RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 H3BPC8 53 aa10.01□□□□□ -0.81
NME3-210ENST00000567271 A8MUN3 132 aa9.97□□□□□ -0.81
NME3-210ENST00000567271 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
NME3-210ENST00000567271 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
NME3-210ENST00000567271 FCGBPQ9Y6R7 5405 aaPredicted RBP9.91□□□□□ -0.82
NME3-210ENST00000567271 KRTAP19-1Q8IUB9 90 aa9.89□□□□□ -0.83
NME3-210ENST00000567271 NDUFC1O43677 76 aa9.88□□□□□ -0.83
NME3-210ENST00000567271 SMIM20Q8N5G0 67 aa9.87□□□□□ -0.83
NME3-210ENST00000567271 TRAV7A0A075B6U4 112 aa9.85□□□□□ -0.83
NME3-210ENST00000567271 KRTAP19-6Q3LI70 58 aa9.77□□□□□ -0.85
NME3-210ENST00000567271 DMAC1Q96GE9 116 aa9.77□□□□□ -0.85
NME3-210ENST00000567271 SPRR2GQ9BYE4 73 aa9.76□□□□□ -0.85
NME3-210ENST00000567271 H0YAA0 97 aa9.74□□□□□ -0.85
NME3-210ENST00000567271 CRIPTQ9P021 101 aa9.69□□□□□ -0.86
NME3-210ENST00000567271 KRTAP19-8Q3LI54 63 aa9.66□□□□□ -0.86
NME3-210ENST00000567271 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.65□□□□□ -0.86
NME3-210ENST00000567271 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
NME3-210ENST00000567271 MT1BP07438 61 aa9.62□□□□□ -0.87
NME3-210ENST00000567271 Q5VV11 94 aa9.62□□□□□ -0.87
NME3-210ENST00000567271 SNURFQ9Y675 71 aa9.62□□□□□ -0.87
NME3-210ENST00000567271 SERP2Q8N6R1 65 aa9.61□□□□□ -0.87
NME3-210ENST00000567271 MACF1Q9UPN3 7388 aaKnown RBP9.61□□□□□ -0.87
NME3-210ENST00000567271 ACYP2P14621 99 aa9.59□□□□□ -0.87
NME3-210ENST00000567271 C20orf197Q8N268 126 aa9.55□□□□□ -0.88
NME3-210ENST00000567271 SYNE2Q8WXH0 6885 aaKnown RBP9.53□□□□□ -0.88
NME3-210ENST00000567271 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
NME3-210ENST00000567271 P0C880 135 aa9.46□□□□□ -0.9
NME3-210ENST00000567271 KRTAP9-7A8MTY7 169 aa9.45□□□□□ -0.9
NME3-210ENST00000567271 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
NME3-210ENST00000567271 SPTSSBQ8NFR3 76 aa9.41□□□□□ -0.9
NME3-210ENST00000567271 A6NN06 94 aa9.4□□□□□ -0.9
NME3-210ENST00000567271 CHKB-CPT1BH3BT56 60 aa9.4□□□□□ -0.9
NME3-210ENST00000567271 COX7CP15954 63 aa9.38□□□□□ -0.91
NME3-210ENST00000567271 R4GN34 69 aa9.36□□□□□ -0.91
NME3-210ENST00000567271 KRTAP10-5P60370 271 aa9.35□□□□□ -0.91
NME3-210ENST00000567271 M0QZ58 72 aa9.3□□□□□ -0.92
NME3-210ENST00000567271 PLAC4Q8WY50 150 aa9.2□□□□□ -0.94
NME3-210ENST00000567271 CYSTM1Q9H1C7 97 aa9.2□□□□□ -0.94
NME3-210ENST00000567271 H7BZZ5 65 aa9.18□□□□□ -0.94
NME3-210ENST00000567271 COA5Q86WW8 74 aa9.18□□□□□ -0.94
NME3-210ENST00000567271 ANAPC13Q9BS18 74 aa9.16□□□□□ -0.94
NME3-210ENST00000567271 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
NME3-210ENST00000567271 KRTAP6-3Q3LI67 103 aa9.13□□□□□ -0.95
NME3-210ENST00000567271 MT1XP80297 61 aa9.08□□□□□ -0.96
NME3-210ENST00000567271 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
NME3-210ENST00000567271 CCDC179H3BU77 68 aa8.99□□□□□ -0.97
NME3-210ENST00000567271 MUC12Q9UKN1 5478 aa8.95□□□□□ -0.98
NME3-210ENST00000567271 KRTAP13-4Q3LI77 160 aa8.94□□□□□ -0.98
NME3-210ENST00000567271 KMT2DO14686 5537 aa8.93□□□□□ -0.98
NME3-210ENST00000567271 NEBP20929 6669 aa8.93□□□□□ -0.98
NME3-210ENST00000567271 SEC61GP60059 68 aa8.92□□□□□ -0.98
NME3-210ENST00000567271 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
NME3-210ENST00000567271 KRTAP12-2P59991 146 aa8.82□□□□□ -1
NME3-210ENST00000567271 KRTAP5-9P26371 169 aa8.81□□□□□ -1
NME3-210ENST00000567271 ATP5EP56381 51 aaPredicted RBP8.78□□□□□ -1
NME3-210ENST00000567271 A0A1B0GU33 70 aa8.77□□□□□ -1.01
NME3-210ENST00000567271 MDN1Q9NU22 5596 aa8.75□□□□□ -1.01
NME3-210ENST00000567271 SPATA8Q6RVD6 105 aa8.72□□□□□ -1.01
NME3-210ENST00000567271 A0A1B0GU69 56 aa8.7□□□□□ -1.02
NME3-210ENST00000567271 A0A0D9SG42 100 aa8.68□□□□□ -1.02
NME3-210ENST00000567271 KRTAP10-7P60409 375 aaPredicted RBP8.68□□□□□ -1.02
NME3-210ENST00000567271 TMEM258P61165 79 aa8.65□□□□□ -1.02
NME3-210ENST00000567271 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
NME3-210ENST00000567271 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
NME3-210ENST00000567271 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
NME3-210ENST00000567271 KRTAP4-8A0A0G2JLE6 195 aa8.62□□□□□ -1.03
NME3-210ENST00000567271 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
NME3-210ENST00000567271 SPRR2FQ96RM1 72 aa8.59□□□□□ -1.03
NME3-210ENST00000567271 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
NME3-210ENST00000567271 KRTAP12-1P59990 96 aa8.52□□□□□ -1.05
NME3-210ENST00000567271 SMIM26A0A096LP01 95 aa8.51□□□□□ -1.05
NME3-210ENST00000567271 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
NME3-210ENST00000567271 LINC01558Q9Y6Z2 57 aa8.51□□□□□ -1.05
NME3-210ENST00000567271 A8MU10 97 aa8.44□□□□□ -1.06
NME3-210ENST00000567271 SPRR2EP22531 72 aa8.4□□□□□ -1.06
NME3-210ENST00000567271 SPRR2BP35325 72 aa8.4□□□□□ -1.06
NME3-210ENST00000567271 SPRR2AP35326 72 aa8.4□□□□□ -1.06
NME3-210ENST00000567271 LCE1AQ5T7P2 110 aa8.34□□□□□ -1.07
NME3-210ENST00000567271 KRTAP20-1Q3LI63 56 aa8.31□□□□□ -1.08
NME3-210ENST00000567271 UQCR11O14957 56 aa8.24□□□□□ -1.09
NME3-210ENST00000567271 KRTAP2-3P0C7H8 128 aa8.18□□□□□ -1.1
NME3-210ENST00000567271 KRTAP2-4Q9BYR9 128 aa8.18□□□□□ -1.1
NME3-210ENST00000567271 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
NME3-210ENST00000567271 V9GYY9 64 aa8.14□□□□□ -1.11
NME3-210ENST00000567271 SPRR2DP22532 72 aa8.12□□□□□ -1.11
NME3-210ENST00000567271 KRTAP19-7Q3SYF9 63 aa8.12□□□□□ -1.11
NME3-210ENST00000567271 Q1T7F1 81 aa8.11□□□□□ -1.11
NME3-210ENST00000567271 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
NME3-210ENST00000567271 PSPHP1O15172 72 aa8.06□□□□□ -1.12
NME3-210ENST00000567271 MT1EP04732 61 aa8.04□□□□□ -1.12
NME3-210ENST00000567271 TNP1P09430 55 aa8.04□□□□□ -1.12
NME3-210ENST00000567271 PCP4P48539 62 aa8.02□□□□□ -1.13
NME3-210ENST00000567271 KRTAP19-5Q3LI72 72 aa7.98□□□□□ -1.13
NME3-210ENST00000567271 KRTAP2-2Q9BYT5 123 aa7.94□□□□□ -1.14
NME3-210ENST00000567271 KRTAP2-1Q9BYU5 128 aa7.94□□□□□ -1.14
NME3-210ENST00000567271 RPS28P62857 69 aaKnown RBP7.92□□□□□ -1.14
NME3-210ENST00000567271 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
NME3-210ENST00000567271 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
NME3-210ENST00000567271 KRTAP19-3Q7Z4W3 81 aa7.91□□□□□ -1.14
NME3-210ENST00000567271 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms