST00000567654 UBR4Q5T4S7 5183 aa2.9□□□□□ -1.94
SF3B3-210ENST00000567654 COX6B2Q6YFQ2 88 aa2.9□□□□□ -1.95
SF3B3-210ENST00000567654 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
SF3B3-210ENST00000567654 A8MUN3 132 aa2.87□□□□□ -1.95
SF3B3-210ENST00000567654 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
SF3B3-210ENST00000567654 Q1T7F1 81 aa2.87□□□□□ -1.95
SF3B3-210ENST00000567654 CHKB-CPT1BH3BT56 60 aa2.86□□□□□ -1.95
SF3B3-210ENST00000567654 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
SF3B3-210ENST00000567654 PSPHP1O15172 72 aa2.85□□□□□ -1.95
SF3B3-210ENST00000567654 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
SF3B3-210ENST00000567654 MUC2Q02817 5179 aa2.84□□□□□ -1.95
SF3B3-210ENST00000567654 Q5VV11 94 aa2.84□□□□□ -1.95
SF3B3-210ENST00000567654 LINC01558Q9Y6Z2 57 aa2.84□□□□□ -1.95
SF3B3-210ENST00000567654 LCA10Q71F78 164 aa2.83□□□□□ -1.96
SF3B3-210ENST00000567654 PRR15LQ9BU68 103 aa2.83□□□□□ -1.96
SF3B3-210ENST00000567654 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SF3B3-210ENST00000567654 S4R3F8 94 aa2.81□□□□□ -1.96
SF3B3-210ENST00000567654 H1FX-AS1Q4G0G2 97 aa2.8□□□□□ -1.96
SF3B3-210ENST00000567654 RBM12B-AS1Q9P1G2 102 aa2.8□□□□□ -1.96
SF3B3-210ENST00000567654 V9GYY9 64 aa2.8□□□□□ -1.96
SF3B3-210ENST00000567654 A8MU10 97 aa2.79□□□□□ -1.96
SF3B3-210ENST00000567654 FAT4Q6V0I7 4981 aa2.78□□□□□ -1.96
SF3B3-210ENST00000567654 A0A1B0GU69 56 aa2.77□□□□□ -1.97
SF3B3-210ENST00000567654 SPTSSBQ8NFR3 76 aa2.75□□□□□ -1.97
SF3B3-210ENST00000567654 BRK1Q8WUW1 75 aa2.74□□□□□ -1.97
SF3B3-210ENST00000567654 A6NED7 52 aa2.73□□□□□ -1.97
SF3B3-210ENST00000567654 P0C880 135 aa2.72□□□□□ -1.97
SF3B3-210ENST00000567654 H0YAA0 97 aa2.7□□□□□ -1.98
SF3B3-210ENST00000567654 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
SF3B3-210ENST00000567654 KRTAP13-4Q3LI77 160 aa2.7□□□□□ -1.98
SF3B3-210ENST00000567654 CSAG1Q6PB30 78 aa2.7□□□□□ -1.98
SF3B3-210ENST00000567654 ADM2Q7Z4H4 148 aa2.7□□□□□ -1.98
SF3B3-210ENST00000567654 SEC61GP60059 68 aa2.69□□□□□ -1.98
SF3B3-210ENST00000567654 A0A1B0GU33 70 aa2.68□□□□□ -1.98
SF3B3-210ENST00000567654 MT1HP80294 61 aa2.68□□□□□ -1.98
SF3B3-210ENST00000567654 SPATA8Q6RVD6 105 aa2.68□□□□□ -1.98
SF3B3-210ENST00000567654 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
SF3B3-210ENST00000567654 UQCR11O14957 56 aa2.67□□□□□ -1.98
SF3B3-210ENST00000567654 MIR22HGQ0VDD5 57 aa2.67□□□□□ -1.98
SF3B3-210ENST00000567654 PRO0628Q9UI54 55 aa2.66□□□□□ -1.98
SF3B3-210ENST00000567654 A0A0D9SG42 100 aa2.6□□□□□ -1.99
SF3B3-210ENST00000567654 A6NN06 94 aa2.6□□□□□ -1.99
SF3B3-210ENST00000567654 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
SF3B3-210ENST00000567654 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
SF3B3-210ENST00000567654 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
SF3B3-210ENST00000567654 M0QZ58 72 aa2.58□□□□□ -2
SF3B3-210ENST00000567654 M0R2T5 61 aa2.58□□□□□ -2
SF3B3-210ENST00000567654 MT2AP02795 61 aa2.58□□□□□ -2
SF3B3-210ENST00000567654 MT1FP04733 61 aa2.58□□□□□ -2
SF3B3-210ENST00000567654 KRTAP12-1P59990 96 aa2.57□□□□□ -2
SF3B3-210ENST00000567654 R4GN34 69 aa2.56□□□□□ -2
SF3B3-210ENST00000567654 PMAIP1Q13794 54 aa2.55□□□□□ -2
SF3B3-210ENST00000567654 LINC01554Q52M75 96 aa2.55□□□□□ -2
SF3B3-210ENST00000567654 SPINT4Q6UDR6 99 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms